RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 TRAV14DV4A0A0A6YYC5 116 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 SRRM4A7MD48 611 aaKnown RBP6.14□□□□□ -1.43
TDP1-209ENST00000554180 SMLR1H3BR10 107 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 BOLA2-SMG1P6H3BVE0 249 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 SMAD7O15105 426 aaKnown RBP6.14□□□□□ -1.43
TDP1-209ENST00000554180 RBMXL2O75526 392 aaKnown RBP6.14□□□□□ -1.43
TDP1-209ENST00000554180 MED6O75586 246 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 NDUFA3O95167 84 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 IGKV1D-33P01593 117 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 IGKV1-33P01594 117 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 FAM106CPP0CH98 169 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 PVALBP20472 110 aaPredicted RBP6.14□□□□□ -1.43
TDP1-209ENST00000554180 MAS1LP35410 378 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 S100A10P60903 97 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 SPCS3P61009 180 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 RPL8P62917 257 aaKnown RBP6.14□□□□□ -1.43
TDP1-209ENST00000554180 RELBQ01201 579 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 TNFRSF9Q07011 255 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 LRRC37A5PQ49AS3 106 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 RUSC1-AS1Q66K80 236 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 PRSS54Q6PEW0 395 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 TMEM65Q6PI78 240 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 BRD3OSQ6XYD6 125 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 SPNS3Q6ZMD2 512 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 SSX9Q7RTT3 188 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 VKORC1L1Q8N0U8 176 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 Q8N6K4 173 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 NPBQ8NG41 125 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 OR5B3Q8NH48 314 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 OR4A16Q8NH70 328 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 C17orf50Q8WW18 174 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 WDR89Q96FK6 387 aaPredicted RBP6.14□□□□□ -1.43
TDP1-209ENST00000554180 RAB40CQ96S21 281 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 TMEM160Q9NX00 188 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 MBD2Q9UBB5 411 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 RCL1Q9Y2P8 373 aaKnown RBP6.14□□□□□ -1.43
TDP1-209ENST00000554180 ZNF257Q9Y2Q1 563 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 AKAP9Q99996 3911 aa6.14□□□□□ -1.43
TDP1-209ENST00000554180 TEX15Q9BXT5 2789 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 SONP18583 2426 aaKnown RBP6.13□□□□□ -1.43
TDP1-209ENST00000554180 IGHV3OR16-10A0A075B7F0 116 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 FXYD6-FXYD2A0A087WZ82 144 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 A0A0U1RQK1 487 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 E5RGE8 158 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 K7EPK0 472 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 WRBO00258 174 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 UPK2O00526 184 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 RRHO14718 337 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 NBR2O15453 112 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 SYNGR2O43760 224 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 SCGB1D2O95969 90 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 SNRNP70P08621 437 aaKnown RBP6.13□□□□□ -1.43
TDP1-209ENST00000554180 OR9G9P0C7N8 305 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 FOSL1P15407 271 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 EIF2B2P49770 351 aaKnown RBP6.13□□□□□ -1.43
TDP1-209ENST00000554180 TAS2R30P59541 319 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 KRTAP1-1Q07627 177 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 HES1Q14469 280 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 ZNF345Q14585 488 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 PSG5Q15238 335 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 MMDQ15546 238 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 IZUMO4Q1ZYL8 232 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 LRRC75BQ2VPJ9 315 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 Q5BKY6 102 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 CXorf66Q5JRM2 361 aaPredicted RBP6.13□□□□□ -1.43
TDP1-209ENST00000554180 MMD2Q8IY49 270 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 FAM71E2Q8N5Q1 922 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 OR11H4Q8NGC9 324 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 EAF1Q96JC9 268 aaPredicted RBP6.13□□□□□ -1.43
TDP1-209ENST00000554180 CIB3Q96Q77 187 aaPredicted RBP6.13□□□□□ -1.43
TDP1-209ENST00000554180 RNF126Q9BV68 326 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 C1RLQ9NZP8 487 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 KIAA1456Q9P272 454 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 PITPNC1Q9UKF7 332 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 ITGB1BP2Q9UKP3 347 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 NSG2Q9Y328 171 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 SIGLEC9Q9Y336 463 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 LSM5Q9Y4Y9 91 aaKnown RBP6.13□□□□□ -1.43
TDP1-209ENST00000554180 WSB1Q9Y6I7 421 aa6.13□□□□□ -1.43
TDP1-209ENST00000554180 TRAV3A0A0B4J244 114 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 H0YIZ8 118 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 L7N2F9 121 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 SLC25A17O43808 307 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 SSSCA1O60232 199 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 GPR137BO60478 399 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 TSC22D2O75157 780 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 OR2F2O95006 317 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 CRYGBP07316 175 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 TMEM11P17152 192 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 HNF1AP20823 631 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 HIVEP2P31629 2446 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 NUP62P37198 522 aaPredicted RBP6.12□□□□□ -1.43
TDP1-209ENST00000554180 P2RY1P47900 373 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 OR2B8PP59922 312 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 HSPE1P61604 102 aaKnown RBP6.12□□□□□ -1.43
TDP1-209ENST00000554180 POLR2GP62487 172 aaKnown RBP eCLIP6.12□□□□□ -1.43
TDP1-209ENST00000554180 VAMP2P63027 116 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 SCGB2A2Q13296 93 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 OR2F1Q13607 317 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 PRSS8Q16651 343 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms