RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 OR10G7Q8NGN6 311 aa17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 H1FXQ92522 213 aaKnown RBP17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 LHX4Q969G2 390 aa17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 C20orf24Q9BUV8 137 aa17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 VAX2Q9UIW0 290 aa17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 RP1L1Q8IWN7 2480 aaPredicted RBP17.5■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 IGHV1-69-2A0A0G2JMI3 117 aa17.49■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 ZFP92A6NM28 416 aa17.49■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 H3BQ15 152 aa17.49■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 SSX7Q7RTT5 188 aa17.49■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 C8orf31Q8N9H6 132 aa17.49■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 BOD1L1Q8NFC6 3051 aa17.49■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 AKR1C3P42330 323 aa17.48■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 CEBPGP53567 150 aa17.48■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 FGF8P55075 233 aaPredicted RBP17.48■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 DLK1P80370 383 aa17.48■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 ACOT6Q3I5F7 207 aaPredicted RBP17.48■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 OR13D1Q8NGV5 346 aa17.48■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 NIPSNAP3BQ9BS92 247 aa17.48■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 CYB5BO43169 146 aa17.48■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 APOA2P02652 100 aa17.48■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 FOLR2P14207 255 aa17.48■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 FAM71F2Q6NXP2 309 aa17.48■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 SLC35E3Q7Z769 313 aa17.48■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 TVP23CQ96ET8 276 aa17.48■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 ZNF257Q9Y2Q1 563 aa17.48■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 DVL1O14640 695 aa17.47■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 IGKV1D-33P01593 117 aa17.47■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 IGKV1-33P01594 117 aa17.47■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 MT-ND4LP03901 98 aa17.47■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 CCL3L1P16619 93 aa17.47■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 LYPD2Q6UXB3 125 aa17.47■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 LINC01560Q8TB33 94 aa17.47■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 OR51B2Q9Y5P1 312 aa17.47■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 UPK2O00526 184 aa17.46■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 IL6RP08887 468 aaPredicted RBP17.46■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 LINC00311Q8N616 119 aa17.46■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 OSR1Q8TAX0 266 aaPredicted RBP17.46■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 KCNIP2Q9NS61 270 aa17.46■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 FKBP11Q9NYL4 201 aa17.46■□□□□ 0.39
VPS9D1-AS1-202ENST00000562866 RRHO14718 337 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 NDUFS6O75380 124 aaKnown RBP17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 IFNA4P05014 189 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 FBP1P09467 338 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 CTRB1P17538 263 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 HNF4GQ14541 408 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 SMUG1Q53HV7 270 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 CTRB2Q6GPI1 263 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 ZNF596Q8TC21 504 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 DIDO1Q9BTC0 2240 aaKnown RBP17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 SMCO3A2RU48 225 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 PRSS46E5RG02 174 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 FCN3O75636 299 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 CRYBA1P05813 215 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 NPY1RP25929 384 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 LOXP28300 417 aaPredicted RBP17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 RNF212Q495C1 297 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 ABHD12Q8N2K0 398 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 SLC24A4Q8NFF2 622 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 SLC25A22Q9H936 323 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 MANBALQ9NQG1 85 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 BET1LQ9NYM9 111 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 CTSZQ9UBR2 303 aa17.45■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 A0A087WWC5 75 aa17.44■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 TRBV23-1A0A0A0MS06 115 aa17.44■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 PSMB3P49720 205 aa17.44■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 ATP5IP56385 69 aaPredicted RBP17.44■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 OR10X1Q8NGY0 326 aa17.44■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 CA5BP1Q8WTZ4 195 aa17.44■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 HIST1H2BAQ96A08 127 aa17.44■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 TMEM186Q96B77 213 aa17.44■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 PTPRQQ9UMZ3 2332 aa17.44■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 HCFC1P51610 2035 aa17.44■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 B4DEV8 164 aa17.43■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 KBTBD11O94819 623 aa17.43■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 FSTL3O95633 263 aa17.43■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 OPRK1P41145 380 aa17.43■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 TMEM155Q4W5P6 130 aa17.43■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 MUC15Q8N387 334 aa17.43■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 MRPL20Q9BYC9 149 aaKnown RBP17.43■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 PLEKHA3Q9HB20 300 aa17.43■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 DCHS1Q96JQ0 3298 aa17.43■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 J3QR06 171 aa17.43■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 PLAUP00749 431 aa17.43■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 PRCDQ00LT1 54 aa17.43■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 PNRC1Q12796 327 aaPredicted RBP17.43■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 ZNF672Q499Z4 452 aaPredicted RBP17.43■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 FAM90A2PQ658T7 463 aa17.43■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 OR5AN1Q8NGI8 311 aa17.43■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 RAB24Q969Q5 203 aa17.43■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 ICE1Q9Y2F5 2266 aa17.42■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 SPTBN2O15020 2390 aa17.42■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 A0A087X0M5 115 aa17.42■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 A0A1B0GX30 115 aa17.42■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 SEC14L6B5MCN3 397 aa17.42■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 FNDC10F2Z333 226 aa17.42■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 OR2C1O95371 312 aa17.42■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 IGKV1-16P04430 117 aa17.42■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 CDC34P49427 236 aaPredicted RBP17.42■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 DLX6P56179 175 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms