RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SLC5A7Q9GZV3 580 aa9.07□□□□□ -0.96
VRK1-204ENST00000555351 PLEKHA2Q9HB19 425 aa9.07□□□□□ -0.96
VRK1-204ENST00000555351 AKIP1Q9NQ31 210 aa9.07□□□□□ -0.96
VRK1-204ENST00000555351 CCL28Q9NRJ3 127 aa9.07□□□□□ -0.96
VRK1-204ENST00000555351 SLC2A9Q9NRM0 540 aa9.07□□□□□ -0.96
VRK1-204ENST00000555351 BET1LQ9NYM9 111 aa9.07□□□□□ -0.96
VRK1-204ENST00000555351 ANKRD34BA5PLL1 514 aa9.06□□□□□ -0.96
VRK1-204ENST00000555351 TEX22C9J3V5 150 aa9.06□□□□□ -0.96
VRK1-204ENST00000555351 CRYGCP07315 174 aa9.06□□□□□ -0.96
VRK1-204ENST00000555351 IL6RP08887 468 aaPredicted RBP9.06□□□□□ -0.96
VRK1-204ENST00000555351 SPNP16150 400 aa9.06□□□□□ -0.96
VRK1-204ENST00000555351 PRSS3P35030 304 aa9.06□□□□□ -0.96
VRK1-204ENST00000555351 TAS2R20P59543 309 aa9.06□□□□□ -0.96
VRK1-204ENST00000555351 HERV-K104P61576 105 aa9.06□□□□□ -0.96
VRK1-204ENST00000555351 RPL8P62917 257 aaKnown RBP9.06□□□□□ -0.96
VRK1-204ENST00000555351 ZNF45Q02386 682 aa9.06□□□□□ -0.96
VRK1-204ENST00000555351 ATP5G2Q06055 141 aa9.06□□□□□ -0.96
VRK1-204ENST00000555351 OR2B11Q5JQS5 317 aa9.06□□□□□ -0.96
VRK1-204ENST00000555351 C11orf87Q6NUJ2 197 aa9.06□□□□□ -0.96
VRK1-204ENST00000555351 ANKRD13BQ86YJ7 626 aa9.06□□□□□ -0.96
VRK1-204ENST00000555351 SPAG16Q8N0X2 631 aa9.06□□□□□ -0.96
VRK1-204ENST00000555351 MOB3AQ96BX8 217 aa9.06□□□□□ -0.96
VRK1-204ENST00000555351 SRSF8Q9BRL6 282 aaKnown RBP9.06□□□□□ -0.96
VRK1-204ENST00000555351 FUNDC2Q9BWH2 189 aa9.06□□□□□ -0.96
VRK1-204ENST00000555351 SCPEP1Q9HB40 452 aa9.06□□□□□ -0.96
VRK1-204ENST00000555351 COMMD9Q9P000 198 aa9.06□□□□□ -0.96
VRK1-204ENST00000555351 TNCP24821 2201 aa9.05□□□□□ -0.96
VRK1-204ENST00000555351 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.05□□□□□ -0.96
VRK1-204ENST00000555351 SMIM31A0A1B0GVY4 71 aa9.05□□□□□ -0.96
VRK1-204ENST00000555351 A8MZ25 164 aa9.05□□□□□ -0.96
VRK1-204ENST00000555351 H0Y980 276 aa9.05□□□□□ -0.96
VRK1-204ENST00000555351 RBMXL2O75526 392 aaKnown RBP9.05□□□□□ -0.96
VRK1-204ENST00000555351 TPPPO94811 219 aa9.05□□□□□ -0.96
VRK1-204ENST00000555351 NQO2P16083 231 aa9.05□□□□□ -0.96
VRK1-204ENST00000555351 HIST1H1BP16401 226 aaKnown RBP9.05□□□□□ -0.96
VRK1-204ENST00000555351 HLA-GP17693 338 aa9.05□□□□□ -0.96
VRK1-204ENST00000555351 TGFBR1P36897 503 aa9.05□□□□□ -0.96
VRK1-204ENST00000555351 LSM3P62310 102 aaKnown RBP9.05□□□□□ -0.96
VRK1-204ENST00000555351 RPEL1Q2QD12 228 aa9.05□□□□□ -0.96
VRK1-204ENST00000555351 THOC7Q6I9Y2 204 aaKnown RBP9.05□□□□□ -0.96
VRK1-204ENST00000555351 OR4A47Q6IF82 309 aa9.05□□□□□ -0.96
VRK1-204ENST00000555351 ZNF818PQ6ZRF7 136 aa9.05□□□□□ -0.96
VRK1-204ENST00000555351 VKORC1L1Q8N0U8 176 aa9.05□□□□□ -0.96
VRK1-204ENST00000555351 OR2K2Q8NGT1 345 aa9.05□□□□□ -0.96
VRK1-204ENST00000555351 GPX8Q8TED1 209 aa9.05□□□□□ -0.96
VRK1-204ENST00000555351 FAM212BQ9NTI7 297 aaPredicted RBP9.05□□□□□ -0.96
VRK1-204ENST00000555351 EHFQ9NZC4 300 aa9.05□□□□□ -0.96
VRK1-204ENST00000555351 PEMTQ9UBM1 199 aa9.05□□□□□ -0.96
VRK1-204ENST00000555351 U3KQK5 164 aa9.05□□□□□ -0.96
VRK1-204ENST00000555351 DPPA5A6NC42 116 aa9.04□□□□□ -0.96
VRK1-204ENST00000555351 SULT1C2O00338 296 aa9.04□□□□□ -0.96
VRK1-204ENST00000555351 APELAP0DMC3 54 aa9.04□□□□□ -0.96
VRK1-204ENST00000555351 PTHLHP12272 177 aa9.04□□□□□ -0.96
VRK1-204ENST00000555351 GNRHRP30968 328 aa9.04□□□□□ -0.96
VRK1-204ENST00000555351 SYNJ2BPP57105 145 aa9.04□□□□□ -0.96
VRK1-204ENST00000555351 FXYD4P59646 89 aa9.04□□□□□ -0.96
VRK1-204ENST00000555351 EXOSC2Q13868 293 aaKnown RBP9.04□□□□□ -0.96
VRK1-204ENST00000555351 C10orf55Q5SWW7 151 aa9.04□□□□□ -0.96
VRK1-204ENST00000555351 LPCAT3Q6P1A2 487 aa9.04□□□□□ -0.96
VRK1-204ENST00000555351 IL34Q6ZMJ4 242 aa9.04□□□□□ -0.96
VRK1-204ENST00000555351 HSD17B13Q7Z5P4 300 aaPredicted RBP9.04□□□□□ -0.96
VRK1-204ENST00000555351 CMTM1Q8IZ96 169 aa9.04□□□□□ -0.96
VRK1-204ENST00000555351 OR5H2Q8NGV7 314 aa9.04□□□□□ -0.96
VRK1-204ENST00000555351 OR6F1Q8NGZ6 308 aa9.04□□□□□ -0.96
VRK1-204ENST00000555351 FYTTD1Q96QD9 318 aaKnown RBP9.04□□□□□ -0.96
VRK1-204ENST00000555351 SORL1Q92673 2214 aa9.04□□□□□ -0.96
VRK1-204ENST00000555351 BMPR1BO00238 502 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 UPK2O00526 184 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 TNFSF12O43508 249 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 CSN3P07498 182 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 CTRB1P17538 263 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 F2RP25116 425 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 PSMB6P28072 239 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 RFX2P48378 723 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 RORCP51449 518 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 MECP2P51608 486 aaKnown RBP9.03□□□□□ -0.96
VRK1-204ENST00000555351 NCS1P62166 190 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 C15orf32Q32M92 178 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 CTRB2Q6GPI1 263 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 MZT2AQ6P582 158 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 TMEM17Q86X19 198 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 LYSMD2Q8IV50 215 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 Q8N402 240 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 AP3S1Q92572 193 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 GPHA2Q96T91 129 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 ZNF2Q9BSG1 426 aaPredicted RBP9.03□□□□□ -0.96
VRK1-204ENST00000555351 DNAH9Q9NYC9 4486 aa9.03□□□□□ -0.96
VRK1-204ENST00000555351 A0A1B0GW64 132 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 MEIS3P1A6NDR6 274 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 HMX3A6NHT5 357 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 E7EUB6 86 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 LGALS9O00182 355 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 CYB5BO43169 146 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 GGCTO75223 188 aaKnown RBP9.02□□□□□ -0.97
VRK1-204ENST00000555351 PGLYRP1O75594 196 aaPredicted RBP9.02□□□□□ -0.97
VRK1-204ENST00000555351 GABARAPO95166 117 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 TRBV12-3P01733 135 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 EIF4EP06730 217 aaKnown RBP9.02□□□□□ -0.97
VRK1-204ENST00000555351 S100GP29377 79 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 RCVRNP35243 200 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms