RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 DAPK2Q9UIK4 370 aa9.48□□□□□ -0.89
RABGGTA-213ENST00000560127 RAB22AQ9UL26 194 aa9.48□□□□□ -0.89
RABGGTA-213ENST00000560127 UBE2CO00762 179 aa9.47□□□□□ -0.89
RABGGTA-213ENST00000560127 TUSC2O75896 110 aa9.47□□□□□ -0.89
RABGGTA-213ENST00000560127 APOA2P02652 100 aa9.47□□□□□ -0.89
RABGGTA-213ENST00000560127 ALDH3B2P48448 385 aa9.47□□□□□ -0.89
RABGGTA-213ENST00000560127 NANOS2P60321 138 aaKnown RBP9.47□□□□□ -0.89
RABGGTA-213ENST00000560127 OR56B1Q8NGI3 324 aa9.47□□□□□ -0.89
RABGGTA-213ENST00000560127 OR10R2Q8NGX6 335 aa9.47□□□□□ -0.89
RABGGTA-213ENST00000560127 PTX4Q96A99 478 aa9.47□□□□□ -0.89
RABGGTA-213ENST00000560127 FUNDC2Q9BWH2 189 aa9.47□□□□□ -0.89
RABGGTA-213ENST00000560127 Q9N2K0 584 aa9.47□□□□□ -0.89
RABGGTA-213ENST00000560127 SLC35D1Q9NTN3 355 aa9.47□□□□□ -0.89
RABGGTA-213ENST00000560127 PLEKHJ1Q9NW61 149 aa9.47□□□□□ -0.89
RABGGTA-213ENST00000560127 LRP1BQ9NZR2 4599 aa9.47□□□□□ -0.89
RABGGTA-213ENST00000560127 IGKV1D-8A0A087WSZ0 117 aa9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 SRRM4A7MD48 611 aaKnown RBP9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 GGCTO75223 188 aaKnown RBP9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 HIST1H1DP16402 221 aaKnown RBP9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 GNB3P16520 340 aa9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 CTRB1P17538 263 aa9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 RPS19P39019 145 aaKnown RBP9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 CEACAM6P40199 344 aa9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 HLA-DRB3P79483 266 aa9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 C15orf32Q32M92 178 aa9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 CTRB2Q6GPI1 263 aa9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 GPHB5Q86YW7 130 aa9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 UXS1Q8NBZ7 420 aa9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 EDARADDQ8WWZ3 215 aa9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 RAB3CQ96E17 227 aa9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 HARBI1Q96MB7 349 aa9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 C12orf4Q9NQ89 552 aa9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 FBXL17Q9UF56 701 aa9.46□□□□□ -0.9
RABGGTA-213ENST00000560127 KIR2DL5BA0A0G2JN68 375 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 KIR2DL5BA0A0G2JPC4 375 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 M0R1X1 148 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 XRCC3O43542 346 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 SSX5O60225 188 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 FCGR3AP08637 254 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 SCTP09683 121 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 CTF1Q16619 201 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 BTNL8Q6UX41 500 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 MOB1BQ7L9L4 216 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 KIR2DL5AQ8N109 375 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 STPG3Q8N7X2 389 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 NECAP1Q8NC96 275 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 KIR2DL5BQ8NHK3 375 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 C2CD4CQ8TF44 421 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 SRSF12Q8WXF0 261 aaKnown RBP9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 MAFIPQ8WZ33 124 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 RHBDL2Q9NX52 303 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 UBQLN2Q9UHD9 624 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 ZNF221Q9UK13 617 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 APLNQ9ULZ1 77 aa9.45□□□□□ -0.9
RABGGTA-213ENST00000560127 A0A075B6Q4 140 aa9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 A8MWP6 167 aa9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 MPPED1O15442 326 aa9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 OR2J3O76001 311 aa9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 GABARAPO95166 117 aa9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 IFNA4P05014 189 aa9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 ZBTB25P24278 435 aa9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 TCTAP57738 103 aa9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 VBP1P61758 197 aa9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 RBMS2Q15434 407 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 TNXAQ16473 311 aa9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 PRSS8Q16651 343 aa9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 IDNKQ5T6J7 187 aa9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 GVQW1Q8N7I0 195 aa9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 OR1L6Q8NGR2 347 aa9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 C11orf45Q8TAV5 145 aa9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 SETD6Q8TBK2 473 aa9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 CMSS1Q9BQ75 279 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 MRPS26Q9BYN8 205 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 CHMP1AQ9HD42 196 aaPredicted RBP9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 VCX3AQ9NNX9 186 aa9.44□□□□□ -0.9
RABGGTA-213ENST00000560127 TRAV25A0A0B4J276 109 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 ZNF320A2RRD8 509 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 SHOXO15266 292 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 IGHV3-23P01764 117 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 CD3GP09693 182 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 RPL35AP18077 110 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 FCGR2BP31994 310 aaPredicted RBP9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 TIMM50Q3ZCQ8 353 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 TMEM177Q53S58 311 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 FAM209BQ5JX69 171 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 TTC9CQ8N5M4 171 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 OR2C3Q8N628 320 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 NUDCD2Q8WVJ2 157 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 SLC25A46Q96AG3 418 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 C5orf30Q96GV9 206 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 CCDC140Q96MF4 163 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 CABLES2Q9BTV7 478 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 MFFQ9GZY8 342 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 ATG5Q9H1Y0 275 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 FBXL7Q9UJT9 491 aa9.43□□□□□ -0.9
RABGGTA-213ENST00000560127 TMEM235A6NFC5 223 aa9.42□□□□□ -0.9
RABGGTA-213ENST00000560127 PRSS29PA6NIE9 313 aa9.42□□□□□ -0.9
RABGGTA-213ENST00000560127 TRDCB7Z8K6 153 aa9.42□□□□□ -0.9
RABGGTA-213ENST00000560127 RTL8CO15255 209 aa9.42□□□□□ -0.9
RABGGTA-213ENST00000560127 C8orf88P0DMB2 117 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms