RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 OR52B4Q8NGK2 314 aa12.08□□□□□ -0.48
NEDD1-213ENST00000557644 LINC01006Q8NI28 216 aa12.08□□□□□ -0.48
NEDD1-213ENST00000557644 ZNF430Q9H8G1 570 aaPredicted RBP12.08□□□□□ -0.48
NEDD1-213ENST00000557644 TENM1Q9UKZ4 2725 aa12.07□□□□□ -0.48
NEDD1-213ENST00000557644 B3GALNT1O75752 331 aa12.07□□□□□ -0.48
NEDD1-213ENST00000557644 SFT2D2O95562 160 aa12.07□□□□□ -0.48
NEDD1-213ENST00000557644 IGHG2P01859 326 aa12.07□□□□□ -0.48
NEDD1-213ENST00000557644 HLA-AP01891 365 aaKnown RBP12.07□□□□□ -0.48
NEDD1-213ENST00000557644 ERVK-16P61578 105 aa12.07□□□□□ -0.48
NEDD1-213ENST00000557644 CX3CL1P78423 397 aa12.07□□□□□ -0.48
NEDD1-213ENST00000557644 DHRS2Q13268 280 aa12.07□□□□□ -0.48
NEDD1-213ENST00000557644 PRSS8Q16651 343 aa12.07□□□□□ -0.48
NEDD1-213ENST00000557644 ANKRD55Q3KP44 614 aa12.07□□□□□ -0.48
NEDD1-213ENST00000557644 C4orf46Q504U0 113 aa12.07□□□□□ -0.48
NEDD1-213ENST00000557644 ARSJQ5FYB0 599 aaPredicted RBP12.07□□□□□ -0.48
NEDD1-213ENST00000557644 TMEM268Q5VZI3 342 aa12.07□□□□□ -0.48
NEDD1-213ENST00000557644 SELENOHQ8IZQ5 122 aaKnown RBP12.07□□□□□ -0.48
NEDD1-213ENST00000557644 NSG2Q9Y328 171 aa12.07□□□□□ -0.48
NEDD1-213ENST00000557644 C9orf170A2RU37 121 aa12.07□□□□□ -0.48
NEDD1-213ENST00000557644 MYOD1P15172 320 aa12.07□□□□□ -0.48
NEDD1-213ENST00000557644 SLC35E3Q7Z769 313 aa12.07□□□□□ -0.48
NEDD1-213ENST00000557644 OR2T6Q8NHC8 308 aa12.07□□□□□ -0.48
NEDD1-213ENST00000557644 NOL4LQ96MY1 436 aaPredicted RBP12.07□□□□□ -0.48
NEDD1-213ENST00000557644 SERTAD4Q9NUC0 356 aa12.07□□□□□ -0.48
NEDD1-213ENST00000557644 A0A0G2JRQ6 117 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 ANXA3P12429 323 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 UBE2MP61081 183 aaKnown RBP12.06□□□□□ -0.48
NEDD1-213ENST00000557644 PLET1Q6UQ28 207 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 ZNF695Q8IW36 515 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 OR4F5Q8NH21 305 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 VSTM2AQ8TAG5 236 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 TMEM167AQ8TBQ9 72 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 RBPMSQ93062 196 aaKnown RBP12.06□□□□□ -0.48
NEDD1-213ENST00000557644 TMEM56Q96MV1 263 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 FAM103A1Q9BTL3 118 aaKnown RBP12.06□□□□□ -0.48
NEDD1-213ENST00000557644 C16orf95Q9H693 158 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 BET1LQ9NYM9 111 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 FBXO7Q9Y3I1 522 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 TMEM56-RWDD3S4R434 201 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 IL6RP08887 468 aaPredicted RBP12.06□□□□□ -0.48
NEDD1-213ENST00000557644 OR9G9P0C7N8 305 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 AKR1C2P52895 323 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 C10orf55Q5SWW7 151 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 ZNF562Q6V9R5 426 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 SLC35G3Q8N808 338 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 SEC22CQ9BRL7 303 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 AIFM2Q9BRQ8 373 aa12.06□□□□□ -0.48
NEDD1-213ENST00000557644 ALX4Q9H161 411 aaPredicted RBP12.06□□□□□ -0.48
NEDD1-213ENST00000557644 ATP6V0E1O15342 81 aa12.05□□□□□ -0.48
NEDD1-213ENST00000557644 VDAC2P45880 294 aaPredicted RBP12.05□□□□□ -0.48
NEDD1-213ENST00000557644 TNXAQ16473 311 aa12.05□□□□□ -0.48
NEDD1-213ENST00000557644 LYZL2Q7Z4W2 148 aa12.05□□□□□ -0.48
NEDD1-213ENST00000557644 LYG2Q86SG7 212 aa12.05□□□□□ -0.48
NEDD1-213ENST00000557644 TMEM158Q8WZ71 300 aa12.05□□□□□ -0.48
NEDD1-213ENST00000557644 OR51J1Q9H342 316 aa12.05□□□□□ -0.48
NEDD1-213ENST00000557644 PARP11Q9NR21 331 aa12.05□□□□□ -0.48
NEDD1-213ENST00000557644 UPK2O00526 184 aa12.05□□□□□ -0.48
NEDD1-213ENST00000557644 CNIH1O95406 144 aa12.05□□□□□ -0.48
NEDD1-213ENST00000557644 PTTG1O95997 202 aa12.05□□□□□ -0.48
NEDD1-213ENST00000557644 OPN1MWP04001 364 aa12.05□□□□□ -0.48
NEDD1-213ENST00000557644 OPN1MW2P0DN77 364 aa12.05□□□□□ -0.48
NEDD1-213ENST00000557644 OPN1MW3P0DN78 364 aa12.05□□□□□ -0.48
NEDD1-213ENST00000557644 MECP2P51608 486 aaKnown RBP12.05□□□□□ -0.48
NEDD1-213ENST00000557644 FXYD3Q14802 87 aa12.05□□□□□ -0.48
NEDD1-213ENST00000557644 H2BFWTQ7Z2G1 175 aa12.05□□□□□ -0.48
NEDD1-213ENST00000557644 GRPEL2Q8TAA5 225 aa12.05□□□□□ -0.48
NEDD1-213ENST00000557644 MARVELD1Q9BSK0 173 aa12.05□□□□□ -0.48
NEDD1-213ENST00000557644 TMEM89A2RUT3 159 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 DBX1A6NMT0 343 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 E7EUB6 86 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 P0C879 139 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 EGR2P11161 476 aaPredicted RBP12.04□□□□□ -0.48
NEDD1-213ENST00000557644 OR2B8PP59922 312 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 RPL8P62917 257 aaKnown RBP12.04□□□□□ -0.48
NEDD1-213ENST00000557644 MMD2Q8IY49 270 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 LGI3Q8N145 548 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 MDFIQ99750 246 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 RNF114Q9Y508 228 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 CLPSL1A2RUU4 121 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 INMT-MINDY4F8WBC2 141 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 HAX1O00165 279 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 APELAP0DMC3 54 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 Q6ZRM9 215 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 OR4A5Q8NH83 315 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 RNASE11Q8TAA1 199 aaKnown RBP12.04□□□□□ -0.48
NEDD1-213ENST00000557644 ABHD5Q8WTS1 349 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 ARPC1AQ92747 370 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 WSB1Q9Y6I7 421 aa12.04□□□□□ -0.48
NEDD1-213ENST00000557644 G3V318 75 aa12.03□□□□□ -0.48
NEDD1-213ENST00000557644 KCNAB3O43448 404 aa12.03□□□□□ -0.48
NEDD1-213ENST00000557644 HLA-GP17693 338 aa12.03□□□□□ -0.48
NEDD1-213ENST00000557644 C10orf99Q6UWK7 81 aa12.03□□□□□ -0.48
NEDD1-213ENST00000557644 IL22RA2Q969J5 263 aa12.03□□□□□ -0.48
NEDD1-213ENST00000557644 RRNAD1Q96FB5 475 aaKnown RBP12.03□□□□□ -0.48
NEDD1-213ENST00000557644 A0A0B4J293 547 aa12.03□□□□□ -0.48
NEDD1-213ENST00000557644 ACTL6BO94805 426 aa12.03□□□□□ -0.48
NEDD1-213ENST00000557644 DUS4LO95620 317 aaKnown RBP12.03□□□□□ -0.48
NEDD1-213ENST00000557644 COMPP49747 757 aaPredicted RBP12.03□□□□□ -0.48
NEDD1-213ENST00000557644 FOXL1Q12952 345 aa12.03□□□□□ -0.48
NEDD1-213ENST00000557644 RGS21Q2M5E4 152 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms