RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 SPCS2Q15005 226 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 CTF1Q16619 201 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 SRSF7Q16629 238 aaKnown RBP eCLIP4.89□□□□□ -1.63
TMEM260-209ENST00000556079 RTL8BQ17RB0 113 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 UBE2NLQ5JXB2 153 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 TMEM69Q5SWH9 247 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 LYSMD2Q8IV50 215 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 MFSD4AQ8N468 514 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 POC5Q8NA72 575 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 ADAD2Q8NCV1 583 aaKnown RBP4.89□□□□□ -1.63
TMEM260-209ENST00000556079 OR51H1Q8NH63 302 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 SRSF12Q8WXF0 261 aaKnown RBP4.89□□□□□ -1.63
TMEM260-209ENST00000556079 SLC25A46Q96AG3 418 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 WDR89Q96FK6 387 aaPredicted RBP4.89□□□□□ -1.63
TMEM260-209ENST00000556079 PHB2Q99623 299 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 DCUN1D5Q9BTE7 237 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 GON7Q9BXV9 100 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 SLC5A7Q9GZV3 580 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 DCSTAMPQ9H295 470 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 EHFQ9NZC4 300 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 ANAPC10Q9UM13 185 aa4.89□□□□□ -1.63
TMEM260-209ENST00000556079 MRPS7Q9Y2R9 242 aaKnown RBP4.89□□□□□ -1.63
TMEM260-209ENST00000556079 IZUMO1RA6ND01 250 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 PPP5D1E7EU14 171 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 OVOL1O14753 267 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 XRCC3O43542 346 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 OR2J3O76001 311 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 RLN1P04808 185 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 RHOGP84095 191 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 CDK10Q15131 360 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 VMA21Q3ZAQ7 101 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 AKIRIN2Q53H80 203 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 IL34Q6ZMJ4 242 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 OVCH2Q7RTZ1 564 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 PUSL1Q8N0Z8 303 aaKnown RBP4.88□□□□□ -1.63
TMEM260-209ENST00000556079 DPF1Q92782 380 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 FYTTD1Q96QD9 318 aaKnown RBP4.88□□□□□ -1.63
TMEM260-209ENST00000556079 RNF5Q99942 180 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 B9D2Q9BPU9 175 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 MIXL1Q9H2W2 232 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 AKIP1Q9NQ31 210 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 IFT46Q9NQC8 304 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 ZC4H2Q9NQZ6 224 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 NSG2Q9Y328 171 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 DMRT1Q9Y5R6 373 aa4.88□□□□□ -1.63
TMEM260-209ENST00000556079 IGHV3-21A0A0B4J1V1 117 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 C13orf42A0A1B0GVH6 325 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 DBX1A6NMT0 343 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 BMPR1BO00238 502 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 MPPED1O15442 326 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 KBTBD11O94819 623 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 GABARAPO95166 117 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 NDUFB8O95169 186 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 DIRAS3O95661 229 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 OR8U8P0C7N1 319 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 PI3P19957 117 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 GNRHRP30968 328 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 HRH1P35367 487 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 LGALS7P47929 136 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 ALDH3B2P48448 385 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 SYNJ2BPP57105 145 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 PITPNAQ00169 270 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 EXOSC2Q13868 293 aaKnown RBP4.87□□□□□ -1.63
TMEM260-209ENST00000556079 IZUMO4Q1ZYL8 232 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 TIMM50Q3ZCQ8 353 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 C4orf46Q504U0 113 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 PHLDA2Q53GA4 152 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 C9orf66Q5T8R8 295 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 AADACL3Q5VUY0 350 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 OR4A47Q6IF82 309 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 FAAP20Q6NZ36 180 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 ADAMTSL5Q6ZMM2 481 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 SPAG16Q8N0X2 631 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 TEX45Q8NA69 505 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 OR5AP2Q8NGF4 316 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 OR10W1Q8NGF6 305 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 OR4D10Q8NGI6 311 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 CACNG8Q8WXS5 425 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 S100A16Q96FQ6 103 aaKnown RBP4.87□□□□□ -1.63
TMEM260-209ENST00000556079 ADTRPQ96IZ2 230 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 ZNF2Q9BSG1 426 aaPredicted RBP4.87□□□□□ -1.63
TMEM260-209ENST00000556079 VCX3AQ9NNX9 186 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 DIABLOQ9NR28 239 aa4.87□□□□□ -1.63
TMEM260-209ENST00000556079 GAR1Q9NY12 217 aaKnown RBP4.87□□□□□ -1.63
TMEM260-209ENST00000556079 LSM4Q9Y4Z0 139 aaKnown RBP4.87□□□□□ -1.63
TMEM260-209ENST00000556079 MFSD2BA6NFX1 497 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 FAM25AB3EWG3 89 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 FAM25CB3EWG5 89 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 FAM25GB3EWG6 89 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 CTDSP2O14595 271 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 SCGNO76038 276 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 DUS4LO95620 317 aaKnown RBP4.86□□□□□ -1.63
TMEM260-209ENST00000556079 IGKV1-39P01597 117 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 IGKV1D-39P04432 117 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 HSPB1P04792 205 aaKnown RBP4.86□□□□□ -1.63
TMEM260-209ENST00000556079 CTXN2P0C2S0 81 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 OR9G9P0C7N8 305 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 RRASP10301 218 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 NAT1P18440 290 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 SLC6A1P30531 599 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms