RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 Q6ZRG5 221 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 C1orf122Q6ZSJ8 110 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 C11orf42Q8N5U0 333 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 CLRN3Q8NCR9 226 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 LFNGQ8NES3 379 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 TNFRSF14Q92956 283 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 LSM10Q969L4 123 aaKnown RBP8.01□□□□□ -1.13
PSEN1-213ENST00000555386 SMIM3Q9BZL3 60 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 WFDC1Q9HC57 220 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 FAM96BQ9Y3D0 163 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 A0A0U1RQK1 487 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 A0A1W2PPE3 182 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 ZNF729A6NN14 1252 aaPredicted RBP8□□□□□ -1.13
PSEN1-213ENST00000555386 RNF212BA8MTL3 300 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 UMAD1C9J7I0 102 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 J3QL48 77 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 HSPA12AO43301 675 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 TSPAN15O95858 294 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 SERPINE2P07093 398 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 H2AFB1P0C5Y9 115 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 ATF4P18848 351 aaPredicted RBP8□□□□□ -1.13
PSEN1-213ENST00000555386 SAA4P35542 130 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 GNG10P50151 68 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 LGALS4P56470 323 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 SCGB2A2Q13296 93 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 MSMO1Q15800 293 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 DHRS7BQ6IAN0 325 aaPredicted RBP8□□□□□ -1.13
PSEN1-213ENST00000555386 HCP5Q6MZN7 132 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 RBMS3Q6XE24 437 aaKnown RBP8□□□□□ -1.13
PSEN1-213ENST00000555386 PRIMA1Q86XR5 153 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 PUSL1Q8N0Z8 303 aaKnown RBP8□□□□□ -1.13
PSEN1-213ENST00000555386 ZBTB34Q8NCN2 500 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 OR13D1Q8NGV5 346 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 OR1L1Q8NH94 360 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 CORO2AQ92828 525 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 TOLLIPQ9H0E2 274 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 TMEM133Q9H2Q1 129 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 SMDT1Q9H4I9 107 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 LIN7CQ9NUP9 197 aaKnown RBP8□□□□□ -1.13
PSEN1-213ENST00000555386 IDI2-AS1Q9NZ38 188 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 KCNIP1Q9NZI2 227 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 PLA2G2EQ9NZK7 142 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 ZNRD1Q9P1U0 126 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 CACFD1Q9UGQ2 172 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 A0A1B0GW64 132 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 C12orf77C9JDV5 145 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 GZMHP20718 246 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 CAMLGP49069 296 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 UBE2E1P51965 193 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 POLR2GP62487 172 aaKnown RBP eCLIP8□□□□□ -1.13
PSEN1-213ENST00000555386 SRSF3P84103 164 aaKnown RBP8□□□□□ -1.13
PSEN1-213ENST00000555386 NHLH2Q02577 135 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 PEA15Q15121 130 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 HEPN1Q6WQI6 88 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 LHFPL4Q7Z7J7 247 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 ABHD12Q8N2K0 398 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 TMEM252Q8N6L7 170 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 ZNF418Q8TF45 676 aaPredicted RBP8□□□□□ -1.13
PSEN1-213ENST00000555386 IL1F10Q8WWZ1 152 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 GNPNAT1Q96EK6 184 aaPredicted RBP8□□□□□ -1.13
PSEN1-213ENST00000555386 BSCL2Q96G97 398 aaPredicted RBP8□□□□□ -1.13
PSEN1-213ENST00000555386 ZNF48Q96MX3 618 aaPredicted RBP8□□□□□ -1.13
PSEN1-213ENST00000555386 RAB40CQ96S21 281 aa8□□□□□ -1.13
PSEN1-213ENST00000555386 ATRQ13535 2644 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 IGHV2-26A0A0B4J1V2 119 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 IGSF23A1L1A6 192 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 BTBD17A6NE02 478 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 FAM24AA6NFZ4 105 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 WRBO00258 174 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 TOR1AO14656 332 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 SPINT2O43291 252 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 SSSCA1O60232 199 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 DFFBO76075 338 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 HBZP02008 142 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 SFTA3P0C7M3 94 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 SNCAP37840 140 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 AKR1C2P52895 323 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 PAX5Q02548 391 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 AKR1C1Q04828 323 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 GUCA2BQ16661 112 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 DPPA3Q6W0C5 159 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 LINC00528Q8N1L1 170 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 FAM216AQ8WUB2 273 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 PBDC1Q9BVG4 233 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 CLEC7AQ9BXN2 247 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 HIPK2Q9H2X6 1198 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 UNKLQ9H9P5 680 aaKnown RBP7.99□□□□□ -1.13
PSEN1-213ENST00000555386 GNG12Q9UBI6 72 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 HILPDAQ9Y5L2 63 aa7.99□□□□□ -1.13
PSEN1-213ENST00000555386 FAM74A7A6NL05 159 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 FAM90A26D6RGX4 464 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 C15orf65H3BRN8 121 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 TCF21O43680 179 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 VENTXO95231 258 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 IGLV2-14P01704 120 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 RBP4P02753 201 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 PRH1P02810 166 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 OR8U9P0C7N5 309 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 CGB3P0DN86 165 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 CGB7P0DN87 165 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms