RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 CHTOPQ9Y3Y2 248 aaKnown RBP11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 FOCADQ5VW36 1801 aa11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 DANCRP0C864 163 aa11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 SPINK2P20155 84 aa11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 ERVK11-1P61568 191 aa11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 RPP21Q9H633 154 aaKnown RBP11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 VSIG8P0DPA2 414 aa11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 FGFRL1Q8N441 504 aa11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 ZNF729A6NN14 1252 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 HMGA1P17096 107 aaKnown RBP11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 C3AR1Q16581 482 aa11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 DEFB123Q8N688 67 aa11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 FER1L6-AS1Q8NA97 138 aa11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 LAMTOR2Q9Y2Q5 125 aa11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 CXorf51AA0A1B0GTR3 108 aa11.9□□□□□ -0.5
CSPG4P12-202ENST00000559989 ICAM4Q14773 271 aa11.9□□□□□ -0.5
CSPG4P12-202ENST00000559989 TRAV8-1A0A0A6YYK1 113 aa11.9□□□□□ -0.5
CSPG4P12-202ENST00000559989 MPV17P39210 176 aa11.9□□□□□ -0.5
CSPG4P12-202ENST00000559989 TRIP6Q15654 476 aaKnown RBP11.9□□□□□ -0.5
CSPG4P12-202ENST00000559989 TNFRSF12AQ9NP84 129 aa11.9□□□□□ -0.5
CSPG4P12-202ENST00000559989 PGLYRP1O75594 196 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P12-202ENST00000559989 ATG4DQ86TL0 474 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P12-202ENST00000559989 NABP2Q9BQ15 211 aa11.9□□□□□ -0.5
CSPG4P12-202ENST00000559989 IZUMO1RA6ND01 250 aa11.9□□□□□ -0.5
CSPG4P12-202ENST00000559989 CHODLQ9H9P2 273 aa11.9□□□□□ -0.5
CSPG4P12-202ENST00000559989 EPDR1Q9UM22 224 aa11.9□□□□□ -0.5
CSPG4P12-202ENST00000559989 LINC00158P58513 81 aa11.9□□□□□ -0.5
CSPG4P12-202ENST00000559989 SSBP3Q9BWW4 388 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P12-202ENST00000559989 GGTLC1Q9BX51 225 aa11.9□□□□□ -0.5
CSPG4P12-202ENST00000559989 ADARB2-AS1A8MUL3 147 aa11.9□□□□□ -0.51
CSPG4P12-202ENST00000559989 HMGCLL1Q8TB92 370 aa11.9□□□□□ -0.51
CSPG4P12-202ENST00000559989 GSN-AS1Q9NRJ2 163 aa11.9□□□□□ -0.51
CSPG4P12-202ENST00000559989 RPRMQ9NS64 109 aa11.9□□□□□ -0.51
CSPG4P12-202ENST00000559989 OR2H2O95918 312 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 ZNF415Q09FC8 603 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 OCIAD2Q56VL3 154 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 ICE1Q9Y2F5 2266 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 HTN3P15516 51 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 LY6EQ16553 131 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 TEX45Q8NA69 505 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 ZNF784Q8NCA9 323 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 LHX9Q9NQ69 397 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 LRP10Q7Z4F1 713 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 KIAA0100Q14667 2235 aaKnown RBP11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 TRAV5A0A0B4J249 113 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 CDC42EP2O14613 210 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 SEC11AP67812 179 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 VKORC1Q9BQB6 163 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 RALGAPA1Q6GYQ0 2036 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 LOC105371242A0A075B767 164 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 CRYGNQ8WXF5 182 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 SCTP09683 121 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 UCP2P55851 309 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 SFTA2Q6UW10 78 aa11.89□□□□□ -0.51
CSPG4P12-202ENST00000559989 MPTX1A8MV57 137 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 IGKCP01834 107 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 LDLRAD2Q5SZI1 272 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 PLSCR4Q9NRQ2 329 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 KLF12Q9Y4X4 402 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 CD300CQ08708 224 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 R4GN57 208 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 MARCH11A6NNE9 402 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 FOXA3P55318 350 aaPredicted RBP11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 ZNF660Q6AZW8 331 aaPredicted RBP11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 STHQ8IWL8 128 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 LRP6O75581 1613 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 TMEM238C9JI98 176 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 UNC119Q13432 240 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 RASL10BQ96S79 203 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 CCL19Q99731 98 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 A0A0G2JLM5 398 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 DTX1Q86Y01 620 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 VSIG10L2P0DP72 767 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 RSPO2Q6UXX9 243 aaPredicted RBP11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 RSPO3Q9BXY4 272 aaPredicted RBP11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 PEMTQ9UBM1 199 aa11.88□□□□□ -0.51
CSPG4P12-202ENST00000559989 TRGV3P03979 118 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 RTN4RL2Q86UN3 420 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 LOXL4Q96JB6 756 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 TMEM186Q96B77 213 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 MRPS18BQ9Y676 258 aaKnown RBP11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 HYAL3O43820 417 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 C1QTNF12Q5T7M4 302 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 OR9G4Q8NGQ1 327 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 NMBP08949 121 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 ISXQ2M1V0 245 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 TMEM91Q6ZNR0 172 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 CD28P10747 220 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 FAM90A10PA6NDY2 464 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 FAM90A18PA6NE21 464 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 FAM90A16PA6NEW6 464 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 FAM90A20PA6NIJ5 464 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 FAM90A8PA6NJQ4 464 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 FAM90A7PA6NKC0 464 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 FAM90A22PA8MWA6 464 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 FAM90A12PA8MX19 464 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 FAM90A5PA8MXJ8 464 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 FAM90A23PA8MXZ1 464 aa11.87□□□□□ -0.51
CSPG4P12-202ENST00000559989 C2CD4DB7Z1M9 353 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms