RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 OR6F1Q8NGZ6 308 aa6.33□□□□□ -1.4
SNX1-207ENST00000559401 TMEM167AQ8TBQ9 72 aa6.33□□□□□ -1.4
SNX1-207ENST00000559401 CMTM3Q96MX0 182 aa6.33□□□□□ -1.4
SNX1-207ENST00000559401 AIFM2Q9BRQ8 373 aa6.33□□□□□ -1.4
SNX1-207ENST00000559401 RSRP1Q9BUV0 290 aa6.33□□□□□ -1.4
SNX1-207ENST00000559401 TINAGL1Q9GZM7 467 aaPredicted RBP6.33□□□□□ -1.4
SNX1-207ENST00000559401 SCPEP1Q9HB40 452 aa6.33□□□□□ -1.4
SNX1-207ENST00000559401 EXTL2Q9UBQ6 330 aa6.33□□□□□ -1.4
SNX1-207ENST00000559401 HMX3A6NHT5 357 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 HPRT1P00492 218 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 PRH1P02810 166 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 RPA2P15927 270 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 ZP3P21754 424 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 S100GP29377 79 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 RCVRNP35243 200 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 INSL3P51460 131 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 ERVK-16P61578 105 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 CD69Q07108 199 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 DCTN2Q13561 401 aaKnown RBP6.32□□□□□ -1.4
SNX1-207ENST00000559401 EXOSC2Q13868 293 aaKnown RBP6.32□□□□□ -1.4
SNX1-207ENST00000559401 OR4A47Q6IF82 309 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 SLC25A42Q86VD7 318 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 CMTM1Q8IZ96 169 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 ADAD2Q8NCV1 583 aaKnown RBP6.32□□□□□ -1.4
SNX1-207ENST00000559401 DMBX1Q8NFW5 382 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 GPX8Q8TED1 209 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 MOB3AQ96BX8 217 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 OR4C12Q96R67 309 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 FXYD6Q9H0Q3 95 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 RANGRFQ9HD47 186 aaPredicted RBP6.32□□□□□ -1.4
SNX1-207ENST00000559401 ANAPC10Q9UM13 185 aa6.32□□□□□ -1.4
SNX1-207ENST00000559401 M0QYG6 137 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 GPR31O00270 319 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 RBFOX2O43251 390 aaKnown RBP eCLIP6.31□□□□□ -1.4
SNX1-207ENST00000559401 OR2J3O76001 311 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 S1PR2O95136 353 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 IFNA6P05013 189 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 MYOD1P15172 320 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 NQO2P16083 231 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 HLA-GP17693 338 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 NAT1P18440 290 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 GNRHRP30968 328 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 MAS1LP35410 378 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 ALDH3B2P48448 385 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 BRWD1-AS2P59051 145 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 TAS2R31P59538 309 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 RPL8P62917 257 aaKnown RBP6.31□□□□□ -1.4
SNX1-207ENST00000559401 RHOGP84095 191 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 ATP5G2Q06055 141 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 RPEL1Q2QD12 228 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 PHLDA2Q53GA4 152 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 ZNF429Q86V71 674 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 PUSL1Q8N0Z8 303 aaKnown RBP6.31□□□□□ -1.4
SNX1-207ENST00000559401 CD300LFQ8TDQ1 290 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 USMG5Q96IX5 58 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 ELOVL1Q9BW60 279 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 COMMD5Q9GZQ3 224 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 AKIP1Q9NQ31 210 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 PEF1Q9UBV8 284 aaKnown RBP6.31□□□□□ -1.4
SNX1-207ENST00000559401 SCOCQ9UIL1 159 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 ZNF256Q9Y2P7 627 aaPredicted RBP6.31□□□□□ -1.4
SNX1-207ENST00000559401 TNCP24821 2201 aa6.31□□□□□ -1.4
SNX1-207ENST00000559401 FAM223BA6NKX1 122 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 TEX22C9J3V5 150 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 PGLYRP1O75594 196 aaPredicted RBP6.3□□□□□ -1.4
SNX1-207ENST00000559401 DHFRP00374 187 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 TRBV12-3P01733 135 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 REG1AP05451 166 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 IL6RP08887 468 aaPredicted RBP6.3□□□□□ -1.4
SNX1-207ENST00000559401 DEFA4P12838 97 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 PGAM2P15259 253 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 AREGP15514 252 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 F2RP25116 425 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 SYNJ2BPP57105 145 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 SPCS2Q15005 226 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 RNASE10Q5GAN6 216 aaKnown RBP6.3□□□□□ -1.4
SNX1-207ENST00000559401 LPCAT3Q6P1A2 487 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 ACSM6Q6P461 480 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 DHRS11Q6UWP2 260 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 C19orf35Q6ZS72 473 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 HAPLN4Q86UW8 402 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 LYSMD2Q8IV50 215 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 FAM223AQ8IWN6 122 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 TTC9CQ8N5M4 171 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 NECAP1Q8NC96 275 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 OR6Q1Q8NGQ2 317 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 OR4A5Q8NH83 315 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 RAB2BQ8WUD1 216 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 HINT2Q9BX68 163 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 PLEKHA2Q9HB19 425 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 TMEM140Q9NV12 185 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 BET1LQ9NYM9 111 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 COMMD9Q9P000 198 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 FBXL7Q9UJT9 491 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 ADAM30Q9UKF2 790 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 ZNF257Q9Y2Q1 563 aa6.3□□□□□ -1.4
SNX1-207ENST00000559401 TRAV3A0A0B4J244 114 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 MARCH11A6NNE9 402 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 E7EUB6 86 aa6.29□□□□□ -1.4
SNX1-207ENST00000559401 UPK2O00526 184 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms