RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 HSPB9Q9BQS6 159 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 C19orf24Q9BVV8 132 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 WNT10AQ9GZT5 417 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 OR51J1Q9H342 316 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 BEX1Q9HBH7 125 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 TPSG1Q9NRR2 321 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 PIGBOS1A0A0B4J2F0 54 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 C9orf170A2RU37 121 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 UPK2O00526 184 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 CREBL2O60519 120 aaPredicted RBP10.01□□□□□ -0.81
SYNE2-219ENST00000555323 ATG12O94817 140 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 H2AFB2P0C5Z0 115 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 OR4E1P0C645 316 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 P0C879 139 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 ANXA7P20073 488 aaKnown RBP10.01□□□□□ -0.81
SYNE2-219ENST00000555323 MAS1LP35410 378 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 G6PCP35575 357 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 CRIP2P52943 208 aaPredicted RBP10.01□□□□□ -0.81
SYNE2-219ENST00000555323 ERVK-16P61578 105 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 PJVKQ0ZLH3 352 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 PPP1R1AQ13522 171 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 DCTN2Q13561 401 aaKnown RBP10.01□□□□□ -0.81
SYNE2-219ENST00000555323 SSX9Q7RTT3 188 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 SLC35E3Q7Z769 313 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 MMD2Q8IY49 270 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 SELENOHQ8IZQ5 122 aaKnown RBP10.01□□□□□ -0.81
SYNE2-219ENST00000555323 DMBX1Q8NFW5 382 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 LHFPL5Q8TAF8 219 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 ENKURQ8TC29 256 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 WIPF2Q8TF74 440 aaPredicted RBP10.01□□□□□ -0.81
SYNE2-219ENST00000555323 RBPMSQ93062 196 aaKnown RBP10.01□□□□□ -0.81
SYNE2-219ENST00000555323 MARVELD1Q9BSK0 173 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 ZNF430Q9H8G1 570 aaPredicted RBP10.01□□□□□ -0.81
SYNE2-219ENST00000555323 TMEM140Q9NV12 185 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 NUDT15Q9NV35 164 aa10.01□□□□□ -0.81
SYNE2-219ENST00000555323 TRAV6A0A075B6T7 132 aa10□□□□□ -0.81
SYNE2-219ENST00000555323 AP4M1O00189 453 aa10□□□□□ -0.81
SYNE2-219ENST00000555323 CA2P00918 260 aa10□□□□□ -0.81
SYNE2-219ENST00000555323 IGKV1-5P01602 117 aa10□□□□□ -0.81
SYNE2-219ENST00000555323 EGR2P11161 476 aaPredicted RBP10□□□□□ -0.81
SYNE2-219ENST00000555323 MDKP21741 143 aaPredicted RBP10□□□□□ -0.81
SYNE2-219ENST00000555323 PROK1P58294 105 aa10□□□□□ -0.81
SYNE2-219ENST00000555323 SRPXP78539 464 aa10□□□□□ -0.81
SYNE2-219ENST00000555323 TRIM16LQ309B1 348 aa10□□□□□ -0.81
SYNE2-219ENST00000555323 C9orf152Q5JTZ5 239 aa10□□□□□ -0.81
SYNE2-219ENST00000555323 ZNF695Q8IW36 515 aa10□□□□□ -0.81
SYNE2-219ENST00000555323 FAM219AQ8IW50 185 aa10□□□□□ -0.81
SYNE2-219ENST00000555323 FOXRED2Q8IWF2 684 aa10□□□□□ -0.81
SYNE2-219ENST00000555323 LGI3Q8N145 548 aa10□□□□□ -0.81
SYNE2-219ENST00000555323 LSM10Q969L4 123 aaKnown RBP10□□□□□ -0.81
SYNE2-219ENST00000555323 CLCC1Q96S66 551 aa10□□□□□ -0.81
SYNE2-219ENST00000555323 RNF114Q9Y508 228 aa10□□□□□ -0.81
SYNE2-219ENST00000555323 FBN1P35555 2871 aaKnown RBP10□□□□□ -0.81
SYNE2-219ENST00000555323 TRAV3A0A0B4J244 114 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 A0A0B4J2A0 478 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 DUS4LO95620 317 aaKnown RBP9.99□□□□□ -0.81
SYNE2-219ENST00000555323 PTTG1O95997 202 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 IL5P05113 134 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 VDAC1P21796 283 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 VAMP1P23763 118 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 VDAC2P45880 294 aaPredicted RBP9.99□□□□□ -0.81
SYNE2-219ENST00000555323 RPL8P62917 257 aaKnown RBP9.99□□□□□ -0.81
SYNE2-219ENST00000555323 NDPQ00604 133 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 DHRS2Q13268 280 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 FXYD3Q14802 87 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 ANKRD55Q3KP44 614 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 AWAT1Q58HT5 328 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 TMEM268Q5VZI3 342 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 PLET1Q6UQ28 207 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 H2BFWTQ7Z2G1 175 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 LYG2Q86SG7 212 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 SGMS2Q8NHU3 365 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 TMEM68Q96MH6 324 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 SHPKQ9UHJ6 478 aa9.99□□□□□ -0.81
SYNE2-219ENST00000555323 ATRQ13535 2644 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 DUXBA0A1W2PPF3 345 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 ATP6V0E1O15342 81 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 HLA-AP01891 365 aaKnown RBP9.98□□□□□ -0.81
SYNE2-219ENST00000555323 OR9G9P0C7N8 305 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 HLA-GP17693 338 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 PPIFP30405 207 aaKnown RBP9.98□□□□□ -0.81
SYNE2-219ENST00000555323 TMEM95Q3KNT9 176 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 C4orf46Q504U0 113 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 AKIRIN2Q53H80 203 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 C19orf54Q5BKX5 351 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 ZNF429Q86V71 674 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 STPG2Q8N412 459 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 CHPT1Q8WUD6 406 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 MITD1Q8WV92 249 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 ARPC1AQ92747 370 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 MDFIQ99750 246 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 GON7Q9BXV9 100 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 FKBP11Q9NYL4 201 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 FBXO7Q9Y3I1 522 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 TNCP24821 2201 aa9.98□□□□□ -0.81
SYNE2-219ENST00000555323 PLXNB1O43157 2135 aa9.97□□□□□ -0.81
SYNE2-219ENST00000555323 A0A0B4J293 547 aa9.97□□□□□ -0.81
SYNE2-219ENST00000555323 A0A0G2JRQ6 117 aa9.97□□□□□ -0.81
SYNE2-219ENST00000555323 E7EUB6 86 aa9.97□□□□□ -0.81
SYNE2-219ENST00000555323 INMT-MINDY4F8WBC2 141 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms