RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 GREB1Q4ZG55 1949 aa0.72□□□□□ -2.29
PSMA4-221ENST00000560842 MYOFQ9NZM1 2061 aa0.71□□□□□ -2.3
PSMA4-221ENST00000560842 TRPC5OSA6NMA1 111 aa0.71□□□□□ -2.3
PSMA4-221ENST00000560842 IBA57-AS1B1ANH7 110 aa0.71□□□□□ -2.3
PSMA4-221ENST00000560842 COX7A2LO14548 114 aa0.71□□□□□ -2.3
PSMA4-221ENST00000560842 HCRTO43612 131 aa0.71□□□□□ -2.3
PSMA4-221ENST00000560842 CD40LGP29965 261 aa0.71□□□□□ -2.3
PSMA4-221ENST00000560842 SLCO1A2P46721 670 aa0.71□□□□□ -2.3
PSMA4-221ENST00000560842 SBSNQ6UWP8 590 aa0.71□□□□□ -2.3
PSMA4-221ENST00000560842 TMEM86AQ8N2M4 240 aa0.71□□□□□ -2.3
PSMA4-221ENST00000560842 SPANXB1Q9NS25 103 aaPredicted RBP0.71□□□□□ -2.3
PSMA4-221ENST00000560842 CUL9Q8IWT3 2517 aa0.71□□□□□ -2.3
PSMA4-221ENST00000560842 BRWD1Q9NSI6 2320 aa0.7□□□□□ -2.3
PSMA4-221ENST00000560842 TRAPPC2LH3BP13 241 aa0.7□□□□□ -2.3
PSMA4-221ENST00000560842 HPGDSO60760 199 aa0.7□□□□□ -2.3
PSMA4-221ENST00000560842 TFPTP0C1Z6 253 aa0.7□□□□□ -2.3
PSMA4-221ENST00000560842 PSMB6P28072 239 aa0.7□□□□□ -2.3
PSMA4-221ENST00000560842 DEFB115Q30KQ5 88 aa0.7□□□□□ -2.3
PSMA4-221ENST00000560842 OR7G1Q8NGA0 311 aa0.7□□□□□ -2.3
PSMA4-221ENST00000560842 SGMS2Q8NHU3 365 aa0.7□□□□□ -2.3
PSMA4-221ENST00000560842 JOSD2Q8TAC2 188 aa0.7□□□□□ -2.3
PSMA4-221ENST00000560842 SMIM19Q96E16 107 aa0.7□□□□□ -2.3
PSMA4-221ENST00000560842 ODF3Q96PU9 254 aa0.7□□□□□ -2.3
PSMA4-221ENST00000560842 DERL2Q9GZP9 239 aa0.7□□□□□ -2.3
PSMA4-221ENST00000560842 HRASLSQ9HDD0 168 aa0.7□□□□□ -2.3
PSMA4-221ENST00000560842 PRELID1Q9Y255 219 aa0.7□□□□□ -2.3
PSMA4-221ENST00000560842 LHFPL6Q9Y693 200 aa0.7□□□□□ -2.3
PSMA4-221ENST00000560842 ROS1P08922 2347 aa0.7□□□□□ -2.3
PSMA4-221ENST00000560842 KIF15Q9NS87 1388 aa0.7□□□□□ -2.3
PSMA4-221ENST00000560842 IGKV2D-26A0A0A0MRZ7 120 aa0.69□□□□□ -2.3
PSMA4-221ENST00000560842 GOLGA6L10A6NI86 522 aa0.69□□□□□ -2.3
PSMA4-221ENST00000560842 FAM25EA8MYX2 175 aa0.69□□□□□ -2.3
PSMA4-221ENST00000560842 ATP8B1O43520 1251 aa0.69□□□□□ -2.3
PSMA4-221ENST00000560842 ORC5O43913 435 aa0.69□□□□□ -2.3
PSMA4-221ENST00000560842 MSMBP08118 114 aa0.69□□□□□ -2.3
PSMA4-221ENST00000560842 EMX1Q04741 257 aaPredicted RBP0.69□□□□□ -2.3
PSMA4-221ENST00000560842 SURF2Q15527 256 aaPredicted RBP0.69□□□□□ -2.3
PSMA4-221ENST00000560842 FAM27BQ5VT28 67 aa0.69□□□□□ -2.3
PSMA4-221ENST00000560842 UBL4BQ8N7F7 174 aa0.69□□□□□ -2.3
PSMA4-221ENST00000560842 DHRS9Q9BPW9 319 aa0.69□□□□□ -2.3
PSMA4-221ENST00000560842 BBS2Q9BXC9 721 aa0.69□□□□□ -2.3
PSMA4-221ENST00000560842 CD300AQ9UGN4 299 aa0.69□□□□□ -2.3
PSMA4-221ENST00000560842 COQ4Q9Y3A0 265 aa0.69□□□□□ -2.3
PSMA4-221ENST00000560842 GMEB1Q9Y692 573 aa0.69□□□□□ -2.3
PSMA4-221ENST00000560842 TONSLQ96HA7 1378 aa0.69□□□□□ -2.3
PSMA4-221ENST00000560842 FREM1Q5H8C1 2179 aa0.69□□□□□ -2.3
PSMA4-221ENST00000560842 HEATR5BQ9P2D3 2071 aa0.68□□□□□ -2.3
PSMA4-221ENST00000560842 BIRC5O15392 142 aa0.68□□□□□ -2.3
PSMA4-221ENST00000560842 NSA2O95478 260 aaKnown RBP0.68□□□□□ -2.3
PSMA4-221ENST00000560842 HLA-DRAP01903 254 aa0.68□□□□□ -2.3
PSMA4-221ENST00000560842 PPBPP02775 128 aa0.68□□□□□ -2.3
PSMA4-221ENST00000560842 PET100P0DJ07 73 aa0.68□□□□□ -2.3
PSMA4-221ENST00000560842 TNFAIP6P98066 277 aaPredicted RBP0.68□□□□□ -2.3
PSMA4-221ENST00000560842 C9orf64Q5T6V5 341 aa0.68□□□□□ -2.3
PSMA4-221ENST00000560842 NAA40Q86UY6 237 aa0.68□□□□□ -2.3
PSMA4-221ENST00000560842 UMODL1-AS1Q8N2C9 162 aa0.68□□□□□ -2.3
PSMA4-221ENST00000560842 EEF1AKMT1Q8WVE0 214 aa0.68□□□□□ -2.3
PSMA4-221ENST00000560842 BAZ2BQ9UIF8 2168 aaKnown RBP0.67□□□□□ -2.3
PSMA4-221ENST00000560842 ERICH2A1L162 156 aa0.67□□□□□ -2.3
PSMA4-221ENST00000560842 TRGC1P0CF51 173 aa0.67□□□□□ -2.3
PSMA4-221ENST00000560842 PRB4P10163 310 aaPredicted RBP0.67□□□□□ -2.3
PSMA4-221ENST00000560842 RNASE3P12724 160 aaKnown RBP0.67□□□□□ -2.3
PSMA4-221ENST00000560842 TNFAIP8L3Q5GJ75 292 aa0.67□□□□□ -2.3
PSMA4-221ENST00000560842 C10orf55Q5SWW7 151 aa0.67□□□□□ -2.3
PSMA4-221ENST00000560842 SSX8Q7RTT4 187 aa0.67□□□□□ -2.3
PSMA4-221ENST00000560842 SLC22A24Q8N4F4 322 aa0.67□□□□□ -2.3
PSMA4-221ENST00000560842 OR2T27Q8NH04 317 aa0.67□□□□□ -2.3
PSMA4-221ENST00000560842 ZNF514Q96K75 400 aaPredicted RBP0.67□□□□□ -2.3
PSMA4-221ENST00000560842 CHMP4BQ9H444 224 aaKnown RBP0.67□□□□□ -2.3
PSMA4-221ENST00000560842 NAT8Q9UHE5 227 aa0.67□□□□□ -2.3
PSMA4-221ENST00000560842 ANAPC10Q9UM13 185 aa0.67□□□□□ -2.3
PSMA4-221ENST00000560842 C22orf24Q9Y442 160 aa0.67□□□□□ -2.3
PSMA4-221ENST00000560842 COL4A5P29400 1685 aa0.66□□□□□ -2.3
PSMA4-221ENST00000560842 SETD5Q9C0A6 1442 aa0.66□□□□□ -2.3
PSMA4-221ENST00000560842 TRBV10-2A0A0K0K1G8 114 aa0.66□□□□□ -2.3
PSMA4-221ENST00000560842 TMEM269A0A1B0GVZ9 245 aa0.66□□□□□ -2.3
PSMA4-221ENST00000560842 MSNP26038 577 aaKnown RBP0.66□□□□□ -2.3
PSMA4-221ENST00000560842 RPL30P62888 115 aaKnown RBP0.66□□□□□ -2.3
PSMA4-221ENST00000560842 C1orf194Q5T5A4 169 aa0.66□□□□□ -2.3
PSMA4-221ENST00000560842 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.66□□□□□ -2.3
PSMA4-221ENST00000560842 DHFR2Q86XF0 187 aa0.66□□□□□ -2.3
PSMA4-221ENST00000560842 OR8B3Q8NGG8 313 aa0.66□□□□□ -2.3
PSMA4-221ENST00000560842 ACOT12Q8WYK0 555 aa0.66□□□□□ -2.3
PSMA4-221ENST00000560842 GPR84Q9NQS5 396 aa0.66□□□□□ -2.3
PSMA4-221ENST00000560842 RSL24D1Q9UHA3 163 aaKnown RBP0.66□□□□□ -2.3
PSMA4-221ENST00000560842 TIMM22Q9Y584 194 aa0.66□□□□□ -2.3
PSMA4-221ENST00000560842 KIF24Q5T7B8 1368 aa0.66□□□□□ -2.3
PSMA4-221ENST00000560842 INTS1Q8N201 2190 aaKnown RBP0.65□□□□□ -2.31
PSMA4-221ENST00000560842 FABP12A6NFH5 140 aa0.65□□□□□ -2.31
PSMA4-221ENST00000560842 LST1O00453 97 aa0.65□□□□□ -2.31
PSMA4-221ENST00000560842 LEPROTO15243 131 aa0.65□□□□□ -2.31
PSMA4-221ENST00000560842 CCL1P22362 96 aa0.65□□□□□ -2.31
PSMA4-221ENST00000560842 POLR2GP62487 172 aaKnown RBP eCLIP0.65□□□□□ -2.31
PSMA4-221ENST00000560842 FAM78BQ5VT40 261 aa0.65□□□□□ -2.31
PSMA4-221ENST00000560842 C5orf46Q6UWT4 87 aa0.65□□□□□ -2.31
PSMA4-221ENST00000560842 Q8N402 240 aa0.65□□□□□ -2.31
PSMA4-221ENST00000560842 ZNF439Q8NDP4 499 aa0.65□□□□□ -2.31
PSMA4-221ENST00000560842 TESCQ96BS2 214 aa0.65□□□□□ -2.31
PSMA4-221ENST00000560842 OR8D2Q9GZM6 311 aa0.65□□□□□ -2.31
PSMA4-221ENST00000560842 SPACA1Q9HBV2 294 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms