RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 HIST1H4AP62805 103 aaKnown RBP0.45□□□□□ -2.34
CASC4-210ENST00000559550 EBPQ15125 230 aaKnown RBP0.45□□□□□ -2.34
CASC4-210ENST00000559550 DEFB115Q30KQ5 88 aa0.45□□□□□ -2.34
CASC4-210ENST00000559550 FAM27BQ5VT28 67 aa0.45□□□□□ -2.34
CASC4-210ENST00000559550 GID4Q8IVV7 300 aa0.45□□□□□ -2.34
CASC4-210ENST00000559550 DYNAPQ8N1N2 210 aa0.45□□□□□ -2.34
CASC4-210ENST00000559550 TMEM86AQ8N2M4 240 aa0.45□□□□□ -2.34
CASC4-210ENST00000559550 SGMS2Q8NHU3 365 aa0.45□□□□□ -2.34
CASC4-210ENST00000559550 ASB13Q8WXK3 278 aa0.45□□□□□ -2.34
CASC4-210ENST00000559550 GNPNAT1Q96EK6 184 aaPredicted RBP0.45□□□□□ -2.34
CASC4-210ENST00000559550 REG4Q9BYZ8 158 aa0.45□□□□□ -2.34
CASC4-210ENST00000559550 COQ4Q9Y3A0 265 aa0.45□□□□□ -2.34
CASC4-210ENST00000559550 NCOA6Q14686 2063 aaPredicted RBP0.45□□□□□ -2.34
CASC4-210ENST00000559550 SETD5Q9C0A6 1442 aa0.45□□□□□ -2.34
CASC4-210ENST00000559550 SMARCA4P51532 1647 aa0.45□□□□□ -2.34
CASC4-210ENST00000559550 PTPRSQ13332 1948 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 IGKV1-9A0A0C4DH69 117 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 TINCRA0A1B0GVN0 87 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 IQCF5A8MTL0 148 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 APOMO95445 188 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 MSNP26038 577 aaKnown RBP0.44□□□□□ -2.34
CASC4-210ENST00000559550 EVX1P49640 407 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 RPL30P62888 115 aaKnown RBP0.44□□□□□ -2.34
CASC4-210ENST00000559550 AKR1C1Q04828 323 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 ANGPT1Q15389 498 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 DNM1P34Q6PK57 102 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 UMODL1-AS1Q8N2C9 162 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 OR2T27Q8NH04 317 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 ACOT12Q8WYK0 555 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 TESCQ96BS2 214 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 ANKRD36BP1Q96IX9 119 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 BBS2Q9BXC9 721 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 DERL2Q9GZP9 239 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 EURLQ9NYK6 297 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 TIMM22Q9Y584 194 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 GMEB1Q9Y692 573 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 LHFPL6Q9Y693 200 aa0.44□□□□□ -2.34
CASC4-210ENST00000559550 ATP8B1O43520 1251 aa0.43□□□□□ -2.34
CASC4-210ENST00000559550 CXCR4P61073 352 aa0.43□□□□□ -2.34
CASC4-210ENST00000559550 C9orf64Q5T6V5 341 aa0.43□□□□□ -2.34
CASC4-210ENST00000559550 SBSNQ6UWP8 590 aa0.43□□□□□ -2.34
CASC4-210ENST00000559550 DCXRQ7Z4W1 244 aa0.43□□□□□ -2.34
CASC4-210ENST00000559550 FAM19A5Q7Z5A7 132 aaPredicted RBP0.43□□□□□ -2.34
CASC4-210ENST00000559550 CD302Q8IX05 232 aa0.43□□□□□ -2.34
CASC4-210ENST00000559550 FAM19A2Q8N3H0 131 aa0.43□□□□□ -2.34
CASC4-210ENST00000559550 ZNF439Q8NDP4 499 aa0.43□□□□□ -2.34
CASC4-210ENST00000559550 EEF1AKMT1Q8WVE0 214 aa0.43□□□□□ -2.34
CASC4-210ENST00000559550 OR8D2Q9GZM6 311 aa0.43□□□□□ -2.34
CASC4-210ENST00000559550 CXorf21Q9HAI6 301 aa0.43□□□□□ -2.34
CASC4-210ENST00000559550 HES4Q9HCC6 221 aa0.43□□□□□ -2.34
CASC4-210ENST00000559550 CD300AQ9UGN4 299 aa0.43□□□□□ -2.34
CASC4-210ENST00000559550 PRELID1Q9Y255 219 aa0.43□□□□□ -2.34
CASC4-210ENST00000559550 GLI3P10071 1580 aa0.43□□□□□ -2.34
CASC4-210ENST00000559550 TONSLQ96HA7 1378 aa0.43□□□□□ -2.34
CASC4-210ENST00000559550 TMEM213A2RRL7 107 aa0.42□□□□□ -2.34
CASC4-210ENST00000559550 TRPC5OSA6NMA1 111 aa0.42□□□□□ -2.34
CASC4-210ENST00000559550 LEPROTO15243 131 aa0.42□□□□□ -2.34
CASC4-210ENST00000559550 NEMFO60524 1076 aa0.42□□□□□ -2.34
CASC4-210ENST00000559550 NPPAP01160 153 aa0.42□□□□□ -2.34
CASC4-210ENST00000559550 UBBP0CG47 229 aa0.42□□□□□ -2.34
CASC4-210ENST00000559550 PET100P0DJ07 73 aa0.42□□□□□ -2.34
CASC4-210ENST00000559550 RNASE3P12724 160 aaKnown RBP0.42□□□□□ -2.34
CASC4-210ENST00000559550 CD40LGP29965 261 aa0.42□□□□□ -2.34
CASC4-210ENST00000559550 C10orf55Q5SWW7 151 aa0.42□□□□□ -2.34
CASC4-210ENST00000559550 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.42□□□□□ -2.34
CASC4-210ENST00000559550 SSX8Q7RTT4 187 aa0.42□□□□□ -2.34
CASC4-210ENST00000559550 UBL4BQ8N7F7 174 aa0.42□□□□□ -2.34
CASC4-210ENST00000559550 OR8B3Q8NGG8 313 aa0.42□□□□□ -2.34
CASC4-210ENST00000559550 HAVCR2Q8TDQ0 301 aa0.42□□□□□ -2.34
CASC4-210ENST00000559550 PACRGQ96M98 296 aaPredicted RBP0.42□□□□□ -2.34
CASC4-210ENST00000559550 CFAP45Q9UL16 551 aa0.42□□□□□ -2.34
CASC4-210ENST00000559550 ANAPC10Q9UM13 185 aa0.42□□□□□ -2.34
CASC4-210ENST00000559550 GREB1Q4ZG55 1949 aa0.41□□□□□ -2.34
CASC4-210ENST00000559550 A0A1B0GW54 56 aa0.41□□□□□ -2.34
CASC4-210ENST00000559550 TMEM212A6NML5 194 aa0.41□□□□□ -2.34
CASC4-210ENST00000559550 GEMIN2O14893 280 aaKnown RBP0.41□□□□□ -2.34
CASC4-210ENST00000559550 MSMBP08118 114 aa0.41□□□□□ -2.34
CASC4-210ENST00000559550 REG1BP48304 166 aa0.41□□□□□ -2.34
CASC4-210ENST00000559550 TNFAIP8L3Q5GJ75 292 aa0.41□□□□□ -2.34
CASC4-210ENST00000559550 SDHAF4Q5VUM1 108 aa0.41□□□□□ -2.34
CASC4-210ENST00000559550 KRTAP19-3Q7Z4W3 81 aa0.41□□□□□ -2.34
CASC4-210ENST00000559550 SYCE1Q8N0S2 351 aa0.41□□□□□ -2.34
CASC4-210ENST00000559550 ZNF676Q8N7Q3 588 aa0.41□□□□□ -2.34
CASC4-210ENST00000559550 OR5B17Q8NGF7 314 aa0.41□□□□□ -2.34
CASC4-210ENST00000559550 WDR54Q9H977 334 aa0.41□□□□□ -2.34
CASC4-210ENST00000559550 XAGE1AQ9HD64 81 aa0.41□□□□□ -2.34
CASC4-210ENST00000559550 KIF15Q9NS87 1388 aa0.41□□□□□ -2.34
CASC4-210ENST00000559550 TRBV10-2A0A0K0K1G8 114 aa0.4□□□□□ -2.35
CASC4-210ENST00000559550 LST1O00453 97 aa0.4□□□□□ -2.35
CASC4-210ENST00000559550 BIRC5O15392 142 aa0.4□□□□□ -2.35
CASC4-210ENST00000559550 HPGDSO60760 199 aa0.4□□□□□ -2.35
CASC4-210ENST00000559550 REG1AP05451 166 aa0.4□□□□□ -2.35
CASC4-210ENST00000559550 UGT2B7P16662 529 aa0.4□□□□□ -2.35
CASC4-210ENST00000559550 CCL1P22362 96 aa0.4□□□□□ -2.35
CASC4-210ENST00000559550 HLA-DMBP28068 263 aa0.4□□□□□ -2.35
CASC4-210ENST00000559550 TNFAIP6P98066 277 aaPredicted RBP0.4□□□□□ -2.35
CASC4-210ENST00000559550 C1orf194Q5T5A4 169 aa0.4□□□□□ -2.35
CASC4-210ENST00000559550 DHFR2Q86XF0 187 aa0.4□□□□□ -2.35
CASC4-210ENST00000559550 FUNDC1Q8IVP5 155 aa0.4□□□□□ -2.35
CASC4-210ENST00000559550 ZNF565Q8N9K5 539 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms