RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 OR8H3Q8N146 312 aa8.2□□□□□ -1.1
SRP54-208ENST00000555557 C9orf62Q8N4C0 152 aa8.2□□□□□ -1.1
SRP54-208ENST00000555557 OR4D5Q8NGN0 318 aa8.2□□□□□ -1.1
SRP54-208ENST00000555557 MS4A7Q9GZW8 240 aaPredicted RBP8.2□□□□□ -1.1
SRP54-208ENST00000555557 TMEM140Q9NV12 185 aa8.2□□□□□ -1.1
SRP54-208ENST00000555557 COMMD9Q9P000 198 aa8.2□□□□□ -1.1
SRP54-208ENST00000555557 TEP1Q99973 2627 aaKnown RBP8.2□□□□□ -1.1
SRP54-208ENST00000555557 A0A1B0GU03 582 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 TSC22D2O75157 780 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 RBMXL2O75526 392 aaKnown RBP8.19□□□□□ -1.1
SRP54-208ENST00000555557 ATG12O94817 140 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 HRASP01112 189 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 IGLV2-23P01705 113 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 MBPP02686 304 aaPredicted RBP8.19□□□□□ -1.1
SRP54-208ENST00000555557 SNRNP70P08621 437 aaKnown RBP8.19□□□□□ -1.1
SRP54-208ENST00000555557 SAA1P0DJI8 122 aaPredicted RBP8.19□□□□□ -1.1
SRP54-208ENST00000555557 OR2B8PP59922 312 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 S100A10P60903 97 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 CYCSP99999 105 aaKnown RBP8.19□□□□□ -1.1
SRP54-208ENST00000555557 SMCO1Q147U7 214 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 AANATQ16613 207 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 CCDC144NLQ6NUI1 221 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 TEX261Q6UWH6 196 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 COMMD7Q86VX2 200 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 BCL6BQ8N143 479 aaPredicted RBP8.19□□□□□ -1.1
SRP54-208ENST00000555557 ZNF680Q8NEM1 530 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 OR1S1Q8NH92 325 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 OSR1Q8TAX0 266 aaPredicted RBP8.19□□□□□ -1.1
SRP54-208ENST00000555557 MAGT1Q9H0U3 335 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 U3KQ87 197 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 OTOGQ6ZRI0 2925 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 TLN2Q9Y4G6 2542 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 OOSP1A8MZH6 123 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 H0YIZ8 118 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 TSPAN4O14817 238 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 KCNAB3O43448 404 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 PITX3O75364 302 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 MPC2O95563 127 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 IFNA7P01567 189 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 MYOD1P15172 320 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 PSMB6P28072 239 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 CD1BP29016 333 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 F2RL1P55085 397 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 KRTAP1-1Q07627 177 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 HES1Q14469 280 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 HABP2Q14520 560 aaPredicted RBP8.19□□□□□ -1.1
SRP54-208ENST00000555557 CLLU1Q5K131 121 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 IL17RELQ6ZVW7 336 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 SPIN2AQ99865 258 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 SMR3AQ99954 134 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 SPIN2BQ9BPZ2 258 aa8.19□□□□□ -1.1
SRP54-208ENST00000555557 LSM5Q9Y4Y9 91 aaKnown RBP8.19□□□□□ -1.1
SRP54-208ENST00000555557 PIGBOS1A0A0B4J2F0 54 aa8.18□□□□□ -1.1
SRP54-208ENST00000555557 MDFIC2A0A1B0GVS7 189 aa8.18□□□□□ -1.1
SRP54-208ENST00000555557 SLC25A17O43808 307 aa8.18□□□□□ -1.1
SRP54-208ENST00000555557 NKX2-1P43699 371 aaPredicted RBP8.18□□□□□ -1.1
SRP54-208ENST00000555557 RAB14P61106 215 aa8.18□□□□□ -1.1
SRP54-208ENST00000555557 POLR2GP62487 172 aaKnown RBP eCLIP8.18□□□□□ -1.1
SRP54-208ENST00000555557 RELBQ01201 579 aa8.18□□□□□ -1.1
SRP54-208ENST00000555557 SPINK9Q5DT21 86 aa8.18□□□□□ -1.1
SRP54-208ENST00000555557 C11orf87Q6NUJ2 197 aa8.18□□□□□ -1.1
SRP54-208ENST00000555557 EAF1Q96JC9 268 aaPredicted RBP8.18□□□□□ -1.1
SRP54-208ENST00000555557 RNF126Q9BV68 326 aa8.18□□□□□ -1.1
SRP54-208ENST00000555557 QTRT1Q9BXR0 403 aaKnown RBP8.18□□□□□ -1.1
SRP54-208ENST00000555557 TPSG1Q9NRR2 321 aa8.18□□□□□ -1.1
SRP54-208ENST00000555557 OR5AC2Q9NZP5 309 aa8.18□□□□□ -1.1
SRP54-208ENST00000555557 FAM96BQ9Y3D0 163 aa8.18□□□□□ -1.1
SRP54-208ENST00000555557 FXYD6-FXYD2A0A087WZ82 144 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 K7EPK0 472 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 OPN1MWP04001 364 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 OPN1MW2P0DN77 364 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 OPN1MW3P0DN78 364 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 SLC25A6P12236 298 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 POU2AF1Q16633 256 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 PUSL1Q8N0Z8 303 aaKnown RBP8.17□□□□□ -1.1
SRP54-208ENST00000555557 FAM71E2Q8N5Q1 922 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 OR4A16Q8NH70 328 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 NANPQ8TBE9 248 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 ASB13Q8WXK3 278 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.17□□□□□ -1.1
SRP54-208ENST00000555557 MBD2Q9UBB5 411 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 F8P00451 2351 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 FAM90A9PA6NNJ1 464 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 UPK2O00526 184 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 ST8SIA3O43173 380 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 MOSP00540 346 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 IL6RP08887 468 aaPredicted RBP8.17□□□□□ -1.1
SRP54-208ENST00000555557 LGALS7P47929 136 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 ID3Q02535 119 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 PJVKQ0ZLH3 352 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 PSG5Q15238 335 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 MMDQ15546 238 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 CLCC1Q96S66 551 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 FBXL15Q9H469 300 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 UBQLN2Q9UHD9 624 aa8.17□□□□□ -1.1
SRP54-208ENST00000555557 RCL1Q9Y2P8 373 aaKnown RBP8.17□□□□□ -1.1
SRP54-208ENST00000555557 ANK3Q12955 4377 aaKnown RBP8.16□□□□□ -1.1
SRP54-208ENST00000555557 CD5LO43866 347 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 CHST1O43916 411 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 SSSCA1O60232 199 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms