RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CD300LFQ8TDQ1 290 aa10.25□□□□□ -0.77
ACTN1-219ENST00000556432 CSTL1Q9H114 145 aa10.25□□□□□ -0.77
ACTN1-219ENST00000556432 APLNQ9ULZ1 77 aa10.25□□□□□ -0.77
ACTN1-219ENST00000556432 TRBV7-1A0A0A6YYK4 115 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 MFSD2BA6NFX1 497 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 REG1AP05451 166 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 AREGP15514 252 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 HIST1H1BP16401 226 aaKnown RBP10.24□□□□□ -0.77
ACTN1-219ENST00000556432 QRFPP83859 136 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 PLET1Q6UQ28 207 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 LRRTM1Q86UE6 522 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 APRG1Q8IVJ8 170 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 ZNF485Q8NCK3 441 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 SETD9Q8NE22 299 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 OR4A5Q8NH83 315 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 CXorf58Q96LI9 332 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 FANCD2OSQ96PS1 177 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 C9orf16Q9BUW7 83 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 PECRQ9BY49 303 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 KRTAP4-5Q9BYR2 181 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 SLC2A9Q9NRM0 540 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 PLA2G2EQ9NZK7 142 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 HSF4Q9ULV5 492 aa10.24□□□□□ -0.77
ACTN1-219ENST00000556432 MYL12BO14950 172 aa10.23□□□□□ -0.77
ACTN1-219ENST00000556432 IL6RP08887 468 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-219ENST00000556432 RPA2P15927 270 aa10.23□□□□□ -0.77
ACTN1-219ENST00000556432 PSMB6P28072 239 aa10.23□□□□□ -0.77
ACTN1-219ENST00000556432 PSMD7P51665 324 aa10.23□□□□□ -0.77
ACTN1-219ENST00000556432 ELLP55199 621 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-219ENST00000556432 ACSM3Q53FZ2 586 aa10.23□□□□□ -0.77
ACTN1-219ENST00000556432 PHYHIPQ92561 330 aa10.23□□□□□ -0.77
ACTN1-219ENST00000556432 CABLES2Q9BTV7 478 aa10.23□□□□□ -0.77
ACTN1-219ENST00000556432 OR51E2Q9H255 320 aa10.23□□□□□ -0.77
ACTN1-219ENST00000556432 PLGRKTQ9HBL7 147 aa10.23□□□□□ -0.77
ACTN1-219ENST00000556432 MRPS7Q9Y2R9 242 aaKnown RBP10.23□□□□□ -0.77
ACTN1-219ENST00000556432 PRELID3BQ9Y3B1 194 aa10.23□□□□□ -0.77
ACTN1-219ENST00000556432 TRBV6-7A0A0A0MS04 114 aa10.22□□□□□ -0.77
ACTN1-219ENST00000556432 J3QRK9 145 aa10.22□□□□□ -0.77
ACTN1-219ENST00000556432 CRHBPP24387 322 aa10.22□□□□□ -0.77
ACTN1-219ENST00000556432 TMEM50BP56557 158 aa10.22□□□□□ -0.77
ACTN1-219ENST00000556432 ST3GAL4Q11206 333 aa10.22□□□□□ -0.77
ACTN1-219ENST00000556432 KCTD9Q7L273 389 aa10.22□□□□□ -0.77
ACTN1-219ENST00000556432 C10orf67Q8IYJ2 551 aa10.22□□□□□ -0.77
ACTN1-219ENST00000556432 FAM89BQ8N5H3 189 aa10.22□□□□□ -0.77
ACTN1-219ENST00000556432 VSTM2AQ8TAG5 236 aa10.22□□□□□ -0.77
ACTN1-219ENST00000556432 MAFIPQ8WZ33 124 aa10.22□□□□□ -0.77
ACTN1-219ENST00000556432 DAZ1Q9NQZ3 744 aaKnown RBP10.22□□□□□ -0.77
ACTN1-219ENST00000556432 DNAH6Q9C0G6 4158 aa10.21□□□□□ -0.77
ACTN1-219ENST00000556432 EFCAB10A6NFE3 127 aa10.21□□□□□ -0.77
ACTN1-219ENST00000556432 C11orf94C9JXX5 98 aa10.21□□□□□ -0.77
ACTN1-219ENST00000556432 E7EUB6 86 aa10.21□□□□□ -0.77
ACTN1-219ENST00000556432 M0R2N4 97 aa10.21□□□□□ -0.77
ACTN1-219ENST00000556432 RAB27BO00194 218 aa10.21□□□□□ -0.77
ACTN1-219ENST00000556432 KBTBD11O94819 623 aa10.21□□□□□ -0.77
ACTN1-219ENST00000556432 CD1AP06126 327 aa10.21□□□□□ -0.77
ACTN1-219ENST00000556432 FCGR3AP08637 254 aa10.21□□□□□ -0.77
ACTN1-219ENST00000556432 ZNF735P0CB33 412 aa10.21□□□□□ -0.77
ACTN1-219ENST00000556432 HSD17B12Q53GQ0 312 aa10.21□□□□□ -0.77
ACTN1-219ENST00000556432 NR2C2APQ86WQ0 139 aa10.21□□□□□ -0.77
ACTN1-219ENST00000556432 CENPSQ8N2Z9 138 aa10.21□□□□□ -0.77
ACTN1-219ENST00000556432 OR56B1Q8NGI3 324 aa10.21□□□□□ -0.77
ACTN1-219ENST00000556432 TMEM190Q8WZ59 177 aa10.21□□□□□ -0.77
ACTN1-219ENST00000556432 OR2A7Q96R45 310 aa10.21□□□□□ -0.77
ACTN1-219ENST00000556432 C20orf24Q9BUV8 137 aa10.21□□□□□ -0.77
ACTN1-219ENST00000556432 A0A1B0GW64 132 aa10.2□□□□□ -0.78
ACTN1-219ENST00000556432 FOXI3A8MTJ6 420 aaPredicted RBP10.2□□□□□ -0.78
ACTN1-219ENST00000556432 CA1P00915 261 aaPredicted RBP10.2□□□□□ -0.78
ACTN1-219ENST00000556432 CRYGCP07315 174 aa10.2□□□□□ -0.78
ACTN1-219ENST00000556432 CTSDP07339 412 aaPredicted RBP10.2□□□□□ -0.78
ACTN1-219ENST00000556432 TFPI2P48307 235 aa10.2□□□□□ -0.78
ACTN1-219ENST00000556432 WNT4P56705 351 aa10.2□□□□□ -0.78
ACTN1-219ENST00000556432 ARFRP1Q13795 201 aa10.2□□□□□ -0.78
ACTN1-219ENST00000556432 RAB11BQ15907 218 aa10.2□□□□□ -0.78
ACTN1-219ENST00000556432 ZNF124Q15973 351 aa10.2□□□□□ -0.78
ACTN1-219ENST00000556432 SSX9Q7RTT3 188 aa10.2□□□□□ -0.78
ACTN1-219ENST00000556432 ZNF502Q8TBZ5 544 aa10.2□□□□□ -0.78
ACTN1-219ENST00000556432 IGLV11-55A0A075B6I3 123 aa10.19□□□□□ -0.78
ACTN1-219ENST00000556432 IGHV4-4A0A075B6R2 117 aa10.19□□□□□ -0.78
ACTN1-219ENST00000556432 IGHV3OR16-8A0A075B7F1 116 aa10.19□□□□□ -0.78
ACTN1-219ENST00000556432 OR2T8A6NH00 312 aa10.19□□□□□ -0.78
ACTN1-219ENST00000556432 TGOLN2O43493 480 aa10.19□□□□□ -0.78
ACTN1-219ENST00000556432 ZNF207O43670 478 aaKnown RBP10.19□□□□□ -0.78
ACTN1-219ENST00000556432 ADMP35318 185 aa10.19□□□□□ -0.78
ACTN1-219ENST00000556432 MAS1LP35410 378 aa10.19□□□□□ -0.78
ACTN1-219ENST00000556432 TMEM187Q14656 261 aa10.19□□□□□ -0.78
ACTN1-219ENST00000556432 PLAC9Q5JTB6 97 aa10.19□□□□□ -0.78
ACTN1-219ENST00000556432 OR4S2Q8NH73 311 aa10.19□□□□□ -0.78
ACTN1-219ENST00000556432 ZNF436Q9C0F3 470 aaPredicted RBP10.19□□□□□ -0.78
ACTN1-219ENST00000556432 IGKV3-7A0A075B6H7 116 aa10.18□□□□□ -0.78
ACTN1-219ENST00000556432 A0A075B6Q4 140 aa10.18□□□□□ -0.78
ACTN1-219ENST00000556432 RTL8CO15255 209 aa10.18□□□□□ -0.78
ACTN1-219ENST00000556432 DIRAS3O95661 229 aa10.18□□□□□ -0.78
ACTN1-219ENST00000556432 CD36P16671 472 aa10.18□□□□□ -0.78
ACTN1-219ENST00000556432 CLDN12P56749 244 aa10.18□□□□□ -0.78
ACTN1-219ENST00000556432 RPL8P62917 257 aaKnown RBP10.18□□□□□ -0.78
ACTN1-219ENST00000556432 ZNF575Q86XF7 245 aa10.18□□□□□ -0.78
ACTN1-219ENST00000556432 H1FOOQ8IZA3 346 aaPredicted RBP10.18□□□□□ -0.78
ACTN1-219ENST00000556432 MS4A15Q8N5U1 240 aa10.18□□□□□ -0.78
ACTN1-219ENST00000556432 ZNF645Q8N7E2 425 aa10.18□□□□□ -0.78
ACTN1-219ENST00000556432 TMEM167AQ8TBQ9 72 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms