RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 H7BYZ3 331 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 CCL21O00585 134 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 SYNGR1O43759 233 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 SMPD2O60906 423 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 WDR1O75083 606 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 KBTBD11O94819 623 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 IGHV3-9P01782 118 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 EGR2P11161 476 aaPredicted RBP5.09□□□□□ -1.59
CPSF2-205ENST00000556622 NQO2P16083 231 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 PPP1CCP36873 323 aaKnown RBP5.09□□□□□ -1.59
CPSF2-205ENST00000556622 CFHR2P36980 270 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 PAX9P55771 341 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 SPCS3P61009 180 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 SRSF1Q07955 248 aaKnown RBP eCLIP5.09□□□□□ -1.59
CPSF2-205ENST00000556622 HERPUD1Q15011 391 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 BSXQ3C1V8 233 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 PDLIM3Q53GG5 364 aaPredicted RBP5.09□□□□□ -1.59
CPSF2-205ENST00000556622 DMRTC1Q5HYR2 192 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 OR2T2Q6IF00 324 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 RTN4RL2Q86UN3 420 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 MDP1Q86V88 176 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 ZFP82Q8N141 532 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 ZNF525Q8N782 197 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 CYB561D1Q8N8Q1 229 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 OR10G9Q8NGN4 311 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 OR10G7Q8NGN6 311 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 OR4A16Q8NH70 328 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 FGFBP3Q8TAT2 258 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 DTD1Q8TEA8 209 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 TMEM171Q8WVE6 324 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 RPUSD4Q96CM3 377 aaKnown RBP5.09□□□□□ -1.59
CPSF2-205ENST00000556622 WDYHV1Q96HA8 205 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 UHRF2Q96PU4 802 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 RARRES2Q99969 163 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 SMIM7Q9BQ49 75 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 C20orf24Q9BUV8 137 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 SFXN3Q9BWM7 321 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 PARP12Q9H0J9 701 aaKnown RBP5.09□□□□□ -1.59
CPSF2-205ENST00000556622 ESRP2Q9H6T0 727 aaKnown RBP5.09□□□□□ -1.59
CPSF2-205ENST00000556622 ZDHHC11Q9H8X9 412 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 HES4Q9HCC6 221 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 RPRMQ9NS64 109 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 ZMAT5Q9UDW3 170 aaKnown RBP5.09□□□□□ -1.59
CPSF2-205ENST00000556622 SH3BGRL2Q9UJC5 107 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 JPT1Q9UK76 154 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 ZDHHC8Q9ULC8 765 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 ARL2-SNX15V9GYD0 113 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 DNAJC13O75165 2243 aa5.09□□□□□ -1.59
CPSF2-205ENST00000556622 HIVEP3Q5T1R4 2406 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 PCNX1Q96RV3 2341 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 IGKV1D-13A0A0B4J2D9 117 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 IGKV1-6A0A0C4DH72 117 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 A0A0G2JMM0 328 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 A0A1W2PPB8 328 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 A0A1W2PPE2 198 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 A0A1W2PRS3 328 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 OR5H1A6NKK0 313 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 ZNF729A6NN14 1252 aaPredicted RBP5.08□□□□□ -1.6
CPSF2-205ENST00000556622 KIR3DP1A8MWS1 328 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 HSPB6O14558 160 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 DVL1O14640 695 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 MGST3O14880 152 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 ZNHIT1O43257 154 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 TNFSF12O43508 249 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 TIMM8AO60220 97 aaPredicted RBP5.08□□□□□ -1.6
CPSF2-205ENST00000556622 YPEL1O60688 119 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 CLN5O75503 358 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 HRASP01112 189 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 GCGP01275 180 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 IGHG3P01860 377 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 ARG1P05089 322 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 FBP1P09467 338 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 IGKV1-13P0DP09 117 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 TNFSF4P23510 183 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 GPR12P47775 334 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 GABRA2P47869 451 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 FHITP49789 147 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 ASCL1P50553 236 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 TDGF1P3P51864 188 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 NDUFA6P56556 154 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 DEFA6Q01524 100 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 COL10A1Q03692 680 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 HNF4GQ14541 408 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 VWC2Q2TAL6 325 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 SP5Q6BEB4 398 aaPredicted RBP5.08□□□□□ -1.6
CPSF2-205ENST00000556622 DRAM1Q8N682 238 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 PLPPR1Q8TBJ4 325 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 LINC00476Q8WZB0 136 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 DYRK2Q92630 601 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 ISOC2Q96AB3 205 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 TMEM18Q96B42 140 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 SNX22Q96L94 193 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 YPEL2Q96QA6 119 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 RNF2Q99496 336 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 S1PR3Q99500 378 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 OR2J1Q9GZK6 312 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 JKAMPQ9P055 326 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 LY96Q9Y6Y9 160 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 ZNF407Q9C0G0 2248 aa5.08□□□□□ -1.6
CPSF2-205ENST00000556622 NCOA6Q14686 2063 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms