RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 RPP25LQ8N5L8 163 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-212ENST00000559974 LRBAP50851 2863 aa11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 LRRK2Q5S007 2527 aa11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 TRAV38-1A0A0B4J264 116 aa11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 hADV38S2A0JD32 116 aa11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 TMPRSS2O15393 492 aa11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 MBP02144 154 aa11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 MT-ND4LP03901 98 aa11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 RPP30P78346 268 aaKnown RBP11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 MRPS11P82912 194 aaKnown RBP11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 TFF3Q07654 80 aa11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 HNF4GQ14541 408 aa11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 ZNF429Q86V71 674 aa11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 ZCCHC24Q8N2G6 241 aaKnown RBP11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 ISOC2Q96AB3 205 aa11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 ADTRPQ96IZ2 230 aa11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 NPCDR1Q9BY65 106 aa11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 SAP30LQ9HAJ7 183 aa11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 HRNRQ86YZ3 2850 aaPredicted RBP11.89□□□□□ -0.51
RABGGTA-212ENST00000559974 VSTM5A8MXK1 200 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 TSPAN9O75954 239 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 NDUFB7P17568 137 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 MDKP21741 143 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 GNG10P50151 68 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 RAB13P51153 203 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 C4orf17Q53FE4 359 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 RAB39BQ96DA2 213 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 WFIKKN1Q96NZ8 548 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 NIPSNAP3BQ9BS92 247 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 NGBQ9NPG2 151 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 SLC39A9Q9NUM3 307 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 RPUSD1Q9UJJ7 312 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 LINC00312Q9Y6C7 94 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 TRAV3A0A0B4J244 114 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 A0A1W2PPE2 198 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 A0A1W2PPH5 198 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 MMP23AO75900 390 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 IFNA1P01562 189 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 VDAC2P45880 294 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 PMS2P11Q13670 270 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 RNF212Q495C1 297 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 C1orf87Q8N0U7 546 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 ZNF709Q8N972 641 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 ZNF383Q8NA42 475 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 LHX4Q969G2 390 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 SLC25A10Q9UBX3 287 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 PKDREJQ9NTG1 2253 aa11.88□□□□□ -0.51
RABGGTA-212ENST00000559974 CTXND1A0A1B0GTU2 59 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 C15orf61A6NNL5 157 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 C17orf112F2Z3M2 114 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 IFNA10P01566 189 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 RAB11AP62491 216 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 FFAR4Q5NUL3 377 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 SLC25A48Q6ZT89 311 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 TVP23CQ96ET8 276 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 P2RX4Q99571 388 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 SAV1Q9H4B6 383 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 HEYLQ9NQ87 328 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 VAX2Q9UIW0 290 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 ARFGEF3Q5TH69 2177 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 DOPEY1Q5JWR5 2465 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 PPIAL4EA0A075B759 164 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 PPIAL4DF5H284 164 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 TMEM178BH3BS89 294 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 PPIAL4FP0DN26 164 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 PLA2G2AP14555 144 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 MEF2CQ06413 473 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 OR4A47Q6IF82 309 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 SLC35E3Q7Z769 313 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 OR10G9Q8NGN4 311 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 OR10G7Q8NGN6 311 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 CA5BP1Q8WTZ4 195 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 ITLN2Q8WWU7 325 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 RHOVQ96L33 236 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 GAL3ST2Q9H3Q3 398 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 SLC25A22Q9H936 323 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 TCF19Q9Y242 345 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 WDR83OSQ9Y284 106 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 PPIAL4AQ9Y536 164 aa11.87□□□□□ -0.51
RABGGTA-212ENST00000559974 SHISA9B4DS77 424 aa11.86□□□□□ -0.51
RABGGTA-212ENST00000559974 CD1BP29016 333 aa11.86□□□□□ -0.51
RABGGTA-212ENST00000559974 TAGLN2P37802 199 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-212ENST00000559974 RAB5BP61020 215 aa11.86□□□□□ -0.51
RABGGTA-212ENST00000559974 DLK1P80370 383 aa11.86□□□□□ -0.51
RABGGTA-212ENST00000559974 FAM90A2PQ658T7 463 aa11.86□□□□□ -0.51
RABGGTA-212ENST00000559974 OR10A7Q8NGE5 316 aa11.86□□□□□ -0.51
RABGGTA-212ENST00000559974 ACTR3CQ9C0K3 210 aaPredicted RBP11.86□□□□□ -0.51
RABGGTA-212ENST00000559974 SPTAN1Q13813 2472 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-212ENST00000559974 A0A087WWC5 75 aa11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 EIF3GO75821 320 aaKnown RBP eCLIP11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 OR2C1O95371 312 aa11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 HRASP01112 189 aa11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 CHRNB4P30926 498 aa11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 HOXA1P49639 335 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 RPL31P62899 125 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 HABP2Q14520 560 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 POU2AF1Q16633 256 aa11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 NCMAPQ5T1S8 102 aa11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 RBMS3Q6XE24 437 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 ZFP82Q8N141 532 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms