RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 SPATA2Q9UM82 520 aa8.65□□□□□ -1.02
NSMCE1-202ENST00000561960 MUC4Q99102 2169 aa8.65□□□□□ -1.03
NSMCE1-202ENST00000561960 IGKV3-7A0A075B6H7 116 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 IGKV1D-13A0A0B4J2D9 117 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 LGALS9O00182 355 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 TNFSF12O43508 249 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 XRCC3O43542 346 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 CLEC3BP05452 202 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 UCHL1P09936 223 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 IGKV1-13P0DP09 117 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 BMI1P35226 326 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 RPL27AP46776 148 aaKnown RBP8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 TFPI2P48307 235 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 OR10A3P58181 314 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 ODF3L2Q3SX64 289 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 FAM106AQ4KMX7 169 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 TTC23Q5W5X9 447 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 TMEM91Q6ZNR0 172 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 DHRSXQ8N5I4 330 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 TCTEX1D2Q8WW35 142 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 FAM3DQ96BQ1 224 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 RAB3CQ96E17 227 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 ZNF257Q9Y2Q1 563 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 AGRNO00468 2067 aa8.64□□□□□ -1.03
NSMCE1-202ENST00000561960 IGHV3-49A0A0A0MS15 119 aa8.63□□□□□ -1.03
NSMCE1-202ENST00000561960 CGB1A6NKQ9 187 aa8.63□□□□□ -1.03
NSMCE1-202ENST00000561960 CD1AP06126 327 aa8.63□□□□□ -1.03
NSMCE1-202ENST00000561960 RRASP10301 218 aa8.63□□□□□ -1.03
NSMCE1-202ENST00000561960 DEFA4P12838 97 aa8.63□□□□□ -1.03
NSMCE1-202ENST00000561960 CALRP27797 417 aaKnown RBP8.63□□□□□ -1.03
NSMCE1-202ENST00000561960 APOC4P55056 127 aa8.63□□□□□ -1.03
NSMCE1-202ENST00000561960 GPHB5Q86YW7 130 aa8.63□□□□□ -1.03
NSMCE1-202ENST00000561960 MMD2Q8IY49 270 aa8.63□□□□□ -1.03
NSMCE1-202ENST00000561960 H1FOOQ8IZA3 346 aaPredicted RBP8.63□□□□□ -1.03
NSMCE1-202ENST00000561960 C8orf59Q8N0T1 100 aaPredicted RBP8.63□□□□□ -1.03
NSMCE1-202ENST00000561960 OR2C3Q8N628 320 aa8.63□□□□□ -1.03
NSMCE1-202ENST00000561960 OR56B1Q8NGI3 324 aa8.63□□□□□ -1.03
NSMCE1-202ENST00000561960 EEF1AKMT3Q96AZ1 226 aa8.63□□□□□ -1.03
NSMCE1-202ENST00000561960 MND1Q9BWT6 205 aa8.63□□□□□ -1.03
NSMCE1-202ENST00000561960 TAS2R8Q9NYW2 309 aa8.63□□□□□ -1.03
NSMCE1-202ENST00000561960 LSM2Q9Y333 95 aaKnown RBP8.63□□□□□ -1.03
NSMCE1-202ENST00000561960 TRAV3A0A0B4J244 114 aa8.62□□□□□ -1.03
NSMCE1-202ENST00000561960 OR2T8A6NH00 312 aa8.62□□□□□ -1.03
NSMCE1-202ENST00000561960 A8MWP6 167 aa8.62□□□□□ -1.03
NSMCE1-202ENST00000561960 KBTBD11O94819 623 aa8.62□□□□□ -1.03
NSMCE1-202ENST00000561960 FCER2P06734 321 aa8.62□□□□□ -1.03
NSMCE1-202ENST00000561960 PTHLHP12272 177 aa8.62□□□□□ -1.03
NSMCE1-202ENST00000561960 PSMB6P28072 239 aa8.62□□□□□ -1.03
NSMCE1-202ENST00000561960 SERPINB10P48595 397 aa8.62□□□□□ -1.03
NSMCE1-202ENST00000561960 PSMD7P51665 324 aa8.62□□□□□ -1.03
NSMCE1-202ENST00000561960 ARFRP1Q13795 201 aa8.62□□□□□ -1.03
NSMCE1-202ENST00000561960 STPG3Q8N7X2 389 aa8.62□□□□□ -1.03
NSMCE1-202ENST00000561960 OSR1Q8TAX0 266 aaPredicted RBP8.62□□□□□ -1.03
NSMCE1-202ENST00000561960 RNF183Q96D59 192 aa8.62□□□□□ -1.03
NSMCE1-202ENST00000561960 C20orf24Q9BUV8 137 aa8.62□□□□□ -1.03
NSMCE1-202ENST00000561960 OR51E2Q9H255 320 aa8.62□□□□□ -1.03
NSMCE1-202ENST00000561960 NPIPB5A8MRT5 1133 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 IGLV2-14P01704 120 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 CDK1P06493 297 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 TALDO1P37837 337 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 BRWD1-AS2P59051 145 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 FABP5Q01469 135 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 SPHARQ15513 63 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 ANKRD55Q3KP44 614 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 LGALS9CQ6DKI2 356 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 SLC25A42Q86VD7 318 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 WFDC3Q8IUB2 231 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 MS4A15Q8N5U1 240 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 ZNF645Q8N7E2 425 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 OR10W1Q8NGF6 305 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 OR10R2Q8NGX6 335 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 UFD1Q92890 307 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 ADTRPQ96IZ2 230 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 OR2A7Q96R45 310 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 SLC2A9Q9NRM0 540 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 FKBP14Q9NWM8 211 aa8.61□□□□□ -1.03
NSMCE1-202ENST00000561960 IGHV3OR16-13A0A075B7E8 117 aa8.6□□□□□ -1.03
NSMCE1-202ENST00000561960 IGHV3-74A0A0B4J1X5 117 aa8.6□□□□□ -1.03
NSMCE1-202ENST00000561960 MFNGO00587 321 aa8.6□□□□□ -1.03
NSMCE1-202ENST00000561960 ZNF735P0CB33 412 aa8.6□□□□□ -1.03
NSMCE1-202ENST00000561960 CD37P11049 281 aa8.6□□□□□ -1.03
NSMCE1-202ENST00000561960 HIST1H1DP16402 221 aaKnown RBP8.6□□□□□ -1.03
NSMCE1-202ENST00000561960 MAP2K4P45985 399 aa8.6□□□□□ -1.03
NSMCE1-202ENST00000561960 TPBGQ13641 420 aa8.6□□□□□ -1.03
NSMCE1-202ENST00000561960 FAM209BQ5JX69 171 aa8.6□□□□□ -1.03
NSMCE1-202ENST00000561960 PLET1Q6UQ28 207 aa8.6□□□□□ -1.03
NSMCE1-202ENST00000561960 Q6ZWC4 215 aa8.6□□□□□ -1.03
NSMCE1-202ENST00000561960 SLC38A6Q8IZM9 456 aa8.6□□□□□ -1.03
NSMCE1-202ENST00000561960 UBAC2Q8NBM4 344 aa8.6□□□□□ -1.03
NSMCE1-202ENST00000561960 CD300LFQ8TDQ1 290 aa8.6□□□□□ -1.03
NSMCE1-202ENST00000561960 NUDCD2Q8WVJ2 157 aa8.6□□□□□ -1.03
NSMCE1-202ENST00000561960 HRASLSQ9HDD0 168 aa8.6□□□□□ -1.03
NSMCE1-202ENST00000561960 RBMX2Q9Y388 322 aaKnown RBP8.6□□□□□ -1.03
NSMCE1-202ENST00000561960 IGLV11-55A0A075B6I3 123 aa8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 IGLL5B9A064 214 aa8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 CREBL2O60519 120 aaPredicted RBP8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 CTSDP07339 412 aaPredicted RBP8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 RBMS2Q15434 407 aaKnown RBP8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 OR4A47Q6IF82 309 aa8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 PUSL1Q8N0Z8 303 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms