RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 Q6ZRG5 221 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 LY6G5BQ8NDX9 201 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 LFNGQ8NES3 379 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 OR4A16Q8NH70 328 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 OR9G1Q8NH87 305 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 OSR1Q8TAX0 266 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-235ENST00000556082 SCGB1C1Q8TD33 95 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 RAB1CQ92928 201 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 LEAP2Q969E1 77 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 ST6GALNAC6Q969X2 333 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 FAM122AQ96E09 287 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 OR4C12Q96R67 309 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 PCGF1Q9BSM1 259 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 GGACTQ9BVM4 153 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 SH3BGRL3Q9H299 93 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 HRH4Q9H3N8 390 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 SMDT1Q9H4I9 107 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 TMEM14BQ9NUH8 114 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 TMEM140Q9NV12 185 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 FOXA2Q9Y261 457 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-235ENST00000556082 ZNF257Q9Y2Q1 563 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 ANKHD1Q8IWZ3 2542 aaKnown RBP6.75□□□□□ -1.33
ATXN3-235ENST00000556082 USF3Q68DE3 2245 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 A0A1W2PPE3 182 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 C15orf61A6NNL5 157 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 CEBPZOSA8MTT3 80 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 RNASEK-C17orf49H0YIS7 233 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 H3BP45 60 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 SOX15O60248 233 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 IGHV3-7P01780 117 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 PRH1P02810 166 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 ARG1P05089 322 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 IGHV1-8P0DP01 117 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 MDKP21741 143 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-235ENST00000556082 GNLYP22749 145 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 PLA2G5P39877 138 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 CAMLGP49069 296 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 DVL1P1P54792 670 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-235ENST00000556082 HSPE1P61604 102 aaKnown RBP6.75□□□□□ -1.33
ATXN3-235ENST00000556082 TMEM267Q0VDI3 215 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-235ENST00000556082 TMEM177Q53S58 311 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 OR4A47Q6IF82 309 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 OR10P1Q8NGE3 313 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 H1FXQ92522 213 aaKnown RBP6.75□□□□□ -1.33
ATXN3-235ENST00000556082 TIMD4Q96H15 378 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 CLCC1Q96S66 551 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 TMEM147Q9BVK8 224 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 SCRT1Q9BWW7 348 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 QTRT1Q9BXR0 403 aaKnown RBP6.75□□□□□ -1.33
ATXN3-235ENST00000556082 WDR61Q9GZS3 305 aaKnown RBP6.75□□□□□ -1.33
ATXN3-235ENST00000556082 TMEM133Q9H2Q1 129 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 FKBP11Q9NYL4 201 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 BET1LQ9NYM9 111 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 PRNDQ9UKY0 176 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 CARHSP1Q9Y2V2 147 aaKnown RBP6.75□□□□□ -1.33
ATXN3-235ENST00000556082 TANC2Q9HCD6 1990 aa6.75□□□□□ -1.33
ATXN3-235ENST00000556082 ARFGEF3Q5TH69 2177 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 hCG_1809904A0A1W2PP81 198 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 A0A1W2PPE2 198 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 A0A1W2PR64 198 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 A0A1W2PRV1 198 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 C15orf62A8K5M9 175 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 INS-IGF2F8WCM5 200 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 UPK2O00526 184 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 RBMXL2O75526 392 aaKnown RBP6.74□□□□□ -1.33
ATXN3-235ENST00000556082 CRYZL1O95825 349 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 IFNA17P01571 189 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 SOD3P08294 240 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 IL3RAP26951 378 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 MC5RP33032 325 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 SNCAP37840 140 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 GNG10P50151 68 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 PRRX1P54821 245 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 TLE4Q04727 773 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 SLC38A11Q08AI6 406 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 PMS2P11Q13670 270 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 PEA15Q15121 130 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 AKR1C8PQ5T2L2 129 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 TMEM182Q6ZP80 229 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-235ENST00000556082 THNSL2Q86YJ6 484 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 ABHD12Q8N2K0 398 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 BEND2Q8NDZ0 799 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 OR8B3Q8NGG8 313 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 OR13D1Q8NGV5 346 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 OR4A5Q8NH83 315 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 MBD3L1Q8WWY6 194 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 TAF15Q92804 592 aaKnown RBP eCLIP6.74□□□□□ -1.33
ATXN3-235ENST00000556082 NEIL1Q96FI4 390 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-235ENST00000556082 OR8B2Q96RD0 313 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 SEC11CQ9BY50 192 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 KRTAP9-3Q9BYQ3 159 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 CHODLQ9H9P2 273 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 SLC35D1Q9NTN3 355 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 UQCC1Q9NVA1 299 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 ROS1P08922 2347 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 ATRXP46100 2492 aa6.74□□□□□ -1.33
ATXN3-235ENST00000556082 DSCAML1Q8TD84 2053 aa6.73□□□□□ -1.33
ATXN3-235ENST00000556082 CHD8Q9HCK8 2581 aa6.73□□□□□ -1.33
ATXN3-235ENST00000556082 TRAV3A0A0B4J244 114 aa6.73□□□□□ -1.33
ATXN3-235ENST00000556082 FAM157AC9JC47 383 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms