RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PSMD7P51665 324 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 CRIP2P52943 208 aaPredicted RBP3.21□□□□□ -1.9
VTI1B-203ENST00000554636 SLC35B1P78383 322 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 EGFEM1PQ0D2K5 195 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 ARL16Q0P5N6 197 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 KIAA0141Q14154 515 aaPredicted RBP3.21□□□□□ -1.9
VTI1B-203ENST00000554636 PNLIPRP3Q17RR3 467 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 DEFB136Q30KP8 78 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 CXorf66Q5JRM2 361 aaPredicted RBP3.21□□□□□ -1.9
VTI1B-203ENST00000554636 WDR73Q6P4I2 378 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 TEX38Q6PEX7 206 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 GLDNQ6ZMI3 551 aaPredicted RBP3.21□□□□□ -1.9
VTI1B-203ENST00000554636 Q6ZS49 121 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 NOXA1Q86UR1 476 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 ZNF695Q8IW36 515 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 OR4A4PQ8NGN8 299 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 OR10R2Q8NGX6 335 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 MRAPQ8TCY5 172 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 FCGR1BQ92637 280 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 RAB3CQ96E17 227 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 DUX3Q96PT4 197 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 YTHDF1Q9BYJ9 559 aaKnown RBP3.21□□□□□ -1.9
VTI1B-203ENST00000554636 OR51J1Q9H342 316 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 Q9H521 79 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 GNB4Q9HAV0 340 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.21□□□□□ -1.9
VTI1B-203ENST00000554636 PARP11Q9NR21 331 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 TXNL4BQ9NX01 149 aaKnown RBP3.21□□□□□ -1.9
VTI1B-203ENST00000554636 RDH8Q9NYR8 311 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 ELF5Q9UKW6 265 aaPredicted RBP3.21□□□□□ -1.9
VTI1B-203ENST00000554636 MGAT4AQ9UM21 535 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 WASHC3Q9Y3C0 194 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 FBXO7Q9Y3I1 522 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 A3GALT2U3KPV4 340 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 SORL1Q92673 2214 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 IGHV4OR15-8A0A075B7B6 117 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 TRBV6-7A0A0A0MS04 114 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 TRAV41A0A0B4J266 112 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 WI2-2373I1.2A0A1W2PRP0 233 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 M0R1X1 148 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 CCL24O00175 119 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 SOX15O60248 233 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 RBBP9O75884 186 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 DUS4LO95620 317 aaKnown RBP3.2□□□□□ -1.9
VTI1B-203ENST00000554636 DIRAS3O95661 229 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 IGLV2-23P01705 113 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 IGKV1-16P04430 117 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 TFAP2AP05549 437 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 CRYGBP07316 175 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 GSTT2P0CG29 244 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 GSTT2BP0CG30 244 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 OR5H8P0DN80 308 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 DTYMKP23919 212 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 ZBTB25P24278 435 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 CEACAM6P40199 344 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 SERPINB10P48595 397 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 BRWD1-AS2P59051 145 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 GNB1P62873 340 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 KIR2DS1Q14954 304 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 ECSCRQ19T08 205 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 KCTD21Q4G0X4 260 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 IGSF11Q5DX21 431 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 SFXN4Q6P4A7 337 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 PDPNQ86YL7 162 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 H1FOOQ8IZA3 346 aaPredicted RBP3.2□□□□□ -1.9
VTI1B-203ENST00000554636 ZNF491Q8N8L2 437 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 ZNF383Q8NA42 475 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 DRAXINQ8NBI3 349 aaPredicted RBP3.2□□□□□ -1.9
VTI1B-203ENST00000554636 MINDY2Q8NBR6 621 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.2□□□□□ -1.9
VTI1B-203ENST00000554636 OR8U1Q8NH10 309 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 LGALS14Q8TCE9 139 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 C4orf3Q8WVX3 66 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 MAFIPQ8WZ33 124 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 TRIM63Q969Q1 353 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 SLC25A38Q96DW6 304 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 CHCHD6Q9BRQ6 235 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 GPR61Q9BZJ8 451 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 OR2D2Q9H210 308 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 OR51E2Q9H255 320 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 GHITMQ9H3K2 345 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 FBXL15Q9H469 300 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 RNF167Q9H6Y7 350 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 SDHAF2Q9NX18 166 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 KIAA1456Q9P272 454 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 ZNF230Q9UIE0 474 aaPredicted RBP3.2□□□□□ -1.9
VTI1B-203ENST00000554636 RNF150Q9ULK6 438 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 GAB2Q9UQC2 676 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 WSB1Q9Y6I7 421 aa3.2□□□□□ -1.9
VTI1B-203ENST00000554636 A0A075B6Q4 140 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 A0A1W2PN81 502 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 METTL21EPA6NDL7 271 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 H7C2Y5 167 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 I3L521 148 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 FCN1O00602 326 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 ARPC1BO15143 372 aaKnown RBP3.19□□□□□ -1.9
VTI1B-203ENST00000554636 BET1O15155 118 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 SSX5O60225 188 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 CA2P00918 260 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 APOA2P02652 100 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms