RNA–Protein interactions for RNA: ENST00000557657.5

TMEM260-216, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-216ENST00000557657 C16orf82Q7Z2V1 217 aa17.45■□□□□ 0.38
TMEM260-216ENST00000557657 FRZBQ92765 325 aa17.45■□□□□ 0.38
TMEM260-216ENST00000557657 ELOVL1Q9BW60 279 aa17.45■□□□□ 0.38
TMEM260-216ENST00000557657 MS4A5Q9H3V2 200 aa17.45■□□□□ 0.38
TMEM260-216ENST00000557657 A8MXE2 369 aa17.45■□□□□ 0.38
TMEM260-216ENST00000557657 GFRA3O60609 400 aa17.45■□□□□ 0.38
TMEM260-216ENST00000557657 S100A9P06702 114 aaKnown RBP17.45■□□□□ 0.38
TMEM260-216ENST00000557657 CD40P25942 277 aa17.45■□□□□ 0.38
TMEM260-216ENST00000557657 EIF2S3P41091 472 aaKnown RBP17.45■□□□□ 0.38
TMEM260-216ENST00000557657 TREML4Q6UXN2 200 aa17.45■□□□□ 0.38
TMEM260-216ENST00000557657 DDB2Q92466 427 aa17.45■□□□□ 0.38
TMEM260-216ENST00000557657 GFOD1Q9NXC2 390 aa17.45■□□□□ 0.38
TMEM260-216ENST00000557657 RNF7Q9UBF6 113 aa17.45■□□□□ 0.38
TMEM260-216ENST00000557657 WDR83OSQ9Y284 106 aa17.45■□□□□ 0.38
TMEM260-216ENST00000557657 DYSFO75923 2080 aa17.45■□□□□ 0.38
TMEM260-216ENST00000557657 S100A8P05109 93 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 CDC34P49427 236 aaPredicted RBP17.44■□□□□ 0.38
TMEM260-216ENST00000557657 ERVK-16P61578 105 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 RPL23P62829 140 aaKnown RBP17.44■□□□□ 0.38
TMEM260-216ENST00000557657 PNRC1Q12796 327 aaPredicted RBP17.44■□□□□ 0.38
TMEM260-216ENST00000557657 MIC13Q5XKP0 118 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 CDPF1Q6NVV7 123 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 ZNF383Q8NA42 475 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 SSMEM1Q8WWF3 244 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 GAFA1Q96PS6 74 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 ZNF251Q9BRH9 671 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 HINT2Q9BX68 163 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 KBTBD11-OT1A0A1B0GTJ5 212 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 B4DEV8 164 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 SPCS3P61009 180 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 TMEM241Q24JQ0 296 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 C1orf174Q8IYL3 243 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 FAM122AQ96E09 287 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 RHOVQ96L33 236 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 TCF19Q9Y242 345 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 POLEQ07864 2286 aa17.44■□□□□ 0.38
TMEM260-216ENST00000557657 KBTBD11O94819 623 aa17.43■□□□□ 0.38
TMEM260-216ENST00000557657 SMIM6P0DI80 62 aa17.43■□□□□ 0.38
TMEM260-216ENST00000557657 TIMP3P35625 211 aa17.43■□□□□ 0.38
TMEM260-216ENST00000557657 ATP5G3P48201 142 aa17.43■□□□□ 0.38
TMEM260-216ENST00000557657 STUMQ69YW2 141 aa17.43■□□□□ 0.38
TMEM260-216ENST00000557657 C1orf159Q96HA4 380 aa17.43■□□□□ 0.38
TMEM260-216ENST00000557657 MGST2Q99735 147 aa17.43■□□□□ 0.38
TMEM260-216ENST00000557657 DERL1Q9BUN8 251 aa17.43■□□□□ 0.38
TMEM260-216ENST00000557657 NAT8Q9UHE5 227 aa17.43■□□□□ 0.38
TMEM260-216ENST00000557657 LRBAP50851 2863 aa17.43■□□□□ 0.38
TMEM260-216ENST00000557657 TRGC1P0CF51 173 aa17.43■□□□□ 0.38
TMEM260-216ENST00000557657 HOXA5P20719 270 aa17.43■□□□□ 0.38
TMEM260-216ENST00000557657 WFDC8Q8IUA0 241 aa17.43■□□□□ 0.38
TMEM260-216ENST00000557657 C1orf87Q8N0U7 546 aa17.43■□□□□ 0.38
TMEM260-216ENST00000557657 PRSS33Q8NF86 280 aa17.43■□□□□ 0.38
TMEM260-216ENST00000557657 CEACAM8P31997 349 aaPredicted RBP17.42■□□□□ 0.38
TMEM260-216ENST00000557657 RND2P52198 227 aa17.42■□□□□ 0.38
TMEM260-216ENST00000557657 OR4A47Q6IF82 309 aa17.42■□□□□ 0.38
TMEM260-216ENST00000557657 CYP2G1PQ6ZSU1 146 aa17.42■□□□□ 0.38
TMEM260-216ENST00000557657 TLN1Q9Y490 2541 aaKnown RBP17.42■□□□□ 0.38
TMEM260-216ENST00000557657 PGPEP1LA6NFU8 196 aa17.42■□□□□ 0.38
TMEM260-216ENST00000557657 PRSS46E5RG02 174 aa17.42■□□□□ 0.38
TMEM260-216ENST00000557657 MBP02144 154 aa17.42■□□□□ 0.38
TMEM260-216ENST00000557657 TANC2Q9HCD6 1990 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 A0A0G2JNJ9 132 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 LINC00587B1AMM8 73 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 C11orf94C9JXX5 98 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 IGKV1-16P04430 117 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 SOD3P08294 240 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 RD3LP0DJH9 198 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 MRPS11P82912 194 aaKnown RBP17.41■□□□□ 0.38
TMEM260-216ENST00000557657 BSXQ3C1V8 233 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 CISD2Q8N5K1 135 aaKnown RBP17.41■□□□□ 0.38
TMEM260-216ENST00000557657 RND1Q92730 232 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 Q9UFV3 132 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 TRGV10A0A0A0MS01 117 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 C17orf112F2Z3M2 114 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 AARDQ4LEZ3 155 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 CST9LP1Q5W188 147 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 FAM57AQ8TBR7 257 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 FAM222BQ8WU58 562 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 SFXN3Q9BWM7 321 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 GSN-AS1Q9NRJ2 163 aa17.41■□□□□ 0.38
TMEM260-216ENST00000557657 TMPRSS2O15393 492 aa17.4■□□□□ 0.38
TMEM260-216ENST00000557657 ACOT6Q3I5F7 207 aaPredicted RBP17.4■□□□□ 0.38
TMEM260-216ENST00000557657 ZCCHC14Q8WYQ9 949 aaKnown RBP17.4■□□□□ 0.38
TMEM260-216ENST00000557657 ABHD17AQ96GS6 310 aa17.4■□□□□ 0.38
TMEM260-216ENST00000557657 GPR61Q9BZJ8 451 aa17.4■□□□□ 0.38
TMEM260-216ENST00000557657 GATA4P43694 442 aa17.4■□□□□ 0.38
TMEM260-216ENST00000557657 MOB3BQ86TA1 216 aa17.4■□□□□ 0.38
TMEM260-216ENST00000557657 DOLPP1Q86YN1 238 aa17.4■□□□□ 0.38
TMEM260-216ENST00000557657 NDUFB7P17568 137 aa17.39■□□□□ 0.38
TMEM260-216ENST00000557657 ARSJQ5FYB0 599 aaPredicted RBP17.39■□□□□ 0.38
TMEM260-216ENST00000557657 SPATA31B1PQ5VZV4 182 aa17.39■□□□□ 0.38
TMEM260-216ENST00000557657 OR4S2Q8NH73 311 aa17.39■□□□□ 0.38
TMEM260-216ENST00000557657 GGTLC1Q9BX51 225 aa17.39■□□□□ 0.38
TMEM260-216ENST00000557657 MIOXQ9UGB7 285 aa17.39■□□□□ 0.38
TMEM260-216ENST00000557657 IL19Q9UHD0 177 aa17.39■□□□□ 0.38
TMEM260-216ENST00000557657 DCHS2Q6V1P9 2916 aa17.39■□□□□ 0.38
TMEM260-216ENST00000557657 SRRM4A7MD48 611 aaKnown RBP17.39■□□□□ 0.37
TMEM260-216ENST00000557657 FCN3O75636 299 aa17.39■□□□□ 0.37
TMEM260-216ENST00000557657 FABP1P07148 127 aa17.39■□□□□ 0.37
TMEM260-216ENST00000557657 PMS2P11Q13670 270 aa17.39■□□□□ 0.37
TMEM260-216ENST00000557657 C15orf61A6NNL5 157 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms