RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 HNF4GQ14541 408 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 LY6EQ16553 131 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 DEFB112Q30KQ8 113 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 GPR157Q5UAW9 335 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 C11orf87Q6NUJ2 197 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 LPCAT3Q6P1A2 487 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 ZNF66Q6ZN08 573 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 Q6ZSN1 163 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 LYZL2Q7Z4W2 148 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 SGPP2Q8IWX5 399 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 CMTM1Q8IZ96 169 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 VKORC1L1Q8N0U8 176 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 CADM3Q8N126 398 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 C12orf45Q8N5I9 185 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-244ENST00000556898 CCDC71LQ8N9Z2 235 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 MINDY2Q8NBR6 621 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 ZBTB34Q8NCN2 500 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 ZNF431Q8TF32 576 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-244ENST00000556898 GLYATL2Q8WU03 294 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 FAM216AQ8WUB2 273 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 RPEQ96AT9 228 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 GPR146Q96CH1 333 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 ZNF503Q96F45 646 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 ZNF486Q96H40 463 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-244ENST00000556898 ZNF48Q96MX3 618 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-244ENST00000556898 SCGB3A2Q96PL1 93 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 S1PR3Q99500 378 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 OR51J1Q9H342 316 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 TNFRSF19Q9NS68 423 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 SLC35D1Q9NTN3 355 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 DPM3Q9P2X0 92 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 YLPM1P49750 1951 aaKnown RBP4.23□□□□□ -1.73
ATXN3-244ENST00000556898 TRAV3A0A0B4J244 114 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 SRRM4A7MD48 611 aaKnown RBP4.23□□□□□ -1.73
ATXN3-244ENST00000556898 H0Y980 276 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 SMLR1H3BR10 107 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 H7C2Y5 167 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 TRIM77I1YAP6 450 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 J3QLI3 93 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 GOSR2O14653 212 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 SSNA1O43805 119 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 CRYZL1O95825 349 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 IGKV1D-33P01593 117 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 IGKV1-33P01594 117 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 IGKV1-5P01602 117 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 SNRNP70P08621 437 aaKnown RBP4.23□□□□□ -1.73
ATXN3-244ENST00000556898 OR9G9P0C7N8 305 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 CXCL3P19876 107 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 GATA3P23771 443 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 UCP1P25874 307 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 G6PCP35575 357 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 CATR1Q13166 79 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 SCGB2A2Q13296 93 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 MSMO1Q15800 293 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 TMEM128Q5BJH2 165 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 MINOS1Q5TGZ0 78 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 TMEM268Q5VZI3 342 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 Q6ZRM9 215 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 SSX9Q7RTT3 188 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 SLC35G3Q8N808 338 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-244ENST00000556898 OR11H7Q8NGC8 314 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 PIFOQ8TCI5 191 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 ZNF418Q8TF45 676 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-244ENST00000556898 MITD1Q8WV92 249 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 TAF15Q92804 592 aaKnown RBP eCLIP4.23□□□□□ -1.73
ATXN3-244ENST00000556898 GALNT14Q96FL9 552 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 OR10C1Q96KK4 312 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 HSD17B10Q99714 261 aaKnown RBP4.23□□□□□ -1.73
ATXN3-244ENST00000556898 CHIAQ9BZP6 476 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 TMEM222Q9H0R3 208 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 ALX4Q9H161 411 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-244ENST00000556898 MGAT4CQ9UBM8 478 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 NUP50Q9UKX7 468 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 NSG2Q9Y328 171 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 TBL2Q9Y4P3 447 aaKnown RBP4.23□□□□□ -1.73
ATXN3-244ENST00000556898 AMMECR1Q9Y4X0 333 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-244ENST00000556898 MINOS1-NBL1R4GNA1 71 aa4.23□□□□□ -1.73
ATXN3-244ENST00000556898 SNRPGP15A8MWD9 76 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 FAM25EA8MYX2 175 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 CREBL2O60519 120 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-244ENST00000556898 PRAF2O60831 178 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 SLC22A5O76082 557 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 DUS4LO95620 317 aaKnown RBP4.22□□□□□ -1.73
ATXN3-244ENST00000556898 CDS2O95674 445 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 KRASP01116 189 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 IGLV2-23P01705 113 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 SULT1A3P0DMM9 295 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 SULT1A4P0DMN0 295 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 BCAP31P51572 246 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 F2RL1P55085 397 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 RAG2P55895 527 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 OR2B8PP59922 312 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 RPS16P62249 146 aaKnown RBP4.22□□□□□ -1.73
ATXN3-244ENST00000556898 HES1Q14469 280 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 MRGPRG-AS1Q2M3A8 158 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 MIDNQ504T8 468 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 GGNBP1Q5YKI7 109 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 FAM71F2Q6NXP2 309 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 TMEM219Q86XT9 240 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms