RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 TPI1P60174 286 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 TPM4P67936 248 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 SLC38A11Q08AI6 406 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 C1orf195Q5TG92 126 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 SFXN4Q6P4A7 337 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 COMMD7Q86VX2 200 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 OTUD6BQ8N6M0 293 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 GPR32P1Q8NGA4 272 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 RAB8BQ92930 207 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 DRC3Q9H069 523 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 XAGE1AQ9HD64 81 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 GPR84Q9NQS5 396 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 USE1Q9NZ43 259 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 DOK5Q9P104 306 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 AK3Q9UIJ7 227 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 GPR98Q8WXG9 6306 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 TRGV2A0A075B6R0 118 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 IGHV1-69-2A0A0G2JMI3 117 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 EVPLLA8MZ36 301 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 LRRN3E7EW58 273 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 KLRC4O43908 158 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 ZNF737O75373 536 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 NSA2O95478 260 aaKnown RBP0.86□□□□□ -2.27
SCFD1-218ENST00000556256 APOEP02649 317 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 TFPTP0C1Z6 253 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 PSMB8P28062 276 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 RPL28P46779 137 aaKnown RBP0.86□□□□□ -2.27
SCFD1-218ENST00000556256 TMEM258P61165 79 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 POLR2GP62487 172 aaKnown RBP eCLIP0.86□□□□□ -2.27
SCFD1-218ENST00000556256 EMX1Q04741 257 aaPredicted RBP0.86□□□□□ -2.27
SCFD1-218ENST00000556256 AKR1C1Q04828 323 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 COTL1Q14019 142 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 RSU1Q15404 277 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 CDKL4Q5MAI5 379 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 CLVS2Q5SYC1 327 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 TMEM42Q69YG0 159 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 CD200R1LQ6Q8B3 271 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 C5orf46Q6UWT4 87 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 SSX8Q7RTT4 187 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 DEFB125Q8N687 156 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 DEFB119Q8N690 84 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 OR8B12Q8NGG6 310 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 SLC7A6Q92536 515 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 HSPB9Q9BQS6 159 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 CXorf21Q9HAI6 301 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 NKIRAS1Q9NYS0 192 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 PXMP4Q9Y6I8 212 aa0.86□□□□□ -2.27
SCFD1-218ENST00000556256 TMEM269A0A1B0GVZ9 245 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 H3BT86 120 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 H7C2G1 150 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 CIAO1O76071 339 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 SERPINA7P05543 415 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 DEFA4P12838 97 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 CR1P17927 2039 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 MYL12AP19105 171 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 RPS12P25398 132 aaKnown RBP0.85□□□□□ -2.27
SCFD1-218ENST00000556256 MAP2K4P45985 399 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 MARCKSL1P49006 195 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 EMP1P54849 157 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 RAB14P61106 215 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 NAA20P61599 178 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 AP1S1P61966 158 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 RPL30P62888 115 aaKnown RBP0.85□□□□□ -2.27
SCFD1-218ENST00000556256 OGFRL1Q5TC84 451 aaPredicted RBP0.85□□□□□ -2.27
SCFD1-218ENST00000556256 C9orf84Q5VXU9 1444 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 Q6ZSA8 131 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 HIST2H3AQ71DI3 136 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 KTN1-AS1Q86SY8 53 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 SLC51BQ86UW2 128 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 RPP25LQ8N5L8 163 aaKnown RBP0.85□□□□□ -2.27
SCFD1-218ENST00000556256 C9orf163Q8N9P6 203 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 NAV1Q8NEY1 1877 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 RNF133Q8WVZ7 376 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 OR8D2Q9GZM6 311 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 CYSTM1Q9H1C7 97 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 XPNPEP1Q9NQW7 623 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 C8orf4Q9NR00 106 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 FGFR1OP2Q9NVK5 253 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 TIMM9Q9Y5J7 89 aa0.85□□□□□ -2.27
SCFD1-218ENST00000556256 SCAF11Q99590 1463 aaKnown RBP0.85□□□□□ -2.27
SCFD1-218ENST00000556256 DCCP43146 1447 aa0.84□□□□□ -2.27
SCFD1-218ENST00000556256 A0A0D9SEW6 157 aa0.84□□□□□ -2.27
SCFD1-218ENST00000556256 OR51F1A6NGY5 319 aa0.84□□□□□ -2.27
SCFD1-218ENST00000556256 LEPROTO15243 131 aa0.84□□□□□ -2.27
SCFD1-218ENST00000556256 ACOX3O15254 700 aa0.84□□□□□ -2.27
SCFD1-218ENST00000556256 CREBL2O60519 120 aaPredicted RBP0.84□□□□□ -2.27
SCFD1-218ENST00000556256 ISG15P05161 165 aa0.84□□□□□ -2.27
SCFD1-218ENST00000556256 EVX1P49640 407 aa0.84□□□□□ -2.27
SCFD1-218ENST00000556256 RAB5BP61020 215 aa0.84□□□□□ -2.27
SCFD1-218ENST00000556256 BATFQ16520 125 aa0.84□□□□□ -2.27
SCFD1-218ENST00000556256 TMEM155Q4W5P6 130 aa0.84□□□□□ -2.27
SCFD1-218ENST00000556256 ALKAL1Q6UXT8 129 aa0.84□□□□□ -2.27
SCFD1-218ENST00000556256 ZNF705AQ6ZN79 300 aaPredicted RBP0.84□□□□□ -2.27
SCFD1-218ENST00000556256 GID4Q8IVV7 300 aa0.84□□□□□ -2.27
SCFD1-218ENST00000556256 C10orf67Q8IYJ2 551 aa0.84□□□□□ -2.27
SCFD1-218ENST00000556256 C10orf126Q8N4M7 172 aa0.84□□□□□ -2.27
SCFD1-218ENST00000556256 OR1M1Q8NGA1 313 aa0.84□□□□□ -2.27
SCFD1-218ENST00000556256 PTH2Q96A98 100 aa0.84□□□□□ -2.27
SCFD1-218ENST00000556256 TESCQ96BS2 214 aa0.84□□□□□ -2.27
SCFD1-218ENST00000556256 ROPN1LQ96C74 230 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms