RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 SPIN2AQ99865 258 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 SPIN2BQ9BPZ2 258 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 SLC25A33Q9BSK2 321 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 FBXL15Q9H469 300 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 RANBP3Q9H6Z4 567 aaPredicted RBP8.34□□□□□ -1.07
TPM1-221ENST00000559831 TPSG1Q9NRR2 321 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 CACNG5Q9UF02 275 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 TCF19Q9Y242 345 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 TNCP24821 2201 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 F8P00451 2351 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 A6NDX4 124 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 UPK2O00526 184 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 RRHO14718 337 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 HOXA3O43365 443 aaPredicted RBP8.33□□□□□ -1.08
TPM1-221ENST00000559831 SNAPC5O75971 98 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 KBTBD11O94819 623 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 OR2A4O95047 310 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 SPDEFO95238 335 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 SCGB1D2O95969 90 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 P0C879 139 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 IER3P46695 156 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 CD83Q01151 205 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 SMCO1Q147U7 214 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 Q6ZRM9 215 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 PUSL1Q8N0Z8 303 aaKnown RBP8.33□□□□□ -1.08
TPM1-221ENST00000559831 TEX45Q8NA69 505 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 ZBTB8BQ8NAP8 495 aaPredicted RBP8.33□□□□□ -1.08
TPM1-221ENST00000559831 OR5R1Q8NH85 324 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 C2orf50Q96LR7 162 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 OR2A7Q96R45 310 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 ZNF436Q9C0F3 470 aaPredicted RBP8.33□□□□□ -1.08
TPM1-221ENST00000559831 BET1LQ9NYM9 111 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 C1RLQ9NZP8 487 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 MOB4Q9Y3A3 225 aa8.33□□□□□ -1.08
TPM1-221ENST00000559831 A0A1B0GU03 582 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 CCNKO75909 580 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 OR2F2O95006 317 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 CRYGBP07316 175 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 TRAPPC2P0DI81 140 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 TRAPPC2BP0DI82 140 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 HLA-GP17693 338 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 H2BFSP57053 126 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 GNB1P62873 340 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 RELBQ01201 579 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 AKAP14Q86UN6 197 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 NPBQ8NG41 125 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 OR8H1Q8NGG4 311 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 OR4A5Q8NH83 315 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 TMEM167AQ8TBQ9 72 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 CHAC2Q8WUX2 184 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 SSMEM1Q8WWF3 244 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 WDR89Q96FK6 387 aaPredicted RBP8.32□□□□□ -1.08
TPM1-221ENST00000559831 RBM14Q96PK6 669 aaKnown RBP8.32□□□□□ -1.08
TPM1-221ENST00000559831 DUX5Q96PT3 197 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 RASL11BQ9BPW5 248 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 QTRT1Q9BXR0 403 aaKnown RBP8.32□□□□□ -1.08
TPM1-221ENST00000559831 ZNF430Q9H8G1 570 aaPredicted RBP8.32□□□□□ -1.08
TPM1-221ENST00000559831 PLSCR3Q9NRY6 295 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.32□□□□□ -1.08
TPM1-221ENST00000559831 PITPNC1Q9UKF7 332 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 SIGLEC9Q9Y336 463 aa8.32□□□□□ -1.08
TPM1-221ENST00000559831 SH2D7A6NKC9 451 aaPredicted RBP8.31□□□□□ -1.08
TPM1-221ENST00000559831 C15orf61A6NNL5 157 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 CHST1O43916 411 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 ACTL6BO94805 426 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 NDUFA3O95167 84 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 OPN1MWP04001 364 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 GIPP09681 153 aaPredicted RBP8.31□□□□□ -1.08
TPM1-221ENST00000559831 OPN1MW2P0DN77 364 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 OPN1MW3P0DN78 364 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 SLC25A6P12236 298 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 MYOD1P15172 320 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 S100A10P60903 97 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 RPL8P62917 257 aaKnown RBP8.31□□□□□ -1.08
TPM1-221ENST00000559831 PJVKQ0ZLH3 352 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 TNXAQ16473 311 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 PRSS8Q16651 343 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 C5orf64Q2M2E5 130 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 LRRC37A5PQ49AS3 106 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 SPINK9Q5DT21 86 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 FOXRED2Q8IWF2 684 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 MMD2Q8IY49 270 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 Q8N9W7 124 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 HINT2Q9BX68 163 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 NMES1Q9C002 83 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 PRDM13Q9H4Q3 707 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 RANGRFQ9HD47 186 aaPredicted RBP8.31□□□□□ -1.08
TPM1-221ENST00000559831 VPREB3Q9UKI3 123 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 PRNDQ9UKY0 176 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 LSM5Q9Y4Y9 91 aaKnown RBP8.31□□□□□ -1.08
TPM1-221ENST00000559831 OR51B2Q9Y5P1 312 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 HIVEP1P15822 2718 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 MAST4O15021 2626 aa8.31□□□□□ -1.08
TPM1-221ENST00000559831 CELSR1Q9NYQ6 3014 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 SVEP1Q4LDE5 3571 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 FCN1O00602 326 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 ST8SIA3O43173 380 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 PFDN1O60925 122 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 CNIH1O95406 144 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 CA2P00918 260 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms