RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 TESCQ96BS2 214 aa0.72□□□□□ -2.29
LINC00871-203ENST00000556869 GNPNAT1Q96EK6 184 aaPredicted RBP0.72□□□□□ -2.29
LINC00871-203ENST00000556869 ATP6V1G3Q96LB4 118 aa0.72□□□□□ -2.29
LINC00871-203ENST00000556869 ERMAPQ96PL5 475 aaPredicted RBP0.72□□□□□ -2.29
LINC00871-203ENST00000556869 CCL13Q99616 98 aa0.72□□□□□ -2.29
LINC00871-203ENST00000556869 ADAT1Q9BUB4 502 aaKnown RBP0.72□□□□□ -2.29
LINC00871-203ENST00000556869 SPACA1Q9HBV2 294 aa0.72□□□□□ -2.29
LINC00871-203ENST00000556869 SPANXB1Q9NS25 103 aaPredicted RBP0.72□□□□□ -2.29
LINC00871-203ENST00000556869 THSD7AQ9UPZ6 1657 aa0.72□□□□□ -2.29
LINC00871-203ENST00000556869 FLT4P35916 1363 aa0.71□□□□□ -2.3
LINC00871-203ENST00000556869 IGKV2D-26A0A0A0MRZ7 120 aa0.71□□□□□ -2.3
LINC00871-203ENST00000556869 FAM25EA8MYX2 175 aa0.71□□□□□ -2.3
LINC00871-203ENST00000556869 CALUO43852 315 aaPredicted RBP0.71□□□□□ -2.3
LINC00871-203ENST00000556869 OCMP0CE72 109 aaPredicted RBP0.71□□□□□ -2.3
LINC00871-203ENST00000556869 REG1BP48304 166 aa0.71□□□□□ -2.3
LINC00871-203ENST00000556869 CDC34P49427 236 aaPredicted RBP0.71□□□□□ -2.3
LINC00871-203ENST00000556869 RAB13P51153 203 aa0.71□□□□□ -2.3
LINC00871-203ENST00000556869 CXCR4P61073 352 aa0.71□□□□□ -2.3
LINC00871-203ENST00000556869 PPP1R1AQ13522 171 aa0.71□□□□□ -2.3
LINC00871-203ENST00000556869 Q1T7F1 81 aa0.71□□□□□ -2.3
LINC00871-203ENST00000556869 SBSNQ6UWP8 590 aa0.71□□□□□ -2.3
LINC00871-203ENST00000556869 RPP25LQ8N5L8 163 aaKnown RBP0.71□□□□□ -2.3
LINC00871-203ENST00000556869 C15orf53Q8NAA6 179 aa0.71□□□□□ -2.3
LINC00871-203ENST00000556869 EEF1AKMT1Q8WVE0 214 aa0.71□□□□□ -2.3
LINC00871-203ENST00000556869 DHRS9Q9BPW9 319 aa0.71□□□□□ -2.3
LINC00871-203ENST00000556869 UPF3BQ9BZI7 483 aaKnown RBP0.71□□□□□ -2.3
LINC00871-203ENST00000556869 GPR84Q9NQS5 396 aa0.71□□□□□ -2.3
LINC00871-203ENST00000556869 FKBP14Q9NWM8 211 aa0.71□□□□□ -2.3
LINC00871-203ENST00000556869 PRELID1Q9Y255 219 aa0.71□□□□□ -2.3
LINC00871-203ENST00000556869 WDR90Q96KV7 1748 aa0.71□□□□□ -2.3
LINC00871-203ENST00000556869 DICER1Q9UPY3 1922 aaKnown RBP0.71□□□□□ -2.3
LINC00871-203ENST00000556869 SIPA1L1O43166 1804 aa0.71□□□□□ -2.3
LINC00871-203ENST00000556869 ABCC12Q96J65 1359 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 SYNRGQ9UMZ2 1314 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 HEATR5BQ9P2D3 2071 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 A0A1B0GW54 56 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 MEIS3P1A6NDR6 274 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 I3L521 148 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 BIRC5O15392 142 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 MRPS14O60783 128 aaKnown RBP0.7□□□□□ -2.3
LINC00871-203ENST00000556869 APOMO95445 188 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 HIST1H1CP16403 213 aaKnown RBP0.7□□□□□ -2.3
LINC00871-203ENST00000556869 DDTP30046 118 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 S100A7P31151 101 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 CSN1S1P47710 185 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 UBE2G2P60604 165 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 SKP1P63208 163 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 PLCXD2Q0VAA5 305 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 FAM78BQ5VT40 261 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 CST9Q5W186 159 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 FAM19A5Q7Z5A7 132 aaPredicted RBP0.7□□□□□ -2.3
LINC00871-203ENST00000556869 OR7G1Q8NGA0 311 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 HAVCR2Q8TDQ0 301 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 SMIM19Q96E16 107 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 KCTD7Q96MP8 289 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 CHST6Q9GZX3 395 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 WDR54Q9H977 334 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 MED9Q9NWA0 146 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 EURLQ9NYK6 297 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 DKKL1Q9UK85 242 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 C15orf41Q9Y2V0 281 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 TIMM22Q9Y584 194 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 MICAL3Q7RTP6 2002 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 PTPRSQ13332 1948 aa0.7□□□□□ -2.3
LINC00871-203ENST00000556869 CPAMD8Q8IZJ3 1885 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 TRAPPC13A5PLN9 417 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 F5H768 121 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 PFDN6O15212 129 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 LEPROTO15243 131 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 PLA2G10O15496 165 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 SSNA1O43805 119 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 NSA2O95478 260 aaKnown RBP0.69□□□□□ -2.3
LINC00871-203ENST00000556869 REG1AP05451 166 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 IL3P08700 152 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 ACSM3Q53FZ2 586 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 TNFAIP8L2Q6P589 184 aaPredicted RBP0.69□□□□□ -2.3
LINC00871-203ENST00000556869 SSX8Q7RTT4 187 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 UMODL1-AS1Q8N2C9 162 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 TMEM251Q8N6I4 163 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 OR8B3Q8NGG8 313 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 ANAPC10Q9UM13 185 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 POLR1DQ9Y2S0 133 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 COQ4Q9Y3A0 265 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 GREB1Q4ZG55 1949 aa0.69□□□□□ -2.3
LINC00871-203ENST00000556869 DLG5Q8TDM6 1919 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 GGT3PA6NGU5 568 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 GOLGA8KD6RF30 607 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 GOLGA8MH3BSY2 632 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 SDCBPO00560 298 aaPredicted RBP0.68□□□□□ -2.3
LINC00871-203ENST00000556869 SLC22A1O15245 554 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 TYMSP04818 313 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 MSMBP08118 114 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 HLA-DMBP28068 263 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 EIF2B2P49770 351 aaKnown RBP0.68□□□□□ -2.3
LINC00871-203ENST00000556869 OR4D2P58180 307 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 FABP9Q0Z7S8 132 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 RSU1Q15404 277 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 C1orf194Q5T5A4 169 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 FAM27BQ5VT28 67 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 C5orf46Q6UWT4 87 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms