RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	MYL9	P24844	172 aa		10.27	□□□□□ -0.77
RNF31-223	ENST00000560754	FGF9	P31371	208 aa	Predicted RBP	10.27	□□□□□ -0.77
RNF31-223	ENST00000560754	KCTD9	Q7L273	389 aa		10.27	□□□□□ -0.77
RNF31-223	ENST00000560754	VKORC1L1	Q8N0U8	176 aa		10.27	□□□□□ -0.77
RNF31-223	ENST00000560754	MFSD4A	Q8N468	514 aa		10.27	□□□□□ -0.77
RNF31-223	ENST00000560754	DEFB125	Q8N687	156 aa		10.27	□□□□□ -0.77
RNF31-223	ENST00000560754	VSTM2A	Q8TAG5	236 aa		10.27	□□□□□ -0.77
RNF31-223	ENST00000560754	OR2A7	Q96R45	310 aa		10.27	□□□□□ -0.77
RNF31-223	ENST00000560754	HSD17B10	Q99714	261 aa	Known RBP	10.27	□□□□□ -0.77
RNF31-223	ENST00000560754	FBXL7	Q9UJT9	491 aa		10.27	□□□□□ -0.77
RNF31-223	ENST00000560754	EPPK1	P58107	5090 aa	Known RBP	10.27	□□□□□ -0.77
RNF31-223	ENST00000560754	PPP5D1	E7EU14	171 aa		10.26	□□□□□ -0.77
RNF31-223	ENST00000560754	KBTBD11	O94819	623 aa		10.26	□□□□□ -0.77
RNF31-223	ENST00000560754	NDUFB8	O95169	186 aa		10.26	□□□□□ -0.77
RNF31-223	ENST00000560754	C22orf42	Q6IC83	251 aa		10.26	□□□□□ -0.77
RNF31-223	ENST00000560754	RETN	Q9HD89	108 aa		10.26	□□□□□ -0.77
RNF31-223	ENST00000560754	ANXA10	Q9UJ72	324 aa		10.26	□□□□□ -0.77
RNF31-223	ENST00000560754	MRPS7	Q9Y2R9	242 aa	Known RBP	10.26	□□□□□ -0.77
RNF31-223	ENST00000560754	NOTO	A8MTQ0	251 aa		10.25	□□□□□ -0.77
RNF31-223	ENST00000560754	SSX5	O60225	188 aa		10.25	□□□□□ -0.77
RNF31-223	ENST00000560754	MRPS14	O60783	128 aa	Known RBP	10.25	□□□□□ -0.77
RNF31-223	ENST00000560754	HLA-A	P01891	365 aa	Known RBP	10.25	□□□□□ -0.77
RNF31-223	ENST00000560754	CD36	P16671	472 aa		10.25	□□□□□ -0.77
RNF31-223	ENST00000560754	EDN2	P20800	178 aa		10.25	□□□□□ -0.77
RNF31-223	ENST00000560754	TPRA1	Q86W33	373 aa		10.25	□□□□□ -0.77
RNF31-223	ENST00000560754	CCDC140	Q96MF4	163 aa		10.25	□□□□□ -0.77
RNF31-223	ENST00000560754	FYTTD1	Q96QD9	318 aa	Known RBP	10.25	□□□□□ -0.77
RNF31-223	ENST00000560754	SCGN	O76038	276 aa		10.24	□□□□□ -0.77
RNF31-223	ENST00000560754	HRAS	P01112	189 aa		10.24	□□□□□ -0.77
RNF31-223	ENST00000560754	CTRB1	P17538	263 aa		10.24	□□□□□ -0.77
RNF31-223	ENST00000560754	PSMB6	P28072	239 aa		10.24	□□□□□ -0.77
RNF31-223	ENST00000560754	RPL27A	P46776	148 aa	Known RBP	10.24	□□□□□ -0.77
RNF31-223	ENST00000560754	MSMO1	Q15800	293 aa		10.24	□□□□□ -0.77
RNF31-223	ENST00000560754	FAM106A	Q4KMX7	169 aa		10.24	□□□□□ -0.77
RNF31-223	ENST00000560754	UBE2U	Q5VVX9	321 aa		10.24	□□□□□ -0.77
RNF31-223	ENST00000560754	CTRB2	Q6GPI1	263 aa		10.24	□□□□□ -0.77
RNF31-223	ENST00000560754	ZNF66	Q6ZN08	573 aa		10.24	□□□□□ -0.77
RNF31-223	ENST00000560754	OR4S2	Q8NH73	311 aa		10.24	□□□□□ -0.77
RNF31-223	ENST00000560754	WDR89	Q96FK6	387 aa	Predicted RBP	10.24	□□□□□ -0.77
RNF31-223	ENST00000560754	TXNL4B	Q9NX01	149 aa	Known RBP	10.24	□□□□□ -0.77
RNF31-223	ENST00000560754	BLOC1S6	Q9UL45	172 aa		10.24	□□□□□ -0.77
RNF31-223	ENST00000560754	SPATA2	Q9UM82	520 aa		10.24	□□□□□ -0.77
RNF31-223	ENST00000560754	TMEM213	A2RRL7	107 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	TMEM235	A6NFC5	223 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	CGB1	A6NKQ9	187 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754		A8MWP6	167 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	DHFR	P00374	187 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	C8orf88	P0DMB2	117 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	AREG	P15514	252 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	HIST1H1B	P16401	226 aa	Known RBP	10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	ARL3	P36405	182 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	HSPA13	P48723	471 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	GUCA2B	Q16661	112 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	OR2B11	Q5JQS5	317 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	CLEC19A	Q6UXS0	136 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	C19orf35	Q6ZS72	473 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	DYNLRB2	Q8TF09	96 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	NUDCD2	Q8WVJ2	157 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	CNBD2	Q96M20	576 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	FAM110A	Q9BQ89	295 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	AIFM2	Q9BRQ8	373 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	WFDC10A	Q9H1F0	79 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	SRD5A3	Q9H8P0	318 aa		10.23	□□□□□ -0.77
RNF31-223	ENST00000560754	IGLV11-55	A0A075B6I3	123 aa		10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	TRBV7-1	A0A0A6YYK4	115 aa		10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	DPPA5	A6NC42	116 aa		10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	RBFOX2	O43251	390 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	JTB	O76095	146 aa		10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	CLEC3B	P05452	202 aa		10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	RPL8	P62917	257 aa	Known RBP	10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	ZNF57	Q68EA5	555 aa	Predicted RBP	10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	ZNF773	Q6PK81	442 aa		10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	TMEM61	Q8N0U2	210 aa		10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	ZBTB34	Q8NCN2	500 aa		10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	OR4A5	Q8NH83	315 aa		10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	TCTEX1D2	Q8WW35	142 aa		10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	GPHA2	Q96T91	129 aa		10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	VCX3B	Q9H321	246 aa		10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	BET1L	Q9NYM9	111 aa		10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	TAS2R8	Q9NYW2	309 aa		10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	MLX	Q9UH92	298 aa		10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	RAB26	Q9ULW5	256 aa		10.22	□□□□□ -0.77
RNF31-223	ENST00000560754	TRAV25	A0A0B4J276	109 aa		10.21	□□□□□ -0.77
RNF31-223	ENST00000560754	SMIM30	A4D0T7	59 aa		10.21	□□□□□ -0.77
RNF31-223	ENST00000560754	IGHV3-23	P01764	117 aa		10.21	□□□□□ -0.77
RNF31-223	ENST00000560754	GNG2	P59768	71 aa		10.21	□□□□□ -0.77
RNF31-223	ENST00000560754	GABARAPL2	P60520	117 aa		10.21	□□□□□ -0.77
RNF31-223	ENST00000560754	POU2AF1	Q16633	256 aa		10.21	□□□□□ -0.77
RNF31-223	ENST00000560754	OR4A47	Q6IF82	309 aa		10.21	□□□□□ -0.77
RNF31-223	ENST00000560754	IZUMO2	Q6UXV1	221 aa		10.21	□□□□□ -0.77
RNF31-223	ENST00000560754	SLC16A13	Q7RTY0	426 aa		10.21	□□□□□ -0.77
RNF31-223	ENST00000560754	SPART	Q8N0X7	666 aa		10.21	□□□□□ -0.77
RNF31-223	ENST00000560754	UXS1	Q8NBZ7	420 aa		10.21	□□□□□ -0.77
RNF31-223	ENST00000560754	CACNG8	Q8WXS5	425 aa		10.21	□□□□□ -0.77
RNF31-223	ENST00000560754	EEF1AKMT3	Q96AZ1	226 aa		10.21	□□□□□ -0.77
RNF31-223	ENST00000560754	CXorf58	Q96LI9	332 aa		10.21	□□□□□ -0.77
RNF31-223	ENST00000560754	OVOL2	Q9BRP0	275 aa		10.21	□□□□□ -0.77
RNF31-223	ENST00000560754	CCL28	Q9NRJ3	127 aa		10.21	□□□□□ -0.77
RNF31-223	ENST00000560754	DAPK2	Q9UIK4	370 aa		10.21	□□□□□ -0.77
RNF31-223	ENST00000560754	ZNF320	A2RRD8	509 aa		10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms