RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 DNAH7Q8WXX0 4024 aa8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 C13orf42A0A1B0GVH6 325 aa8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 AREGP15514 252 aa8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 HLA-DMAP28067 261 aa8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 PRSS3P35030 304 aa8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 HRH1P35367 487 aa8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 ALDH3B2P48448 385 aa8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 INSL3P51460 131 aa8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 GPR107Q5VW38 600 aa8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 OR4A47Q6IF82 309 aa8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 ZNF429Q86V71 674 aa8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 SNX29P2Q8IUI4 249 aa8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 TTC9CQ8N5M4 171 aa8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 ZBTB34Q8NCN2 500 aa8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 OR51H1Q8NH63 302 aa8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 MOB3AQ96BX8 217 aa8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 RANGRFQ9HD47 186 aaPredicted RBP8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 DMRT1Q9Y5R6 373 aa8.48□□□□□ -1.05
LPCAT4-202ENST00000562404 A0A0G2JLM5 398 aa8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 MPPED1O15442 326 aa8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 OR2J3O76001 311 aa8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 S1PR2O95136 353 aa8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 LY86O95711 162 aa8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 APOA1P02647 267 aa8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 ZNF735P0CB33 412 aa8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 RPA2P15927 270 aa8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 RPL27AP46776 148 aaKnown RBP8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 SYNJ2BPP57105 145 aa8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 RHOGP84095 191 aa8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 CD69Q07108 199 aa8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 KLF5Q13887 457 aaPredicted RBP8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 FANCD2OSQ96PS1 177 aa8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 FYTTD1Q96QD9 318 aaKnown RBP8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 SPIN2AQ99865 258 aa8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 SPIN2BQ9BPZ2 258 aa8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 BET1LQ9NYM9 111 aa8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 PEF1Q9UBV8 284 aaKnown RBP8.47□□□□□ -1.05
LPCAT4-202ENST00000562404 KMT2CQ8NEZ4 4911 aaKnown RBP8.46□□□□□ -1.05
LPCAT4-202ENST00000562404 BMPR1BO00238 502 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 RBFOX2O43251 390 aaKnown RBP eCLIP8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 PGLYRP1O75594 196 aaPredicted RBP8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 ACTL6BO94805 426 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 NDUFB8O95169 186 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 RLN1P04808 185 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 REG1AP05451 166 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 EDN2P20800 178 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 KIR2DS2P43631 304 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 RORCP51449 518 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 HERV-K104P61576 105 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 EXOSC2Q13868 293 aaKnown RBP8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 SPCS2Q15005 226 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 POU2AF1Q16633 256 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 ZNF585BQ52M93 769 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 RNASE12Q5GAN4 147 aaKnown RBP8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 OR5H2Q8NGV7 314 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 VSTM2AQ8TAG5 236 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 USMG5Q96IX5 58 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 CMTM3Q96MX0 182 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 ASCL2Q99929 193 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 MIXL1Q9H2W2 232 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 SLC2A9Q9NRM0 540 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 ZMAT5Q9UDW3 170 aaKnown RBP8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 S4R3C0 116 aa8.46□□□□□ -1.06
LPCAT4-202ENST00000562404 PPP5D1E7EU14 171 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 UPK2O00526 184 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 CREBL2O60519 120 aaPredicted RBP8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 HPRT1P00492 218 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 HRASP01112 189 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 IGLV1-51P01701 117 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 IGHV3-23P01764 117 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 HLA-AP01891 365 aaKnown RBP8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 CRYGCP07315 174 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 CSN3P07498 182 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 GP9P14770 177 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 CTRB1P17538 263 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 HLA-GP17693 338 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 ZP3P21754 424 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 MAS1LP35410 378 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 TAS2R31P59538 309 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 TAS2R46P59540 309 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 OR2B8PP59922 312 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 RPL8P62917 257 aaKnown RBP8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 CATR1Q13166 79 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 VAX1Q5SQQ9 334 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 AADACL3Q5VUY0 350 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 CTRB2Q6GPI1 263 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 ADAMTSL5Q6ZMM2 481 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 OR9G4Q8NGQ1 327 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 FCAMRQ8WWV6 532 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 MRPS26Q9BYN8 205 aaKnown RBP8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 TMEM140Q9NV12 185 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 KLK11Q9UBX7 282 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 TENM3Q9P273 2699 aa8.45□□□□□ -1.06
LPCAT4-202ENST00000562404 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.44□□□□□ -1.06
LPCAT4-202ENST00000562404 IGLC7A0M8Q6 106 aa8.44□□□□□ -1.06
LPCAT4-202ENST00000562404 IZUMO1RA6ND01 250 aa8.44□□□□□ -1.06
LPCAT4-202ENST00000562404 FAM223BA6NKX1 122 aa8.44□□□□□ -1.06
LPCAT4-202ENST00000562404 NPIPB5A8MRT5 1133 aa8.44□□□□□ -1.06
LPCAT4-202ENST00000562404 FAM25AB3EWG3 89 aa8.44□□□□□ -1.06
LPCAT4-202ENST00000562404 FAM25CB3EWG5 89 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms