RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 C11orf68Q9H3H3 251 aaKnown RBP11.93□□□□□ -0.5
SPG11-210ENST00000558319 MRPS16Q9Y3D3 137 aaKnown RBP11.93□□□□□ -0.5
SPG11-210ENST00000558319 TRBV9A0A0B4J1U6 114 aa11.93□□□□□ -0.5
SPG11-210ENST00000558319 PPIAL4CA0A0B4J2A2 164 aa11.93□□□□□ -0.5
SPG11-210ENST00000558319 WNT9BO14905 357 aa11.93□□□□□ -0.5
SPG11-210ENST00000558319 PPIAL4GP0DN37 164 aa11.93□□□□□ -0.5
SPG11-210ENST00000558319 LDLRAD2Q5SZI1 272 aa11.93□□□□□ -0.5
SPG11-210ENST00000558319 INO80CQ6PI98 192 aaPredicted RBP11.93□□□□□ -0.5
SPG11-210ENST00000558319 WFDC6Q9BQY6 131 aa11.93□□□□□ -0.5
SPG11-210ENST00000558319 SF3B6Q9Y3B4 125 aaKnown RBP11.93□□□□□ -0.5
SPG11-210ENST00000558319 FGF12P61328 243 aa11.93□□□□□ -0.5
SPG11-210ENST00000558319 FBLN7Q53RD9 439 aa11.93□□□□□ -0.5
SPG11-210ENST00000558319 C19orf67A6NJJ6 358 aa11.93□□□□□ -0.5
SPG11-210ENST00000558319 PCOLCEQ15113 449 aa11.93□□□□□ -0.5
SPG11-210ENST00000558319 ZNF818PQ6ZRF7 136 aa11.93□□□□□ -0.5
SPG11-210ENST00000558319 PLSCR2Q9NRY7 297 aa11.93□□□□□ -0.5
SPG11-210ENST00000558319 SCO2A0A1W2PP80 73 aa11.92□□□□□ -0.5
SPG11-210ENST00000558319 HOXC4P09017 264 aaPredicted RBP11.92□□□□□ -0.5
SPG11-210ENST00000558319 WDYHV1Q96HA8 205 aa11.92□□□□□ -0.5
SPG11-210ENST00000558319 RAMP1O60894 148 aa11.92□□□□□ -0.5
SPG11-210ENST00000558319 CD24P25063 80 aa11.92□□□□□ -0.5
SPG11-210ENST00000558319 RPL8P62917 257 aaKnown RBP11.92□□□□□ -0.5
SPG11-210ENST00000558319 PTPRZ1P23471 2315 aaPredicted RBP11.92□□□□□ -0.5
SPG11-210ENST00000558319 NPFFO15130 113 aa11.92□□□□□ -0.5
SPG11-210ENST00000558319 GCHFRP30047 84 aa11.92□□□□□ -0.5
SPG11-210ENST00000558319 CEACAM21Q3KPI0 293 aa11.92□□□□□ -0.5
SPG11-210ENST00000558319 CALYQ9NYX4 217 aa11.92□□□□□ -0.5
SPG11-210ENST00000558319 ZNF646O15015 1829 aaPredicted RBP11.92□□□□□ -0.5
SPG11-210ENST00000558319 RPS11P62280 158 aaKnown RBP eCLIP11.92□□□□□ -0.5
SPG11-210ENST00000558319 ZNF124Q15973 351 aa11.92□□□□□ -0.5
SPG11-210ENST00000558319 FHL5Q5TD97 284 aa11.92□□□□□ -0.5
SPG11-210ENST00000558319 LURAP1LQ8IV03 231 aa11.92□□□□□ -0.5
SPG11-210ENST00000558319 STPG3Q8N7X2 389 aa11.92□□□□□ -0.5
SPG11-210ENST00000558319 COPS9Q8WXC6 57 aa11.92□□□□□ -0.5
SPG11-210ENST00000558319 LIPFP07098 398 aa11.92□□□□□ -0.5
SPG11-210ENST00000558319 TEX29Q8N6K0 151 aa11.92□□□□□ -0.5
SPG11-210ENST00000558319 DNASE2BQ8WZ79 361 aa11.92□□□□□ -0.5
SPG11-210ENST00000558319 SLC25A45Q8N413 288 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 AICDAQ9GZX7 198 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 SRD5A1P18405 259 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 ATP5G2Q06055 141 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 PRSS53Q2L4Q9 553 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 PRELID3AQ96N28 172 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 KIR2DL4Q99706 377 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 LAMTOR2Q9Y2Q5 125 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 CELA3AP09093 270 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 FGF5P12034 268 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 C2orf68Q2NKX9 166 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 NABP2Q9BQ15 211 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 ELOVL5Q9NYP7 299 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 LOC105371242A0A075B767 164 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 C10orf128Q5T292 105 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 PKD1L3Q7Z443 1732 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 NHP2Q9NX24 153 aaKnown RBP11.91□□□□□ -0.5
SPG11-210ENST00000558319 CXorf51AA0A1B0GTR3 108 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 LINC00305Q7Z4B0 112 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 ZNRF1Q8ND25 227 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 ZNF501Q96CX3 271 aaPredicted RBP11.91□□□□□ -0.5
SPG11-210ENST00000558319 MYO16Q9Y6X6 1858 aa11.91□□□□□ -0.5
SPG11-210ENST00000558319 TIAF1O95411 115 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 TMEM50AO95807 157 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 CGAP01215 116 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 IGHV3-11P01762 117 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 SRSF4Q08170 494 aaKnown RBP11.9□□□□□ -0.5
SPG11-210ENST00000558319 SIGMAR1Q99720 223 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 POLR2AP24928 1970 aaKnown RBP11.9□□□□□ -0.5
SPG11-210ENST00000558319 M0R381 172 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 SP9P0CG40 484 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 ZP1P60852 638 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 PSG9Q00887 426 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 TMEM187Q14656 261 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 PRR31Q5SQ13 230 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 OR51G1Q8NGK1 321 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 SCGB3A1Q96QR1 104 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 IL36BQ9NZH7 164 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 TRAV21A0A0B4J279 112 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 RPS20P60866 119 aaKnown RBP11.9□□□□□ -0.5
SPG11-210ENST00000558319 FAM27E3Q08E93 113 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 NSUN5P1Q3KNT7 163 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 FAM214BQ7L5A3 538 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 CDKN1AP38936 164 aa11.9□□□□□ -0.5
SPG11-210ENST00000558319 MSGN1A6NI15 193 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 ADMP35318 185 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 SRSF3P84103 164 aaKnown RBP11.89□□□□□ -0.51
SPG11-210ENST00000558319 RPL39P5Q59GN2 51 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 SDHCQ99643 169 aaPredicted RBP11.89□□□□□ -0.51
SPG11-210ENST00000558319 TRBV5-5A0A0J9YX44 114 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 MARCH11A6NNE9 402 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 CA11O75493 328 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 GPR183P32249 361 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 TFF3Q07654 80 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 KIR3DL3Q8N743 410 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 POC1AQ8NBT0 407 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 TXNDC17Q9BRA2 123 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 TOMM7Q9P0U1 55 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 HOXA5P20719 270 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 UCP3P55916 312 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 GFI1BQ5VTD9 330 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 NEUROG1Q92886 237 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 IGKV1-8A0A0C4DH67 115 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms