RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 ZNF355PQ9NSJ1 428 aa7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 COA4Q9NYJ1 87 aa7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 DMRT1Q9Y5R6 373 aa7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 ETV7Q9Y603 341 aa7.09□□□□□ -1.27
VIPAS39-207ENST00000555854 TRAV18A0A075B6X5 111 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 C13orf42A0A1B0GVH6 325 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 HMX3A6NHT5 357 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 H3BMQ9 156 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 BMPR1BO00238 502 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 SCGNO76038 276 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 KBTBD11O94819 623 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 FCER2P06734 321 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 CSN3P07498 182 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 IL6RP08887 468 aaPredicted RBP7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 CTXN2P0C2S0 81 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 OR9G9P0C7N8 305 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 ZP3P21754 424 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 SCAND1P57086 179 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 CBX3Q13185 183 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 IDNKQ5T6J7 187 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 GPR107Q5VW38 600 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 ADAMTSL5Q6ZMM2 481 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 HOGA1Q86XE5 327 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 BEST4Q8NFU0 473 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 OR9G4Q8NGQ1 327 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 TCTEX1D2Q8WW35 142 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 YIPF6Q96EC8 236 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 RSRP1Q9BUV0 290 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 AUNIPQ9H7T9 357 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 RANGRFQ9HD47 186 aaPredicted RBP7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 CCL28Q9NRJ3 127 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 TAS2R8Q9NYW2 309 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 ANAPC10Q9UM13 185 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 SPATA2Q9UM82 520 aa7.08□□□□□ -1.28
VIPAS39-207ENST00000555854 A0A0G2JLM5 398 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 IZUMO1RA6ND01 250 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 MEIS3P1A6NDR6 274 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 TNFSF12O43508 249 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 PPYP01298 95 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 IGHV4-30-4P0DP06 118 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 AREGP15514 252 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 CD40LGP29965 261 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 FCGR2CP31995 323 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 RHOGP84095 191 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 EXOSC2Q13868 293 aaKnown RBP7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 MMD2Q8IY49 270 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 MFSD4AQ8N468 514 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 TTC9CQ8N5M4 171 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 OR4S2Q8NH73 311 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 TMEM167AQ8TBQ9 72 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 SECTM1Q8WVN6 248 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 USMG5Q96IX5 58 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 RCHY1Q96PM5 261 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 FANCD2OSQ96PS1 177 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 OR4C12Q96R67 309 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 PHB2Q99623 299 aa7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 HSD17B10Q99714 261 aaKnown RBP7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 WDR12Q9GZL7 423 aaKnown RBP7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 PEF1Q9UBV8 284 aaKnown RBP7.07□□□□□ -1.28
VIPAS39-207ENST00000555854 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 A0A0A6YYH2 397 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 A6NJ64 397 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 FAM223BA6NKX1 122 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 OR2J3O76001 311 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 OR2A4O95047 310 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 ZNF735P0CB33 412 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 MECP2P51608 486 aaKnown RBP7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 ZNF846Q147U1 533 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 MSMO1Q15800 293 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 KLK9Q2XQG4 91 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 TIMM50Q3ZCQ8 353 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 ZNF66Q6ZN08 573 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 FAM223AQ8IWN6 122 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 LINC00528Q8N1L1 170 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 CCDC140Q96MF4 163 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 OR2A7Q96R45 310 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 TM2D3Q9BRN9 247 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 C19orf73Q9NVV2 129 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 KLK9Q9UKQ9 250 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 MRPS7Q9Y2R9 242 aaKnown RBP7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 PRELID3BQ9Y3B1 194 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 TENM2Q9NT68 2774 aa7.06□□□□□ -1.28
VIPAS39-207ENST00000555854 TRAV3A0A0B4J244 114 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 NPIPB5A8MRT5 1133 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 A8MZ25 164 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 PPP5D1E7EU14 171 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 MPPED1O15442 326 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 SLC22A5O76082 557 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 GABARAPO95166 117 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 HLA-AP01891 365 aaKnown RBP7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 CRYGCP07315 174 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 RPS19P39019 145 aaKnown RBP7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 RPL27AP46776 148 aaKnown RBP7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 TAS2R20P59543 309 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 ARPC4P59998 168 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 LSM3P62310 102 aaKnown RBP7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 C15orf32Q32M92 178 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 OR4A47Q6IF82 309 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 ZNF818PQ6ZRF7 136 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 SSX9Q7RTT3 188 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms