RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 BSPH1Q075Z2 132 aa12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 FAM78BQ5VT40 261 aa12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 OR4P4Q8NGL7 312 aa12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 SAA2-SAA4A0A096LPE2 208 aa12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 IFNL4K9M1U5 179 aa12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 DVL1O14640 695 aa12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 TM4SF5O14894 197 aa12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 SAA2P0DJI9 122 aaPredicted RBP12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 NPY1RP25929 384 aa12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 J3QR06 171 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 MBP02144 154 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 COX7A1P24310 79 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 CHRNB4P30926 498 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 RTL8BQ17RB0 113 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 C16orf82Q7Z2V1 217 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 WFIKKN1Q96NZ8 548 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 PARLQ9H300 379 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 HSPB7Q9UBY9 170 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 MMP23AO75900 390 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 IGHV1-46P01743 117 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 OR10J4P0C629 311 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 CEACAM1P13688 526 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 GALR1P47211 349 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 RBMXL3Q8N7X1 1067 aaKnown RBP12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 NEUROG1Q92886 237 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 HARBI1Q96MB7 349 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 GPR61Q9BZJ8 451 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 PXMP4Q9Y6I8 212 aa12.71□□□□□ -0.37
TMEM55B-207ENST00000557041 PRB4P10163 310 aaPredicted RBP12.71□□□□□ -0.38
TMEM55B-207ENST00000557041 ATP5G3P48201 142 aa12.71□□□□□ -0.38
TMEM55B-207ENST00000557041 PFDN5Q99471 154 aa12.71□□□□□ -0.38
TMEM55B-207ENST00000557041 NAV3Q8IVL0 2385 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 APOA2P02652 100 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 REG1AP05451 166 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 ACAA1P09110 424 aaPredicted RBP12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 MGST1P10620 155 aaKnown RBP12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 ZNF295-AS1Q8N0V1 137 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 LINC01560Q8TB33 94 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 SCNM1Q9BWG6 230 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 MS4A5Q9H3V2 200 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 RELNP78509 3460 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 hADV38S2A0JD32 116 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 ZNF320A2RRD8 509 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 FAM157AC9JC47 383 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 TOX4O94842 621 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 PLAUP00749 431 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 CT45A1Q5HYN5 189 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 GFI1BQ5VTD9 330 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 MOB3BQ86TA1 216 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 CT45A3Q8NHU0 189 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 ABHD5Q8WTS1 349 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 NEIL1Q96FI4 390 aaPredicted RBP12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 TOLLIPQ9H0E2 274 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 NDUFB3O43676 98 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 MLANAQ16655 118 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 ATP6V1FQ16864 119 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 MALSU1Q96EH3 234 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 PCGF1Q9BSM1 259 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 RAB9BQ9NP90 201 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 MIOXQ9UGB7 285 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 JPT1Q9UK76 154 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 OR51B2Q9Y5P1 312 aa12.7□□□□□ -0.38
TMEM55B-207ENST00000557041 A8MXE2 369 aa12.69□□□□□ -0.38
TMEM55B-207ENST00000557041 HRASP01112 189 aa12.69□□□□□ -0.38
TMEM55B-207ENST00000557041 OR5G3P0C626 314 aa12.69□□□□□ -0.38
TMEM55B-207ENST00000557041 ARL14EPLP0DKL9 152 aa12.69□□□□□ -0.38
TMEM55B-207ENST00000557041 LHFPL4Q7Z7J7 247 aa12.69□□□□□ -0.38
TMEM55B-207ENST00000557041 TRBV23-1A0A0A0MS06 115 aa12.69□□□□□ -0.38
TMEM55B-207ENST00000557041 TRAV20A0A0B4J274 112 aa12.69□□□□□ -0.38
TMEM55B-207ENST00000557041 FAM90A26D6RGX4 464 aa12.69□□□□□ -0.38
TMEM55B-207ENST00000557041 RAB7AP51149 207 aa12.69□□□□□ -0.38
TMEM55B-207ENST00000557041 CASP6P55212 293 aa12.69□□□□□ -0.38
TMEM55B-207ENST00000557041 SPCS3P61009 180 aa12.69□□□□□ -0.38
TMEM55B-207ENST00000557041 OR4A47Q6IF82 309 aa12.69□□□□□ -0.38
TMEM55B-207ENST00000557041 TRAT1Q6PIZ9 186 aa12.69□□□□□ -0.38
TMEM55B-207ENST00000557041 SLC24A4Q8NFF2 622 aa12.69□□□□□ -0.38
TMEM55B-207ENST00000557041 LYPD6BQ8NI32 183 aa12.69□□□□□ -0.38
TMEM55B-207ENST00000557041 ELOVL1Q9BW60 279 aa12.69□□□□□ -0.38
TMEM55B-207ENST00000557041 GAR1Q9NY12 217 aaKnown RBP12.69□□□□□ -0.38
TMEM55B-207ENST00000557041 SSTP61278 116 aa12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 TMEM14EPQ6UXP3 125 aa12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 DOLPP1Q86YN1 238 aa12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 DERL1Q9BUN8 251 aa12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 MDFIC2A0A1B0GVS7 189 aa12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 MBD3L4A6NDZ8 208 aaPredicted RBP12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 MBD3L3A6NE82 208 aaPredicted RBP12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 MBD3L5A6NJ08 208 aaPredicted RBP12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 CA2P00918 260 aa12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 IGKV1-16P04430 117 aa12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 SLC35B1P78383 322 aa12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 ELOBQ15370 118 aa12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 MBNL2Q5VZF2 373 aaKnown RBP12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 MBD3L2Q8NHZ7 208 aaPredicted RBP12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 NAT8Q9UHE5 227 aa12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 KBTBD11-OT1A0A1B0GTJ5 212 aa12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 LMO1P25800 156 aa12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 SPNS3Q6ZMD2 512 aa12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 OR10W1Q8NGF6 305 aa12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 PSMG3Q9BT73 122 aaPredicted RBP12.68□□□□□ -0.38
TMEM55B-207ENST00000557041 CISD1Q9NZ45 108 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms