RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 SMIM12Q96EX1 92 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 BCL2L14Q9BZR8 327 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 RPUSD1Q9UJJ7 312 aaKnown RBP2.96□□□□□ -1.94
SMG1-204ENST00000561940 LINC00588Q9Y4M8 146 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 PUS1Q9Y606 427 aaKnown RBP eCLIP2.96□□□□□ -1.94
SMG1-204ENST00000561940 OTOGQ6ZRI0 2925 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 ATMQ13315 3056 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 TRBV24-1A0A075B6N3 115 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 A0A1B0GU33 70 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 SYNGR2O43760 224 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 SH2D1AO60880 128 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 CBR3O75828 277 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 LTAP01374 205 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 LGALS3P17931 250 aaKnown RBP2.95□□□□□ -1.94
SMG1-204ENST00000561940 CD40LGP29965 261 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 GTF2BQ00403 316 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 C10orf91Q5T1B1 145 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 SDHAF4Q5VUM1 108 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 FAM45BPQ6NSW5 357 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 EBLN2Q6P2I7 272 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 C2orf73Q8N5S3 287 aaPredicted RBP2.95□□□□□ -1.94
SMG1-204ENST00000561940 SUN5Q8TC36 379 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 OR5P3Q8WZ94 311 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 TCEAL4Q96EI5 215 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 ZNF286AQ9HBT8 521 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 EURLQ9NYK6 297 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 PSMD13Q9UNM6 376 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.95□□□□□ -1.94
SMG1-204ENST00000561940 LAMA1P25391 3075 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 MYH1P12882 1939 aa2.95□□□□□ -1.94
SMG1-204ENST00000561940 LRBAP50851 2863 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 LAMA4Q16363 1823 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 FOCADQ5VW36 1801 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 IGLV10-54A0A075B6I4 117 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 EEF1E1O43324 174 aaKnown RBP2.94□□□□□ -1.94
SMG1-204ENST00000561940 ORM1P02763 201 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 ZNF22P17026 224 aaPredicted RBP2.94□□□□□ -1.94
SMG1-204ENST00000561940 GRPRP30550 384 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 CCR2P41597 374 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 SULT1A2P50226 295 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 APOFQ13790 326 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 CENPWQ5EE01 88 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 HCP5Q6MZN7 132 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 SCXQ7RTU7 201 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 DOLPP1Q86YN1 238 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 YIPF7Q8N8F6 280 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 OR5L1Q8NGL2 311 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 ZNF514Q96K75 400 aaPredicted RBP2.94□□□□□ -1.94
SMG1-204ENST00000561940 CHST5Q9GZS9 411 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 WDR54Q9H977 334 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 CENPEQ02224 2701 aa2.94□□□□□ -1.94
SMG1-204ENST00000561940 MED13LQ71F56 2210 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 MED13Q9UHV7 2174 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 C1orf232A0A0U1RR37 186 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 ITGB1BP1O14713 200 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 SLC31A1O15431 190 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 SOX14O95416 240 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 UBE2G2P60604 165 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 PDGFRLQ15198 375 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 HENMT1Q5T8I9 393 aaKnown RBP2.93□□□□□ -1.94
SMG1-204ENST00000561940 VN1R4Q7Z5H5 301 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 MSRB3Q8IXL7 192 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 OR52E4Q8NGH9 312 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 CMTM2Q8TAZ6 248 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 GPR22Q99680 433 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 ZNF426Q9BUY5 554 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 METTL9Q9H1A3 318 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 SPANXB1Q9NS25 103 aaPredicted RBP2.93□□□□□ -1.94
SMG1-204ENST00000561940 C15orf41Q9Y2V0 281 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 CSPG4Q6UVK1 2322 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 PI4KAP42356 2102 aa2.93□□□□□ -1.94
SMG1-204ENST00000561940 RP1L1Q8IWN7 2480 aaPredicted RBP2.92□□□□□ -1.94
SMG1-204ENST00000561940 NIPBLQ6KC79 2804 aaeCLIP2.92□□□□□ -1.94
SMG1-204ENST00000561940 A0A0A6YYH2 397 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 FABP12A6NFH5 140 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 ARL5CA6NH57 179 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 A6NJ64 397 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 FTCDNL1E5RQL4 147 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 K7EQS6 105 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 TRAPPC3O43617 180 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 ATP6V1G2O95670 118 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 OR12D1P0DN82 309 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 PSKH1P11801 424 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 COILP38432 576 aaPredicted RBP2.92□□□□□ -1.94
SMG1-204ENST00000561940 MEF2BQ02080 365 aaPredicted RBP2.92□□□□□ -1.94
SMG1-204ENST00000561940 COTL1Q14019 142 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 NOXRED1Q6NXP6 359 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 NIT1Q86X76 327 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 PLCZ1Q86YW0 608 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 ZBTB8OSQ8IWT0 167 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 IQCF2Q8IXL9 164 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 OR5K1Q8NHB7 308 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 STOML3Q8TAV4 291 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 LMX1AQ8TE12 382 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 HIST1H2BAQ96A08 127 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 RBP7Q96R05 134 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 TMEM216Q9P0N5 145 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 MCTS1Q9ULC4 181 aaKnown RBP2.92□□□□□ -1.94
SMG1-204ENST00000561940 ATP6V1DQ9Y5K8 247 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 ATRQ13535 2644 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms