RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 PAFAH1B2P68402 229 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 ODF4Q2M2E3 257 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 BEX5Q5H9J7 111 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 KRBOX4Q5JUW0 171 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 OR5B3Q8NH48 314 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 OSR1Q8TAX0 266 aaPredicted RBP2.78□□□□□ -1.96
SEC23A-207ENST00000554615 TCTEX1D2Q8WW35 142 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 TRGV9Q99603 122 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 HRH4Q9H3N8 390 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 CDC42EP3Q9UKI2 254 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 YTHDF2Q9Y5A9 579 aaKnown RBP2.78□□□□□ -1.96
SEC23A-207ENST00000554615 FAM221AA4D161 298 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 A8MTW9 85 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 TEX22C9J3V5 150 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 H0YJW9 148 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 MRPL33O75394 65 aaKnown RBP2.78□□□□□ -1.96
SEC23A-207ENST00000554615 AGFG2O95081 481 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 S1PR2O95136 353 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 CT45A6P0DMU7 189 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 CT45A5P0DMU8 189 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 CT45A7P0DMV0 189 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 MYF5P13349 255 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 GDF1P27539 372 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 GABRA2P47869 451 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 COL10A1Q03692 680 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 CT45A1Q5HYN5 189 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 CDPF1Q6NVV7 123 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 TMEM88Q6PEY1 159 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.78□□□□□ -1.96
SEC23A-207ENST00000554615 ZNF383Q8NA42 475 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 C9orf106Q8NAJ2 232 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 OR13A1Q8NGR1 328 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 OR51H1Q8NH63 302 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 CT45A3Q8NHU0 189 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 MAFIPQ8WZ33 124 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 FXYD5Q96DB9 178 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 FAM210BQ96KR6 192 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 RAB9BQ9NP90 201 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 MYO15AQ9UKN7 3530 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 SRCAPQ6ZRS2 3230 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 VPS13CQ709C8 3753 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 F5H5K5 113 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 F8W735 103 aaPredicted RBP2.78□□□□□ -1.96
SEC23A-207ENST00000554615 SLC31A2O15432 143 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 SSSCA1O60232 199 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 C1QL1O75973 258 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 MT-ND6P03923 174 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 CECR9P0C854 216 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 NDUFB7P17568 137 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 VAMP1P23763 118 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 OR2B8PP59922 312 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 HERV-K104P61576 105 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 TFF3Q07654 80 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 CLN3Q13286 438 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 TMEM183BQ1AE95 376 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 HCP5Q6MZN7 132 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 DUX4L9Q6RFH8 374 aaPredicted RBP2.78□□□□□ -1.96
SEC23A-207ENST00000554615 ZNF600Q6ZNG1 722 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 C16orf82Q7Z2V1 217 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 PDPNQ86YL7 162 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 ZNF695Q8IW36 515 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 LYPD1Q8N2G4 141 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 OR2Z1Q8NG97 314 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 CFHR4Q92496 578 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 NEIL1Q96FI4 390 aaPredicted RBP2.78□□□□□ -1.96
SEC23A-207ENST00000554615 RBM24Q9BX46 236 aaKnown RBP2.78□□□□□ -1.96
SEC23A-207ENST00000554615 PPDPFQ9H3Y8 114 aa2.78□□□□□ -1.96
SEC23A-207ENST00000554615 HUWE1Q7Z6Z7 4374 aaKnown RBP2.78□□□□□ -1.97
SEC23A-207ENST00000554615 KIAA2026Q5HYC2 2103 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 hCG_1809904A0A1W2PP81 198 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 A0A1W2PR64 198 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 A0A1W2PRV1 198 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 MAP1LC3B2A6NCE7 125 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 MARCH11A6NNE9 402 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 GPR37O15354 613 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 DLEU1O43261 78 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 NXPH3O95157 252 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 IFNA1P01562 189 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 CELA3BP08861 270 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 METTL15P1P0C7V9 234 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 IL3RAP26951 378 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 TGFBR3Q03167 851 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 SP6Q3SY56 376 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 ABHD17BQ5VST6 288 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 ZNF787Q6DD87 383 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 NIT1Q86X76 327 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 STX12Q86Y82 276 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 KRTAP1-3Q8IUG1 177 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 OR11H6Q8NGC7 330 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 OR8B3Q8NGG8 313 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 SLC25A40Q8TBP6 338 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 DTD1Q8TEA8 209 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 CASTOR1Q8WTX7 329 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 OR8B2Q96RD0 313 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 MAP1LC3BQ9GZQ8 125 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 TMEM231Q9H6L2 316 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 GCM1Q9NP62 436 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 CACNG5Q9UF02 275 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 FBXO7Q9Y3I1 522 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 U3KQE9 123 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms