RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 TNFSF10P50591 281 aa10.27□□□□□ -0.76
LDLR-205ENST00000557933 PSG7Q13046 419 aa10.27□□□□□ -0.76
LDLR-205ENST00000557933 CACNA1BQ00975 2339 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 IGHV3OR15-7A0A075B7D8 119 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 CDX4O14627 284 aaPredicted RBP10.27□□□□□ -0.77
LDLR-205ENST00000557933 IGHV3-48P01763 117 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 CD59P13987 128 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 PAX1P15863 534 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 NBL1P41271 181 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 ERVFC1-1P60608 527 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 PDLIM3Q53GG5 364 aaPredicted RBP10.27□□□□□ -0.77
LDLR-205ENST00000557933 FAM201AQ5SY85 155 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 ABHD17BQ5VST6 288 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 FAM19A2Q8N3H0 131 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 COQ2Q96H96 371 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 ACY3Q96HD9 319 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 TMEM208Q9BTX3 173 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 MS4A5Q9H3V2 200 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 BOKQ9UMX3 212 aaPredicted RBP10.27□□□□□ -0.77
LDLR-205ENST00000557933 TANC2Q9HCD6 1990 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 K7EN84 100 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 FCN1O00602 326 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 RPL31P62899 125 aaKnown RBP10.27□□□□□ -0.77
LDLR-205ENST00000557933 ACOT6Q3I5F7 207 aaPredicted RBP10.27□□□□□ -0.77
LDLR-205ENST00000557933 PRAMEF5Q5TYX0 476 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 TGIF2LYQ8IUE0 185 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 ZNF645Q8N7E2 425 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 BTF3L4Q96K17 158 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 WNT10AQ9GZT5 417 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 RNASE7Q9H1E1 156 aaKnown RBP10.27□□□□□ -0.77
LDLR-205ENST00000557933 ELOVL5Q9NYP7 299 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 ZNRD1Q9P1U0 126 aa10.27□□□□□ -0.77
LDLR-205ENST00000557933 LRBAP50851 2863 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 DNPH1O43598 174 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 OR10J4P0C629 311 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 MSMO1Q15800 293 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 MAJINQ3KP22 176 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 MRPL54Q6P161 138 aaKnown RBP10.26□□□□□ -0.77
LDLR-205ENST00000557933 SAXO1Q8IYX7 474 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 OR8I2Q8N0Y5 310 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 CISD2Q8N5K1 135 aaKnown RBP10.26□□□□□ -0.77
LDLR-205ENST00000557933 Q8N7P7 452 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 AGMATQ9BSE5 352 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 RTL8AQ9BWD3 113 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 FOXJ2Q9P0K8 574 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 GNG12Q9UBI6 72 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 OR5B21A6NL26 309 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 SNURFLB1AK76 121 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 MBP02144 154 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 CNEP1R1Q8N9A8 125 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 FAM216AQ8WUB2 273 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 R3HDM4Q96D70 268 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 ANAPC16Q96DE5 110 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 SGK494Q96LW2 274 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 GCM1Q9NP62 436 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 PXMP4Q9Y6I8 212 aa10.26□□□□□ -0.77
LDLR-205ENST00000557933 TGOLN2O43493 480 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 PROP1O75360 226 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 COA6Q5JTJ3 125 aaKnown RBP10.25□□□□□ -0.77
LDLR-205ENST00000557933 DMRTA1Q5VZB9 504 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 PIP4P1Q86T03 277 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 Q8TCH9 128 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 MRPL18Q9H0U6 180 aaKnown RBP10.25□□□□□ -0.77
LDLR-205ENST00000557933 TUBG2Q9NRH3 451 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 MPC1Q9Y5U8 109 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 MED13LQ71F56 2210 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 M0R1X1 148 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 CRISP2P16562 243 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 NTF3P20783 257 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 TCF15Q12870 199 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 FOXF2Q12947 444 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 MLANAQ16655 118 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 RNFT1Q5M7Z0 435 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 DCAF12Q5T6F0 453 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 OR4P4Q8NGL7 312 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 ZCCHC14Q8WYQ9 949 aaKnown RBP10.25□□□□□ -0.77
LDLR-205ENST00000557933 TMEM68Q96MH6 324 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 RCHY1Q96PM5 261 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 ZPBPQ9BS86 351 aa10.25□□□□□ -0.77
LDLR-205ENST00000557933 MLNRO43193 412 aa10.24□□□□□ -0.77
LDLR-205ENST00000557933 CGAP01215 116 aa10.24□□□□□ -0.77
LDLR-205ENST00000557933 PDLIM4P50479 330 aa10.24□□□□□ -0.77
LDLR-205ENST00000557933 TREML4Q6UXN2 200 aa10.24□□□□□ -0.77
LDLR-205ENST00000557933 MGST2Q99735 147 aa10.24□□□□□ -0.77
LDLR-205ENST00000557933 DYSFO75923 2080 aa10.24□□□□□ -0.77
LDLR-205ENST00000557933 SMPD2O60906 423 aa10.24□□□□□ -0.77
LDLR-205ENST00000557933 ARR3P36575 388 aa10.24□□□□□ -0.77
LDLR-205ENST00000557933 SOX8P57073 446 aa10.24□□□□□ -0.77
LDLR-205ENST00000557933 MMDQ15546 238 aa10.24□□□□□ -0.77
LDLR-205ENST00000557933 C1orf194Q5T5A4 169 aa10.24□□□□□ -0.77
LDLR-205ENST00000557933 ZNRF1Q8ND25 227 aa10.24□□□□□ -0.77
LDLR-205ENST00000557933 OR10G8Q8NGN5 311 aa10.24□□□□□ -0.77
LDLR-205ENST00000557933 OR1L6Q8NGR2 347 aa10.24□□□□□ -0.77
LDLR-205ENST00000557933 UHRF2Q96PU4 802 aa10.24□□□□□ -0.77
LDLR-205ENST00000557933 SSBP3Q9BWW4 388 aaPredicted RBP10.24□□□□□ -0.77
LDLR-205ENST00000557933 HIPK2Q9H2X6 1198 aa10.24□□□□□ -0.77
LDLR-205ENST00000557933 SERTAD4Q9NUC0 356 aa10.24□□□□□ -0.77
LDLR-205ENST00000557933 CATR1Q13166 79 aa10.23□□□□□ -0.77
LDLR-205ENST00000557933 C1orf229Q6ZS94 237 aaPredicted RBP10.23□□□□□ -0.77
LDLR-205ENST00000557933 ST6GALNAC3Q8NDV1 305 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms