RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 KCTD12Q96CX2 325 aaKnown RBP12.71□□□□□ -0.37
VSX1-207ENST00000557285 OR4C12Q96R67 309 aa12.71□□□□□ -0.37
VSX1-207ENST00000557285 HRASLSQ9HDD0 168 aa12.71□□□□□ -0.37
VSX1-207ENST00000557285 ADAM30Q9UKF2 790 aa12.71□□□□□ -0.37
VSX1-207ENST00000557285 SMIM31A0A1B0GVY4 71 aa12.7□□□□□ -0.38
VSX1-207ENST00000557285 DPPA5A6NC42 116 aa12.7□□□□□ -0.38
VSX1-207ENST00000557285 FAM25AB3EWG3 89 aa12.7□□□□□ -0.38
VSX1-207ENST00000557285 FAM25CB3EWG5 89 aa12.7□□□□□ -0.38
VSX1-207ENST00000557285 FAM25GB3EWG6 89 aa12.7□□□□□ -0.38
VSX1-207ENST00000557285 ZP3P21754 424 aa12.7□□□□□ -0.38
VSX1-207ENST00000557285 SYNJ2BPP57105 145 aa12.7□□□□□ -0.38
VSX1-207ENST00000557285 ZNF45Q02386 682 aa12.7□□□□□ -0.38
VSX1-207ENST00000557285 CATR1Q13166 79 aa12.7□□□□□ -0.38
VSX1-207ENST00000557285 EXOSC2Q13868 293 aaKnown RBP12.7□□□□□ -0.38
VSX1-207ENST00000557285 GPR107Q5VW38 600 aa12.7□□□□□ -0.38
VSX1-207ENST00000557285 PUSL1Q8N0Z8 303 aaKnown RBP12.7□□□□□ -0.38
VSX1-207ENST00000557285 ZBTB34Q8NCN2 500 aa12.7□□□□□ -0.38
VSX1-207ENST00000557285 TMEM167AQ8TBQ9 72 aa12.7□□□□□ -0.38
VSX1-207ENST00000557285 USMG5Q96IX5 58 aa12.7□□□□□ -0.38
VSX1-207ENST00000557285 ASCL2Q99929 193 aa12.7□□□□□ -0.38
VSX1-207ENST00000557285 ELOVL1Q9BW60 279 aa12.7□□□□□ -0.38
VSX1-207ENST00000557285 AKIP1Q9NQ31 210 aa12.7□□□□□ -0.38
VSX1-207ENST00000557285 PEF1Q9UBV8 284 aaKnown RBP12.7□□□□□ -0.38
VSX1-207ENST00000557285 E7EUB6 86 aa12.69□□□□□ -0.38
VSX1-207ENST00000557285 OR2J3O76001 311 aa12.69□□□□□ -0.38
VSX1-207ENST00000557285 RLN1P04808 185 aa12.69□□□□□ -0.38
VSX1-207ENST00000557285 REG1AP05451 166 aa12.69□□□□□ -0.38
VSX1-207ENST00000557285 ELK1P19419 428 aa12.69□□□□□ -0.38
VSX1-207ENST00000557285 HRH1P35367 487 aa12.69□□□□□ -0.38
VSX1-207ENST00000557285 RORCP51449 518 aa12.69□□□□□ -0.38
VSX1-207ENST00000557285 TAS2R46P59540 309 aa12.69□□□□□ -0.38
VSX1-207ENST00000557285 ATP5G2Q06055 141 aa12.69□□□□□ -0.38
VSX1-207ENST00000557285 MSMO1Q15800 293 aa12.69□□□□□ -0.38
VSX1-207ENST00000557285 OR4A47Q6IF82 309 aa12.69□□□□□ -0.38
VSX1-207ENST00000557285 ZNF343Q6P1L6 599 aa12.69□□□□□ -0.38
VSX1-207ENST00000557285 OR6Q1Q8NGQ2 317 aa12.69□□□□□ -0.38
VSX1-207ENST00000557285 LSM4Q9Y4Z0 139 aaKnown RBP12.69□□□□□ -0.38
VSX1-207ENST00000557285 TEX22C9J3V5 150 aa12.68□□□□□ -0.38
VSX1-207ENST00000557285 APOA1P02647 267 aa12.68□□□□□ -0.38
VSX1-207ENST00000557285 IL6RP08887 468 aaPredicted RBP12.68□□□□□ -0.38
VSX1-207ENST00000557285 AREGP15514 252 aa12.68□□□□□ -0.38
VSX1-207ENST00000557285 HLA-GP17693 338 aa12.68□□□□□ -0.38
VSX1-207ENST00000557285 GNRHRP30968 328 aa12.68□□□□□ -0.38
VSX1-207ENST00000557285 RPL8P62917 257 aaKnown RBP12.68□□□□□ -0.38
VSX1-207ENST00000557285 RPEL1Q2QD12 228 aa12.68□□□□□ -0.38
VSX1-207ENST00000557285 VAX1Q5SQQ9 334 aa12.68□□□□□ -0.38
VSX1-207ENST00000557285 ANKRD13BQ86YJ7 626 aa12.68□□□□□ -0.38
VSX1-207ENST00000557285 DMBX1Q8NFW5 382 aa12.68□□□□□ -0.38
VSX1-207ENST00000557285 ANAPC10Q9UM13 185 aa12.68□□□□□ -0.38
VSX1-207ENST00000557285 TRAV3A0A0B4J244 114 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 A0A1B0GW64 132 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 FAM223BA6NKX1 122 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 S1PR2O95136 353 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 GABARAPO95166 117 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 IGHV3-23P01764 117 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 GP9P14770 177 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 NAT1P18440 290 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 TSPAN5P62079 268 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 CTF1Q16619 201 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 C15orf32Q32M92 178 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 PHLDA2Q53GA4 152 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 MZT2AQ6P582 158 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 SLC25A42Q86VD7 318 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 LYSMD2Q8IV50 215 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 FAM223AQ8IWN6 122 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 TTC9CQ8N5M4 171 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 MOB3AQ96BX8 217 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 MRPS26Q9BYN8 205 aaKnown RBP12.67□□□□□ -0.38
VSX1-207ENST00000557285 FXYD6Q9H0Q3 95 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 S4R3C0 116 aa12.67□□□□□ -0.38
VSX1-207ENST00000557285 BRI3O95415 125 aa12.66□□□□□ -0.38
VSX1-207ENST00000557285 HPRT1P00492 218 aa12.66□□□□□ -0.38
VSX1-207ENST00000557285 NQO2P16083 231 aa12.66□□□□□ -0.38
VSX1-207ENST00000557285 MAS1LP35410 378 aa12.66□□□□□ -0.38
VSX1-207ENST00000557285 TAS2R31P59538 309 aa12.66□□□□□ -0.38
VSX1-207ENST00000557285 KLF5Q13887 457 aaPredicted RBP12.66□□□□□ -0.38
VSX1-207ENST00000557285 DHRS11Q6UWP2 260 aa12.66□□□□□ -0.38
VSX1-207ENST00000557285 GPR141Q7Z602 305 aa12.66□□□□□ -0.38
VSX1-207ENST00000557285 NECAP1Q8NC96 275 aa12.66□□□□□ -0.38
VSX1-207ENST00000557285 OR9G4Q8NGQ1 327 aa12.66□□□□□ -0.38
VSX1-207ENST00000557285 OR6F1Q8NGZ6 308 aa12.66□□□□□ -0.38
VSX1-207ENST00000557285 GPX8Q8TED1 209 aa12.66□□□□□ -0.38
VSX1-207ENST00000557285 AIFM2Q9BRQ8 373 aa12.66□□□□□ -0.38
VSX1-207ENST00000557285 TMEM140Q9NV12 185 aa12.66□□□□□ -0.38
VSX1-207ENST00000557285 FBXL7Q9UJT9 491 aa12.66□□□□□ -0.38
VSX1-207ENST00000557285 ZNF257Q9Y2Q1 563 aa12.66□□□□□ -0.38
VSX1-207ENST00000557285 SMAD5-AS1Q9Y6J3 95 aa12.66□□□□□ -0.38
VSX1-207ENST00000557285 TRBV9A0A0B4J1U6 114 aa12.65□□□□□ -0.38
VSX1-207ENST00000557285 PPP5D1E7EU14 171 aa12.65□□□□□ -0.38
VSX1-207ENST00000557285 RBFOX2O43251 390 aaKnown RBP eCLIP12.65□□□□□ -0.38
VSX1-207ENST00000557285 PGLYRP1O75594 196 aaPredicted RBP12.65□□□□□ -0.38
VSX1-207ENST00000557285 ZNF735P0CB33 412 aa12.65□□□□□ -0.38
VSX1-207ENST00000557285 DEFA4P12838 97 aa12.65□□□□□ -0.38
VSX1-207ENST00000557285 ERVK-16P61578 105 aa12.65□□□□□ -0.38
VSX1-207ENST00000557285 OR4A5Q8NH83 315 aa12.65□□□□□ -0.38
VSX1-207ENST00000557285 AP3S1Q92572 193 aa12.65□□□□□ -0.38
VSX1-207ENST00000557285 BORCS5Q969J3 196 aa12.65□□□□□ -0.38
VSX1-207ENST00000557285 SLC2A9Q9NRM0 540 aa12.65□□□□□ -0.38
VSX1-207ENST00000557285 BET1LQ9NYM9 111 aa12.65□□□□□ -0.38
VSX1-207ENST00000557285 NPIPB5A8MRT5 1133 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms