RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 NOTCH3Q9UM47 2321 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 A0A087WWC5 75 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 IGHV2-26A0A0B4J1V2 119 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 FAM230AA0A1W2PPH8 454 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 A0A1W2PRD5 423 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 A0A1W2PRF3 423 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 A0A1W2PRM7 423 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 A6NDX4 124 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 CXorf65A6NEN9 183 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 NPIPB11E5RHQ5 1161 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 M0QZ24 198 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 MGST3O14880 152 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 ST8SIA3O43173 380 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 TGOLN2O43493 480 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 PDCD6O75340 191 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 IGLV1-47P01700 117 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 SMIM6P0DI80 62 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 CGB3P0DN86 165 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 CGB7P0DN87 165 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 ADCYAP1P18509 176 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 SNCAP37840 140 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 GLP1RP43220 463 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 KCNJ3P48549 501 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 MTCP1P56278 107 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 RAB5BP61020 215 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 TMEM187Q14656 261 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 KIR2DS1Q14954 304 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 MPV17LQ2QL34 196 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 IAH1Q2TAA2 248 aaPredicted RBP5.53□□□□□ -1.52
SPG11-224ENST00000561268 LRRC37A5PQ49AS3 106 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 SLC35E4Q6ICL7 350 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 Q6P435 159 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 ATRAIDQ6UW56 229 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 HEPN1Q6WQI6 88 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 RNF144BQ7Z419 303 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 BATF2Q8N1L9 274 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 CORO2AQ92828 525 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 GNPNAT1Q96EK6 184 aaPredicted RBP5.53□□□□□ -1.52
SPG11-224ENST00000561268 COQ2Q96H96 371 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 WNT10AQ9GZT5 417 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 SLC25A31Q9H0C2 315 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 NCOR1P1Q9H4R4 102 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 LINC00574Q9H8X3 128 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 ZNF286AQ9HBT8 521 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 SERTAD4Q9NUC0 356 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 OR5AC2Q9NZP5 309 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 RNF150Q9ULK6 438 aa5.53□□□□□ -1.52
SPG11-224ENST00000561268 UBE2J1Q9Y385 318 aaPredicted RBP5.53□□□□□ -1.52
SPG11-224ENST00000561268 TRAV1-1A0A0B4J248 108 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 TMEM238LA0A1B0GVL6 79 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 hADV38S2A0JD32 116 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 FAM74A7A6NL05 159 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 ADARB2-AS1A8MUL3 147 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 H3BSH0 61 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 SLC33A1O00400 549 aaPredicted RBP5.52□□□□□ -1.53
SPG11-224ENST00000561268 HSPA12AO43301 675 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 ADAP1O75689 374 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 MMP23AO75900 390 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 LY86O95711 162 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 OR2H2O95918 312 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 PRKACAP17612 351 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 FUT3P21217 361 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 COX7A1P24310 79 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 S100GP29377 79 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 FCGR2CP31995 323 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 TAGLN2P37802 199 aaKnown RBP5.52□□□□□ -1.53
SPG11-224ENST00000561268 CD81P60033 236 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 GNMTQ14749 295 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 HERPUD1Q15011 391 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 FAM74A3Q4VXF1 159 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 ABCA11PQ4W5N1 156 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 PDLIM3Q53GG5 364 aaPredicted RBP5.52□□□□□ -1.53
SPG11-224ENST00000561268 DNLZQ5SXM8 178 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 KPRPQ5T749 579 aaPredicted RBP5.52□□□□□ -1.53
SPG11-224ENST00000561268 GGNBP1Q5YKI7 109 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 C16orf82Q7Z2V1 217 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 OSR2Q8N2R0 312 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.52□□□□□ -1.53
SPG11-224ENST00000561268 OR4C13Q8NGP0 309 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 OR13D1Q8NGV5 346 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 RTN4IP1Q8WWV3 396 aaPredicted RBP5.52□□□□□ -1.53
SPG11-224ENST00000561268 KIRREL1Q96J84 757 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 CMSS1Q9BQ75 279 aaKnown RBP5.52□□□□□ -1.53
SPG11-224ENST00000561268 SULT4A1Q9BR01 284 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 ZNF2Q9BSG1 426 aaPredicted RBP5.52□□□□□ -1.53
SPG11-224ENST00000561268 CLEC7AQ9BXN2 247 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 PARD6GQ9BYG4 376 aaPredicted RBP5.52□□□□□ -1.53
SPG11-224ENST00000561268 NPFFR1Q9GZQ6 430 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 TMEM133Q9H2Q1 129 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 BANF2Q9H503 90 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 C11orf1Q9H5F2 150 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 SLC2A9Q9NRM0 540 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 TMEM242Q9NWH2 141 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 CACFD1Q9UGQ2 172 aa5.52□□□□□ -1.53
SPG11-224ENST00000561268 ODAMA1E959 279 aa5.51□□□□□ -1.53
SPG11-224ENST00000561268 MEX3AA1L020 520 aaKnown RBP5.51□□□□□ -1.53
SPG11-224ENST00000561268 MSGN1A6NI15 193 aa5.51□□□□□ -1.53
SPG11-224ENST00000561268 ZNF98A6NK75 572 aa5.51□□□□□ -1.53
SPG11-224ENST00000561268 COLCA2A8K830 154 aa5.51□□□□□ -1.53
SPG11-224ENST00000561268 B4DEV8 164 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms