RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 ICAM4Q14773 271 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 INO80CQ6PI98 192 aaPredicted RBP8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 SPOCK3Q9BQ16 436 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 REPIN1Q9BWE0 567 aaKnown RBP8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 TTTY12Q9BZ98 90 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 WNT5BQ9H1J7 359 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 A0A1W2PQF6 199 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 CGAP01215 116 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 CCL8P80075 99 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 CYP2G1PQ6ZSU1 146 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 FAM90A10PA6NDY2 464 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 FAM90A18PA6NE21 464 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 FAM90A16PA6NEW6 464 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 FAM90A20PA6NIJ5 464 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 FAM90A8PA6NJQ4 464 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 FAM90A7PA6NKC0 464 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 FAM90A22PA8MWA6 464 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 FAM90A12PA8MX19 464 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 FAM90A5PA8MXJ8 464 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 FAM90A23PA8MXZ1 464 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 MGST3O14880 152 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 FAM90A15PP0C7V4 464 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 FAM90A13PP0C7W8 464 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 FAM90A14PP0C7W9 464 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 FAM90A24PP0C7X0 464 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 HTN3P15516 51 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 FCGR2BP31994 310 aaPredicted RBP8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 MPV17P39210 176 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 HBBP68871 147 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 LCN2P80188 198 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 LY6EQ16553 131 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 PMCHL2Q9BQD1 86 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 HILPDAQ9Y5L2 63 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 TRAV8-6A0A0B4J262 113 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 ADMP35318 185 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 RIPPLY3P57055 190 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 C1orf162Q8NEQ5 155 aaPredicted RBP8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 TMEM160Q9NX00 188 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 LAMTOR2Q9Y2Q5 125 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 A0A1B0GTI1 187 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 ZNF714Q96N38 554 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 TMEM74BQ9NUR3 256 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 TCF19Q9Y242 345 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 TMEM229AB2RXF0 380 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 IL6RP08887 468 aaPredicted RBP8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 METRNQ9UJH8 293 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 MARF1Q9Y4F3 1742 aaKnown RBP8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 IGKV1D-43A0A0B4J1Z2 117 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 PRSS2P07478 247 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 TIMP4Q99727 224 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 HEXA-AS1Q9H8Q6 139 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 MYO16Q9Y6X6 1858 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 RGPD4Q7Z3J3 1758 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 IGHV4-34P06331 123 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 COX6CP09669 75 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 HSPE1P61604 102 aaKnown RBP8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 RPL23P62829 140 aaKnown RBP8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 GOLT1AQ6ZVE7 132 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 ZNF501Q96CX3 271 aaPredicted RBP8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 SPTBN2O15020 2390 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 H0YIZ8 118 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 ANOS1P23352 680 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 SLC25A53Q5H9E4 307 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 TMEM78Q5T7P6 136 aa8.7□□□□□ -1.02
GTF3C1-202ENST00000561623 STRCP1A6NGW2 1772 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 MUC21A0A0G2JKD1 596 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 MUC21A0A140T8X8 626 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 TGFAP01135 160 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 IL4P05112 153 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 SELENOTP62341 195 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 MUC21Q5SSG8 566 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 SRXN1Q9BYN0 137 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 OTOFQ9HC10 1997 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 PROB1E7EW31 1015 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 RBFOX2O43251 390 aaKnown RBP eCLIP8.69□□□□□ -1.022e-8■□□□□ 10.9
GTF3C1-202ENST00000561623 GREM1O60565 184 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 PDLIM4P50479 330 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 PEAR1Q5VY43 1037 aaPredicted RBP8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 MRAP2Q96G30 205 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 SPCS1Q9Y6A9 102 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 IGKV3D-15A0A087WSY6 115 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 MOSP00540 346 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 IGKV3-15P01624 115 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 LGALS3P17931 250 aaKnown RBP8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 CTHRC1Q96CG8 243 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 DMRTA2Q96SC8 542 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 DERL1Q9BUN8 251 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 CCL20P78556 96 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 ZNF414Q96IQ9 312 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 WDR54Q9H977 334 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 CLDN16Q9Y5I7 305 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 PIKFYVEQ9Y2I7 2098 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 A0A1B0GWB2 263 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 COLCA2A8K830 154 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 C21orf140B9A014 251 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 IGHMP01871 453 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 LIPFP07098 398 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 NEUROG3Q9Y4Z2 214 aa8.69□□□□□ -1.02
GTF3C1-202ENST00000561623 CA1P00915 261 aaPredicted RBP8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 PRSS8Q16651 343 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms