RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 TMEM167AQ8TBQ9 72 aa8.96□□□□□ -0.98
RABGGTA-216ENST00000560243 MOB3AQ96BX8 217 aa8.96□□□□□ -0.98
RABGGTA-216ENST00000560243 TMEM68Q96MH6 324 aa8.96□□□□□ -0.98
RABGGTA-216ENST00000560243 PRR25Q96S07 402 aa8.96□□□□□ -0.98
RABGGTA-216ENST00000560243 FXYD6Q9H0Q3 95 aa8.96□□□□□ -0.98
RABGGTA-216ENST00000560243 TRAV3A0A0B4J244 114 aa8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 FAM25AB3EWG3 89 aa8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 FAM25CB3EWG5 89 aa8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 FAM25GB3EWG6 89 aa8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 TEX22C9J3V5 150 aa8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 PGLYRP1O75594 196 aaPredicted RBP8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 ACTL6BO94805 426 aa8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 BRI3O95415 125 aa8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 RPA2P15927 270 aa8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 KIR2DS2P43631 304 aa8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 AADACL3Q5VUY0 350 aa8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 OR4A47Q6IF82 309 aa8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 MZT2AQ6P582 158 aa8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 CLVS1Q8IUQ0 354 aaPredicted RBP8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 SPIN2AQ99865 258 aa8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 SPIN2BQ9BPZ2 258 aa8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 MIXL1Q9H2W2 232 aa8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 SCPEP1Q9HB40 452 aa8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 ADAM30Q9UKF2 790 aa8.95□□□□□ -0.98
RABGGTA-216ENST00000560243 CGB1A6NKQ9 187 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 M0QYG6 137 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 RBFOX2O43251 390 aaKnown RBP eCLIP8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 CREBL2O60519 120 aaPredicted RBP8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 S1PR2O95136 353 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 HRASP01112 189 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 RLN1P04808 185 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 AREGP15514 252 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 RCVRNP35243 200 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 RPL27AP46776 148 aaKnown RBP8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 RHOGP84095 191 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 CATR1Q13166 79 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 ZNF343Q6P1L6 599 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 TTC9CQ8N5M4 171 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 OR6F1Q8NGZ6 308 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 OR52I2Q8NH67 350 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 AP3S1Q92572 193 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 FYTTD1Q96QD9 318 aaKnown RBP8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 ABHD1Q96SE0 405 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 AKIP1Q9NQ31 210 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 EXTL2Q9UBQ6 330 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 KLK11Q9UBX7 282 aa8.94□□□□□ -0.98
RABGGTA-216ENST00000560243 TRBV9A0A0B4J1U6 114 aa8.93□□□□□ -0.98
RABGGTA-216ENST00000560243 A0A0G2JLM5 398 aa8.93□□□□□ -0.98
RABGGTA-216ENST00000560243 CTDSP2O14595 271 aa8.93□□□□□ -0.98
RABGGTA-216ENST00000560243 SAP30O75446 220 aa8.93□□□□□ -0.98
RABGGTA-216ENST00000560243 ZNF735P0CB33 412 aa8.93□□□□□ -0.98
RABGGTA-216ENST00000560243 HLA-GP17693 338 aa8.93□□□□□ -0.98
RABGGTA-216ENST00000560243 RPL8P62917 257 aaKnown RBP8.93□□□□□ -0.98
RABGGTA-216ENST00000560243 ZNF585BQ52M93 769 aa8.93□□□□□ -0.98
RABGGTA-216ENST00000560243 PHLDA2Q53GA4 152 aa8.93□□□□□ -0.98
RABGGTA-216ENST00000560243 ACSM6Q6P461 480 aa8.93□□□□□ -0.98
RABGGTA-216ENST00000560243 HAPLN4Q86UW8 402 aa8.93□□□□□ -0.98
RABGGTA-216ENST00000560243 LAX1Q8IWV1 398 aa8.93□□□□□ -0.98
RABGGTA-216ENST00000560243 VSTM2AQ8TAG5 236 aa8.93□□□□□ -0.98
RABGGTA-216ENST00000560243 RANGRFQ9HD47 186 aaPredicted RBP8.93□□□□□ -0.98
RABGGTA-216ENST00000560243 HRASLSQ9HDD0 168 aa8.93□□□□□ -0.98
RABGGTA-216ENST00000560243 BET1LQ9NYM9 111 aa8.93□□□□□ -0.98
RABGGTA-216ENST00000560243 UPK2O00526 184 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 OR2J3O76001 311 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 HPRT1P00492 218 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 REG1AP05451 166 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 NQO2P16083 231 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 F2RP25116 425 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 MAS1LP35410 378 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 INSL3P51460 131 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 TAS2R31P59538 309 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 OR2B8PP59922 312 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 TSPAN5P62079 268 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 EXOSC2Q13868 293 aaKnown RBP8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 KLF5Q13887 457 aaPredicted RBP8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 POU2AF1Q16633 256 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 ZNF429Q86V71 674 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 FCAMRQ8WWV6 532 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 DGCR14Q96DF8 476 aaKnown RBP8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 USMG5Q96IX5 58 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 PLEKHA2Q9HB19 425 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 SLC2A9Q9NRM0 540 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 TMEM140Q9NV12 185 aa8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 PEF1Q9UBV8 284 aaKnown RBP8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 ZMAT5Q9UDW3 170 aaKnown RBP8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 ZNF256Q9Y2P7 627 aaPredicted RBP8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 LSM4Q9Y4Z0 139 aaKnown RBP8.92□□□□□ -0.98
RABGGTA-216ENST00000560243 FAM223BA6NKX1 122 aa8.91□□□□□ -0.98
RABGGTA-216ENST00000560243 NPIPB5A8MRT5 1133 aa8.91□□□□□ -0.98
RABGGTA-216ENST00000560243 GPR31O00270 319 aa8.91□□□□□ -0.98
RABGGTA-216ENST00000560243 RGS5O15539 181 aa8.91□□□□□ -0.98
RABGGTA-216ENST00000560243 LY86O95711 162 aa8.91□□□□□ -0.98
RABGGTA-216ENST00000560243 CD3DP04234 171 aa8.91□□□□□ -0.98
RABGGTA-216ENST00000560243 SPNP16150 400 aa8.91□□□□□ -0.98
RABGGTA-216ENST00000560243 LPAR6P43657 344 aa8.91□□□□□ -0.98
RABGGTA-216ENST00000560243 SYNJ2BPP57105 145 aa8.91□□□□□ -0.98
RABGGTA-216ENST00000560243 ATP5G2Q06055 141 aa8.91□□□□□ -0.98
RABGGTA-216ENST00000560243 VAX1Q5SQQ9 334 aa8.91□□□□□ -0.98
RABGGTA-216ENST00000560243 C11orf87Q6NUJ2 197 aa8.91□□□□□ -0.98
RABGGTA-216ENST00000560243 IL34Q6ZMJ4 242 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms