RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 SCAF11Q99590 1463 aaKnown RBP0.25□□□□□ -2.37
SRP54-207ENST00000555535 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.25□□□□□ -2.37
SRP54-207ENST00000555535 TRAPPC13A5PLN9 417 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 GGT3PA6NGU5 568 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 TRPC5OSA6NMA1 111 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 C9JCJ5 164 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 PHGR1C9JFL3 82 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 I3L521 148 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 SDCBPO00560 298 aaPredicted RBP0.25□□□□□ -2.37
SRP54-207ENST00000555535 ITGB1BP1O14713 200 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 MRPS14O60783 128 aaKnown RBP0.25□□□□□ -2.37
SRP54-207ENST00000555535 SCN2BO60939 215 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 NSA2O95478 260 aaKnown RBP0.25□□□□□ -2.37
SRP54-207ENST00000555535 HLA-DMBP28068 263 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 KDELR2P33947 212 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 RAB13P51153 203 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 EMP1P54849 157 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 HLA-DRB3P79483 266 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 PMS2P3Q13401 168 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 RBM48Q5RL73 367 aaKnown RBP0.25□□□□□ -2.37
SRP54-207ENST00000555535 FAM45BPQ6NSW5 357 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 GPHB5Q86YW7 130 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 FUNDC1Q8IVP5 155 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 GID4Q8IVV7 300 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 UMODL1-AS1Q8N2C9 162 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 TBC1D19Q8N5T2 526 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 OR8B3Q8NGG8 313 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 OR2T27Q8NH04 317 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 OR5AK3PQ8NH89 298 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 STOML3Q8TAV4 291 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 EEF1AKMT1Q8WVE0 214 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 RORBQ92753 470 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 MS4A6EQ96DS6 147 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 ANKRD36BP1Q96IX9 119 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 HBEGFQ99075 208 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 SERPINI1Q99574 410 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 NDEL1Q9GZM8 345 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 UBQLN4Q9NRR5 601 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 MED9Q9NWA0 146 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 C1orf109Q9NX04 203 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 SNURFQ9Y675 71 aa0.25□□□□□ -2.37
SRP54-207ENST00000555535 NUP160Q12769 1436 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 A0A1W2PP64 1363 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 LRPPRCP42704 1394 aaKnown RBP0.24□□□□□ -2.37
SRP54-207ENST00000555535 ABCC12Q96J65 1359 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 TRBV6-7A0A0A0MS04 114 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 C5orf49A4QMS7 147 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 IBA57-AS1B1ANH7 110 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 CCRL2O00421 344 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 LEPROTO15243 131 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 PLA2G10O15496 165 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 STX10O60499 249 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 MT-CO2P00403 227 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 NPPAP01160 153 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 PMP2P02689 132 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 REG1AP05451 166 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 HIST1H1CP16403 213 aaKnown RBP0.24□□□□□ -2.37
SRP54-207ENST00000555535 MIPP30301 263 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 S100A7P31151 101 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 CSN1S1P47710 185 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 HIST1H4AP62805 103 aaKnown RBP0.24□□□□□ -2.37
SRP54-207ENST00000555535 FABP5Q01469 135 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 PLPPR5Q32ZL2 321 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 SSX8Q7RTT4 187 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 FAM19A2Q8N3H0 131 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 RPP25LQ8N5L8 163 aaKnown RBP0.24□□□□□ -2.37
SRP54-207ENST00000555535 TMEM251Q8N6I4 163 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 UBL4BQ8N7F7 174 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 ZNF565Q8N9K5 539 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 ZNF439Q8NDP4 499 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 LFNGQ8NES3 379 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 WFDC11Q8NEX6 87 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 DNAJB3Q8WWF6 145 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 CPNE2Q96FN4 548 aaPredicted RBP0.24□□□□□ -2.37
SRP54-207ENST00000555535 OBSCN-AS1Q96MR7 158 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 CCL13Q99616 98 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 UPF3BQ9BZI7 483 aaKnown RBP0.24□□□□□ -2.37
SRP54-207ENST00000555535 DERL2Q9GZP9 239 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 CHST6Q9GZX3 395 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 MS4A6AQ9H2W1 248 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 PAQR5Q9NXK6 330 aaPredicted RBP0.24□□□□□ -2.37
SRP54-207ENST00000555535 CHMP5Q9NZZ3 219 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 PRELID1Q9Y255 219 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 COQ4Q9Y3A0 265 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 ZNF106Q9H2Y7 1883 aaKnown RBP0.24□□□□□ -2.37
SRP54-207ENST00000555535 E9PCH4 1651 aa0.24□□□□□ -2.37
SRP54-207ENST00000555535 RIMS2Q9UQ26 1411 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 TTC21AQ8NDW8 1320 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 OR51F1A6NGY5 319 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 C21orf140B9A014 251 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 FTCDNL1E5RQL4 147 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 F8W036 122 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 SLC22A1O15245 554 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 SYNGR1O43759 233 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 UGT2B7P16662 529 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 CD40LGP29965 261 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 ZNF93P35789 620 aaPredicted RBP0.23□□□□□ -2.37
SRP54-207ENST00000555535 KCNJ3P48549 501 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 AKR1C1Q04828 323 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 SLAMF1Q13291 335 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms