RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 GHITMQ9H3K2 345 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 RIBC2Q9H4K1 309 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 TUBA4BQ9H853 241 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 RHOFQ9HBH0 211 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 OR2S2Q9NQN1 319 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 FAM118AQ9NWS6 357 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 GNG12Q9UBI6 72 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 JPT1Q9UK76 154 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 TRAPPC2LQ9UL33 140 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.28□□□□□ -2.04
SLIRP-202ENST00000553981 MRPS28Q9Y2Q9 187 aaKnown RBP2.28□□□□□ -2.04
SLIRP-202ENST00000553981 ARL2BPQ9Y2Y0 163 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 PEX16Q9Y5Y5 336 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 AGRNO00468 2067 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.27□□□□□ -2.05
SLIRP-202ENST00000553981 IGHV3-35A0A0C4DH35 117 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 TEX22C9J3V5 150 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 G3V2T6 193 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 H0Y980 276 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 SOCS1O15524 211 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 TXNL1O43396 289 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 GPX5O75715 221 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 OR2J3O76001 311 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 RPSAP08865 295 aaKnown RBP2.27□□□□□ -2.05
SLIRP-202ENST00000553981 RBMY1A1P0DJD3 496 aaKnown RBP2.27□□□□□ -2.05
SLIRP-202ENST00000553981 RBMY1CP0DJD4 496 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 CD37P11049 281 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 FOLR2P14207 255 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 MGMTP16455 207 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 RAB3AP20336 220 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 CALB2P22676 271 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 CBLN1P23435 193 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 IL3RAP26951 378 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 BDKRB2P30411 391 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 SNRPGP62308 76 aaKnown RBP2.27□□□□□ -2.05
SLIRP-202ENST00000553981 RPL30P62888 115 aaKnown RBP2.27□□□□□ -2.05
SLIRP-202ENST00000553981 RBMY1FQ15415 496 aaKnown RBP2.27□□□□□ -2.05
SLIRP-202ENST00000553981 TMEM30BQ3MIR4 351 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 DGAT2L7PQ6IED9 249 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 ARHGAP24Q8N264 748 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 ACBD7Q8N6N7 88 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 OR5D14Q8NGL3 314 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 OR8J1Q8NGP2 316 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 OR5AK2Q8NH90 309 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 TSEN15Q8WW01 171 aaKnown RBP2.27□□□□□ -2.05
SLIRP-202ENST00000553981 RNF183Q96D59 192 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 GPER1Q99527 375 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 SELENOIQ9C0D9 397 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 CST11Q9H112 138 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 METTL9Q9H1A3 318 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 SLA2Q9H6Q3 261 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 ZNF355PQ9NSJ1 428 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 SDHAF2Q9NX18 166 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 AK3Q9UIJ7 227 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 ELF5Q9UKW6 265 aaPredicted RBP2.27□□□□□ -2.05
SLIRP-202ENST00000553981 KCNK7Q9Y2U2 307 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 WASHC3Q9Y3C0 194 aa2.27□□□□□ -2.05
SLIRP-202ENST00000553981 NACAE9PAV3 2078 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 IGHV3OR16-8A0A075B7F1 116 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 LOC102724200A0A096LPH7 203 aaPredicted RBP2.26□□□□□ -2.05
SLIRP-202ENST00000553981 TRAV3A0A0B4J244 114 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 PNMA8CA0A1B0GUJ8 204 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 NUPR2A6NF83 97 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 MFSD2BA6NFX1 497 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 OR5H14A6NHG9 310 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 TMEM212A6NML5 194 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 TMEM14DPA8MWL7 114 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 MCRIP1C9JLW8 97 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 H3BUA1 57 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 M0R2N4 97 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 EI24O14681 340 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 SPINT2O43291 252 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 TPPPO94811 219 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 OR2A4O95047 310 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 CNIH1O95406 144 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 C8orf88P0DMB2 117 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 GTF2F2P13984 249 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 AREGP15514 252 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 RPL35AP18077 110 aaKnown RBP2.26□□□□□ -2.05
SLIRP-202ENST00000553981 ZP3P21754 424 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 MFAP2P55001 183 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 RHOGP84095 191 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 TMED1Q13445 227 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 EIF4EBP1Q13541 118 aaPredicted RBP2.26□□□□□ -2.05
SLIRP-202ENST00000553981 EXOSC2Q13868 293 aaKnown RBP2.26□□□□□ -2.05
SLIRP-202ENST00000553981 FLOT2Q14254 428 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 GUCA2BQ16661 112 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 RPEL1Q2QD12 228 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 KLK9Q2XQG4 91 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 MOGAT2Q3SYC2 334 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 IGSF11Q5DX21 431 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 LCN12Q6JVE5 192 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 FAM71F2Q6NXP2 309 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 ZNF773Q6PK81 442 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 BTNL8Q6UX41 500 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 FAM220AQ7Z4H9 259 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 CEACAM19Q7Z692 300 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 LINC00596Q86U02 117 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 LRRTM1Q86UE6 522 aa2.26□□□□□ -2.05
SLIRP-202ENST00000553981 GTSCR1Q86UQ5 136 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms