RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 OR4A47Q6IF82 309 aa14.54□□□□□ -0.08
PTPN21-208ENST00000556564 H1FOOQ8IZA3 346 aaPredicted RBP14.54□□□□□ -0.08
PTPN21-208ENST00000556564 SAA2-SAA4A0A096LPE2 208 aa14.54□□□□□ -0.08
PTPN21-208ENST00000556564 HSBP1O75506 76 aa14.54□□□□□ -0.08
PTPN21-208ENST00000556564 CA2P00918 260 aa14.54□□□□□ -0.08
PTPN21-208ENST00000556564 SAA2P0DJI9 122 aaPredicted RBP14.54□□□□□ -0.08
PTPN21-208ENST00000556564 C9orf62Q8N4C0 152 aa14.54□□□□□ -0.08
PTPN21-208ENST00000556564 TUBA4BQ9H853 241 aa14.54□□□□□ -0.08
PTPN21-208ENST00000556564 COMPP49747 757 aaPredicted RBP14.54□□□□□ -0.08
PTPN21-208ENST00000556564 SELENOTP62341 195 aa14.54□□□□□ -0.08
PTPN21-208ENST00000556564 IFITM3Q01628 133 aa14.54□□□□□ -0.08
PTPN21-208ENST00000556564 ZNF362Q5T0B9 420 aaPredicted RBP14.54□□□□□ -0.08
PTPN21-208ENST00000556564 OR10G8Q8NGN5 311 aa14.54□□□□□ -0.08
PTPN21-208ENST00000556564 TMEM133Q9H2Q1 129 aa14.54□□□□□ -0.08
PTPN21-208ENST00000556564 TCAPO15273 167 aa14.54□□□□□ -0.08
PTPN21-208ENST00000556564 EIF3GO75821 320 aaKnown RBP eCLIP14.54□□□□□ -0.08
PTPN21-208ENST00000556564 SPANXN1Q5VSR9 72 aa14.54□□□□□ -0.08
PTPN21-208ENST00000556564 IGKV1-9A0A0C4DH69 117 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 UCP3P55916 312 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 BSXQ3C1V8 233 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 BPIFA4PQ86YQ2 179 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 RAX2Q96IS3 184 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 SRD5A3Q9H8P0 318 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 VMO1Q7Z5L0 202 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 CLDN34H7C241 214 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 TGOLN2O43493 480 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 LY6HO94772 140 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 RNF224P0DH78 156 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 HKR1P10072 659 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 HIST1H1BP16401 226 aaKnown RBP14.53□□□□□ -0.08
PTPN21-208ENST00000556564 IL22RA2Q969J5 263 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 JMJD8Q96S16 334 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 RGS13O14921 159 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 IL4P05112 153 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 CLEC19AQ6UXS0 136 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.53□□□□□ -0.08
PTPN21-208ENST00000556564 EP300Q09472 2414 aaPredicted RBP14.53□□□□□ -0.08
PTPN21-208ENST00000556564 CYB5R2Q6BCY4 276 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 ELOVL1Q9BW60 279 aa14.53□□□□□ -0.08
PTPN21-208ENST00000556564 LYRM2Q9NU23 88 aaPredicted RBP14.53□□□□□ -0.08
PTPN21-208ENST00000556564 OR2T8A6NH00 312 aa14.52□□□□□ -0.08
PTPN21-208ENST00000556564 ZP3P21754 424 aa14.52□□□□□ -0.08
PTPN21-208ENST00000556564 NSUN5P1Q3KNT7 163 aa14.52□□□□□ -0.08
PTPN21-208ENST00000556564 NHLRC2Q8NBF2 726 aa14.52□□□□□ -0.08
PTPN21-208ENST00000556564 OSR1Q8TAX0 266 aaPredicted RBP14.52□□□□□ -0.08
PTPN21-208ENST00000556564 NPFFR1Q9GZQ6 430 aa14.52□□□□□ -0.08
PTPN21-208ENST00000556564 FOXA2Q9Y261 457 aaPredicted RBP14.52□□□□□ -0.08
PTPN21-208ENST00000556564 CD74P04233 296 aa14.52□□□□□ -0.09
PTPN21-208ENST00000556564 KLRD1Q13241 179 aa14.52□□□□□ -0.09
PTPN21-208ENST00000556564 SDK2Q58EX2 2172 aa14.52□□□□□ -0.09
PTPN21-208ENST00000556564 PGPA6NDG6 321 aa14.52□□□□□ -0.09
PTPN21-208ENST00000556564 J3QKU1 62 aa14.52□□□□□ -0.09
PTPN21-208ENST00000556564 MRPL54Q6P161 138 aaKnown RBP14.52□□□□□ -0.09
PTPN21-208ENST00000556564 DDB2Q92466 427 aa14.52□□□□□ -0.09
PTPN21-208ENST00000556564 IGHV3OR16-8A0A075B7F1 116 aa14.52□□□□□ -0.09
PTPN21-208ENST00000556564 FAM90A26D6RGX4 464 aa14.52□□□□□ -0.09
PTPN21-208ENST00000556564 HIST1H3AP68431 136 aa14.51□□□□□ -0.09
PTPN21-208ENST00000556564 RIGQ13278 110 aa14.51□□□□□ -0.09
PTPN21-208ENST00000556564 TAF15Q92804 592 aaKnown RBP eCLIP14.51□□□□□ -0.09
PTPN21-208ENST00000556564 NPDC1Q9NQX5 325 aaPredicted RBP14.51□□□□□ -0.09
PTPN21-208ENST00000556564 CCL1P22362 96 aa14.51□□□□□ -0.09
PTPN21-208ENST00000556564 GPR183P32249 361 aa14.51□□□□□ -0.09
PTPN21-208ENST00000556564 DNAJC4Q9NNZ3 241 aa14.51□□□□□ -0.09
PTPN21-208ENST00000556564 TRAV24A0A0B4J272 114 aa14.51□□□□□ -0.09
PTPN21-208ENST00000556564 MPDU1O75352 247 aa14.51□□□□□ -0.09
PTPN21-208ENST00000556564 NCMAPQ5T1S8 102 aa14.51□□□□□ -0.09
PTPN21-208ENST00000556564 ZNF497Q6ZNH5 498 aa14.51□□□□□ -0.09
PTPN21-208ENST00000556564 TWIST1Q15672 202 aa14.51□□□□□ -0.09
PTPN21-208ENST00000556564 HEATR5BQ9P2D3 2071 aa14.51□□□□□ -0.09
PTPN21-208ENST00000556564 SELLP14151 372 aa14.51□□□□□ -0.09
PTPN21-208ENST00000556564 MFSD2BA6NFX1 497 aa14.5□□□□□ -0.09
PTPN21-208ENST00000556564 MDC1Q14676 2089 aaKnown RBP14.5□□□□□ -0.09
PTPN21-208ENST00000556564 APC2O95996 2303 aa14.5□□□□□ -0.09
PTPN21-208ENST00000556564 SEC11BP0C7V7 166 aa14.5□□□□□ -0.09
PTPN21-208ENST00000556564 DPPA3Q6W0C5 159 aa14.5□□□□□ -0.09
PTPN21-208ENST00000556564 PRSS22Q9GZN4 317 aa14.5□□□□□ -0.09
PTPN21-208ENST00000556564 F12P00748 615 aaPredicted RBP14.5□□□□□ -0.09
PTPN21-208ENST00000556564 DTX1Q86Y01 620 aa14.5□□□□□ -0.09
PTPN21-208ENST00000556564 PLXNA2O75051 1894 aa14.5□□□□□ -0.09
PTPN21-208ENST00000556564 PSG9Q00887 426 aa14.5□□□□□ -0.09
PTPN21-208ENST00000556564 FAM166AQ6J272 317 aa14.5□□□□□ -0.09
PTPN21-208ENST00000556564 FAM24BQ8N5W8 94 aa14.5□□□□□ -0.09
PTPN21-208ENST00000556564 MSGN1A6NI15 193 aa14.49□□□□□ -0.09
PTPN21-208ENST00000556564 TMEM178BH3BS89 294 aa14.49□□□□□ -0.09
PTPN21-208ENST00000556564 NBR2O15453 112 aa14.49□□□□□ -0.09
PTPN21-208ENST00000556564 DLK1P80370 383 aa14.49□□□□□ -0.09
PTPN21-208ENST00000556564 SNRPD3P62318 126 aaKnown RBP14.49□□□□□ -0.09
PTPN21-208ENST00000556564 TUSC1Q2TAM9 212 aa14.49□□□□□ -0.09
PTPN21-208ENST00000556564 TMEM189A5PLL7 270 aa14.49□□□□□ -0.09
PTPN21-208ENST00000556564 AMY1AP04745 511 aa14.49□□□□□ -0.09
PTPN21-208ENST00000556564 ZNF525Q8N782 197 aa14.49□□□□□ -0.09
PTPN21-208ENST00000556564 A0A0G2JLM5 398 aa14.49□□□□□ -0.09
PTPN21-208ENST00000556564 CXCL2P19875 107 aa14.49□□□□□ -0.09
PTPN21-208ENST00000556564 ZNF345Q14585 488 aa14.49□□□□□ -0.09
PTPN21-208ENST00000556564 LILRA1O75019 489 aa14.49□□□□□ -0.09
PTPN21-208ENST00000556564 SERF2P84101 59 aa14.49□□□□□ -0.09
PTPN21-208ENST00000556564 MORN2Q502X0 79 aa14.49□□□□□ -0.09
PTPN21-208ENST00000556564 OR2D3Q8NGH3 330 aa14.48□□□□□ -0.09
PTPN21-208ENST00000556564 CHAC2Q8WUX2 184 aa14.48□□□□□ -0.09
PTPN21-208ENST00000556564 C7orf66A4D0T2 115 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms