RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SLC10A1Q14973 349 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 TMEM241Q24JQ0 296 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 RSPO1Q2MKA7 263 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-246ENST00000557030 SNAI3Q3KNW1 292 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 KRTAP27-1Q3LI81 207 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 PIGYQ3MUY2 71 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 PLCXD3Q63HM9 321 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 NCR3LG1Q68D85 454 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 KCNIP4Q6PIL6 250 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 MOB1BQ7L9L4 216 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 MKXQ8IYA7 352 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 C20orf196Q8IYI0 205 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 GBGT1Q8N5D6 347 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 SUMF1Q8NBK3 374 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 OR10G3Q8NGC4 313 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 SAP25Q8TEE9 199 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 LSM10Q969L4 123 aaKnown RBP3.88□□□□□ -1.79
ATXN3-246ENST00000557030 SIGLEC12Q96PQ1 595 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 OR6C1Q96RD1 312 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 HIST1H2BLQ99880 126 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 SMIM7Q9BQ49 75 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 PYGO2Q9BRQ0 406 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 MAGT1Q9H0U3 335 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 AKIRIN1Q9H9L7 192 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-246ENST00000557030 SLC7A10Q9NS82 523 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 TMEM38BQ9NVV0 291 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 GNG13Q9P2W3 67 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 PILRBQ9UKJ0 227 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 RARRES3Q9UL19 164 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 RNF115Q9Y4L5 304 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 SPAG17Q6Q759 2223 aa3.88□□□□□ -1.79
ATXN3-246ENST00000557030 TNRC6BQ9UPQ9 1833 aaKnown RBP3.88□□□□□ -1.79
ATXN3-246ENST00000557030 ASH1LQ9NR48 2969 aaKnown RBP3.87□□□□□ -1.79
ATXN3-246ENST00000557030 ACACBO00763 2458 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 EXPH5Q8NEV8 1989 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 USP24Q9UPU5 2620 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 IGKV1-27A0A075B6S5 117 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 IGLV5-45A0A087WSX0 123 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 IGKV1-12A0A0C4DH73 117 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 MAP1LC3B2A6NCE7 125 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 SLC22A20A6NK97 555 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 ZFP92A6NM28 416 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 CD300LBA8K4G0 201 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 RNF212BA8MTL3 300 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 CEBPZOSA8MTT3 80 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 A8MWP6 167 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 TRAPPC2LH3BP13 241 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 H7BYZ3 331 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 M0QZK8 103 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 PHOX2AO14813 284 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 DEGS1O15121 323 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 TCAPO15273 167 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 SYNGR2O43760 224 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 GGCTO75223 188 aaKnown RBP3.87□□□□□ -1.79
ATXN3-246ENST00000557030 SCRG1O75711 98 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 KBTBD11O94819 623 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 NAPSAO96009 420 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 HRASP01112 189 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 IGKV1D-12P01611 117 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 IGHV4-39P01824 125 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 HLA-HP01893 362 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 PRSS1P07477 247 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 PFN1P07737 140 aaKnown RBP3.87□□□□□ -1.79
ATXN3-246ENST00000557030 F2RP25116 425 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 APLNRP35414 380 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 PSMB3P49720 205 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 ASCL1P50553 236 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 PAX9P55771 341 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 FGF12P61328 243 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 RPS18P62269 152 aaKnown RBP3.87□□□□□ -1.79
ATXN3-246ENST00000557030 LCN2P80188 198 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 RUNX1Q01196 453 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 USF2Q15853 346 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-246ENST00000557030 ATP6V1FQ16864 119 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 IQCJQ1A5X6 159 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 MRGPRG-AS1Q2M3A8 158 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 LRRC75BQ2VPJ9 315 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 HLA-BQ31612 363 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 BSXQ3C1V8 233 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 RIPPLY2Q5TAB7 128 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 RAET1LQ5VY80 246 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 LYSMD4Q5XG99 296 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 WDR25Q64LD2 544 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-246ENST00000557030 ZNF818PQ6ZRF7 136 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 P4HA3Q7Z4N8 544 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 CENPVQ7Z7K6 275 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-246ENST00000557030 GAPTQ8N292 157 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 ZNF611Q8N823 705 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 ZIC4Q8N9L1 334 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 PLPPR1Q8TBJ4 325 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 CA5BP1Q8WTZ4 195 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 JSRP1Q96MG2 331 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-246ENST00000557030 RASL10BQ96S79 203 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 STRADBQ9C0K7 418 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 MAP1LC3BQ9GZQ8 125 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 OR51I2Q9H344 312 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 WDR54Q9H977 334 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 CRLF2Q9HC73 371 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 SLC39A9Q9NUM3 307 aa3.87□□□□□ -1.79
ATXN3-246ENST00000557030 GAB2Q9UQC2 676 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms