RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 FLYWCH2Q96CP2 140 aaKnown RBP10.47□□□□□ -0.73
SNX1-211ENST00000560829 HARBI1Q96MB7 349 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 MMP26Q9NRE1 261 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 ONECUT1Q9UBC0 465 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 NUP50Q9UKX7 468 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 AMMECR1Q9Y4X0 333 aaPredicted RBP10.47□□□□□ -0.73
SNX1-211ENST00000560829 C15orf62A8K5M9 175 aa10.46□□□□□ -0.74
SNX1-211ENST00000560829 TEX46H3BTG2 121 aa10.46□□□□□ -0.74
SNX1-211ENST00000560829 H7C2Y5 167 aa10.46□□□□□ -0.74
SNX1-211ENST00000560829 SAA1P0DJI8 122 aaPredicted RBP10.46□□□□□ -0.74
SNX1-211ENST00000560829 RPP30P78346 268 aaKnown RBP10.46□□□□□ -0.74
SNX1-211ENST00000560829 LRRC75BQ2VPJ9 315 aa10.46□□□□□ -0.74
SNX1-211ENST00000560829 SPINK9Q5DT21 86 aa10.46□□□□□ -0.74
SNX1-211ENST00000560829 UQCC3Q6UW78 93 aa10.46□□□□□ -0.74
SNX1-211ENST00000560829 IL34Q6ZMJ4 242 aa10.46□□□□□ -0.74
SNX1-211ENST00000560829 LILRB2Q8N423 598 aa10.46□□□□□ -0.74
SNX1-211ENST00000560829 OR11H6Q8NGC7 330 aa10.46□□□□□ -0.74
SNX1-211ENST00000560829 OR10P1Q8NGE3 313 aa10.46□□□□□ -0.74
SNX1-211ENST00000560829 OR4A5Q8NH83 315 aa10.46□□□□□ -0.74
SNX1-211ENST00000560829 PINX1Q96BK5 328 aaKnown RBP10.46□□□□□ -0.74
SNX1-211ENST00000560829 CLCC1Q96S66 551 aa10.46□□□□□ -0.74
SNX1-211ENST00000560829 HIPK2Q9H2X6 1198 aa10.46□□□□□ -0.74
SNX1-211ENST00000560829 NARFLQ9H6Q4 476 aa10.46□□□□□ -0.74
SNX1-211ENST00000560829 LY6LH3BQJ8 138 aa10.45□□□□□ -0.74
SNX1-211ENST00000560829 KBTBD11O94819 623 aa10.45□□□□□ -0.74
SNX1-211ENST00000560829 IGHV4-39P01824 125 aa10.45□□□□□ -0.74
SNX1-211ENST00000560829 PRTN3P24158 256 aa10.45□□□□□ -0.74
SNX1-211ENST00000560829 F2RL1P55085 397 aa10.45□□□□□ -0.74
SNX1-211ENST00000560829 VWC2Q2TAL6 325 aa10.45□□□□□ -0.74
SNX1-211ENST00000560829 Q6ZRG5 221 aa10.45□□□□□ -0.74
SNX1-211ENST00000560829 OR2G3Q8NGZ4 309 aa10.45□□□□□ -0.74
SNX1-211ENST00000560829 VSTM2AQ8TAG5 236 aa10.45□□□□□ -0.74
SNX1-211ENST00000560829 UNKLQ9H9P5 680 aaKnown RBP10.45□□□□□ -0.74
SNX1-211ENST00000560829 FKBP11Q9NYL4 201 aa10.45□□□□□ -0.74
SNX1-211ENST00000560829 DCHS2Q6V1P9 2916 aa10.45□□□□□ -0.74
SNX1-211ENST00000560829 DLX1P56177 255 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 ARF6P62330 175 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 RUNX1Q01196 453 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 PAX2Q02962 417 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 SRSF1Q07955 248 aaKnown RBP eCLIP10.44□□□□□ -0.74
SNX1-211ENST00000560829 PJVKQ0ZLH3 352 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 OR8G2PQ6IF36 304 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 TMEM182Q6ZP80 229 aaPredicted RBP10.44□□□□□ -0.74
SNX1-211ENST00000560829 OR5B3Q8NH48 314 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 TMEM167AQ8TBQ9 72 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 PSMG3Q9BT73 122 aaPredicted RBP10.44□□□□□ -0.74
SNX1-211ENST00000560829 TMEM147Q9BVK8 224 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 BPESC1Q9GZL8 116 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 WDR61Q9GZS3 305 aaKnown RBP10.44□□□□□ -0.74
SNX1-211ENST00000560829 MS4A7Q9GZW8 240 aaPredicted RBP10.44□□□□□ -0.74
SNX1-211ENST00000560829 HEYLQ9NQ87 328 aaPredicted RBP10.44□□□□□ -0.74
SNX1-211ENST00000560829 OR51B2Q9Y5P1 312 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 MALRD1Q5VYJ5 2156 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 KRBOX1C9JBD0 128 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 ENSAO43768 121 aaKnown RBP10.44□□□□□ -0.74
SNX1-211ENST00000560829 IGLV2-23P01705 113 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 ZP3P21754 424 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 USF1P22415 310 aaPredicted RBP10.44□□□□□ -0.74
SNX1-211ENST00000560829 COX7A1P24310 79 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 ZFP36P26651 326 aaKnown RBP10.44□□□□□ -0.74
SNX1-211ENST00000560829 LGALS7P47929 136 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 PDLIM4P50479 330 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 LMO4P61968 165 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 PRCDQ00LT1 54 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 SLC25A24Q6NUK1 477 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 PNKDQ8N490 385 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 SCGB1C1Q8TD33 95 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 RBMXL1Q96E39 390 aaKnown RBP10.44□□□□□ -0.74
SNX1-211ENST00000560829 CCL19Q99731 98 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 KPTNQ9Y664 436 aa10.44□□□□□ -0.74
SNX1-211ENST00000560829 IGHV1-3A0A0C4DH29 117 aa10.43□□□□□ -0.74
SNX1-211ENST00000560829 ODF3BA8MYP8 253 aa10.43□□□□□ -0.74
SNX1-211ENST00000560829 MDKP21741 143 aaPredicted RBP10.43□□□□□ -0.74
SNX1-211ENST00000560829 CAMLGP49069 296 aa10.43□□□□□ -0.74
SNX1-211ENST00000560829 HOXA1P49639 335 aaPredicted RBP10.43□□□□□ -0.74
SNX1-211ENST00000560829 HCP5Q6MZN7 132 aa10.43□□□□□ -0.74
SNX1-211ENST00000560829 CENPVQ7Z7K6 275 aaPredicted RBP10.43□□□□□ -0.74
SNX1-211ENST00000560829 THNSL2Q86YJ6 484 aa10.43□□□□□ -0.74
SNX1-211ENST00000560829 CLDND2Q8NHS1 167 aa10.43□□□□□ -0.74
SNX1-211ENST00000560829 GGACTQ9BVM4 153 aa10.43□□□□□ -0.74
SNX1-211ENST00000560829 HRH4Q9H3N8 390 aa10.43□□□□□ -0.74
SNX1-211ENST00000560829 UQCC1Q9NVA1 299 aa10.43□□□□□ -0.74
SNX1-211ENST00000560829 TIMM9Q9Y5J7 89 aa10.43□□□□□ -0.74
SNX1-211ENST00000560829 RFNGQ9Y644 331 aa10.43□□□□□ -0.74
SNX1-211ENST00000560829 TEX50A0A1B0GTY4 177 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 PRSS46E5RG02 174 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 INS-IGF2F8WCM5 200 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 IFNA10P01566 189 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 RPS16P62249 146 aaKnown RBP10.42□□□□□ -0.74
SNX1-211ENST00000560829 DPPA3Q6W0C5 159 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 COMMD1Q8N668 190 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 TMEM170AQ8WVE7 144 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 TAF15Q92804 592 aaKnown RBP eCLIP10.42□□□□□ -0.74
SNX1-211ENST00000560829 SIRT7Q9NRC8 400 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 INSIG2Q9Y5U4 225 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 ZFYVE26Q68DK2 2539 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 PRH1P02810 166 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 FHITP49789 147 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 ATP5IP56385 69 aaPredicted RBP10.42□□□□□ -0.74
SNX1-211ENST00000560829 RPL8P62917 257 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms