RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 NECAP1Q8NC96 275 aa13.57□□□□□ -0.24
FOXN3-204ENST00000553840 GIMAP1Q8WWP7 306 aa13.57□□□□□ -0.24
FOXN3-204ENST00000553840 ASCL2Q99929 193 aa13.57□□□□□ -0.24
FOXN3-204ENST00000553840 AKIP1Q9NQ31 210 aa13.57□□□□□ -0.24
FOXN3-204ENST00000553840 ZNF257Q9Y2Q1 563 aa13.57□□□□□ -0.24
FOXN3-204ENST00000553840 MEIS3P1A6NDR6 274 aa13.56□□□□□ -0.24
FOXN3-204ENST00000553840 H0Y980 276 aa13.56□□□□□ -0.24
FOXN3-204ENST00000553840 DHFRP00374 187 aa13.56□□□□□ -0.24
FOXN3-204ENST00000553840 FCER2P06734 321 aa13.56□□□□□ -0.24
FOXN3-204ENST00000553840 PTHLHP12272 177 aa13.56□□□□□ -0.24
FOXN3-204ENST00000553840 RPL27AP46776 148 aaKnown RBP13.56□□□□□ -0.24
FOXN3-204ENST00000553840 SYNJ2BPP57105 145 aa13.56□□□□□ -0.24
FOXN3-204ENST00000553840 EXOSC2Q13868 293 aaKnown RBP13.56□□□□□ -0.24
FOXN3-204ENST00000553840 C10orf55Q5SWW7 151 aa13.56□□□□□ -0.24
FOXN3-204ENST00000553840 SPAG16Q8N0X2 631 aa13.56□□□□□ -0.24
FOXN3-204ENST00000553840 FYTTD1Q96QD9 318 aaKnown RBP13.56□□□□□ -0.24
FOXN3-204ENST00000553840 NAA50Q9GZZ1 169 aaKnown RBP13.56□□□□□ -0.24
FOXN3-204ENST00000553840 PEMTQ9UBM1 199 aa13.56□□□□□ -0.24
FOXN3-204ENST00000553840 TRBV9A0A0B4J1U6 114 aa13.55□□□□□ -0.24
FOXN3-204ENST00000553840 RBFOX2O43251 390 aaKnown RBP eCLIP13.55□□□□□ -0.247e-7■■■■■ 38.5
FOXN3-204ENST00000553840 PRH1P02810 166 aa13.55□□□□□ -0.24
FOXN3-204ENST00000553840 RPL8P62917 257 aaKnown RBP13.55□□□□□ -0.24
FOXN3-204ENST00000553840 SSX9Q7RTT3 188 aa13.55□□□□□ -0.24
FOXN3-204ENST00000553840 OR4A5Q8NH83 315 aa13.55□□□□□ -0.24
FOXN3-204ENST00000553840 CD300LFQ8TDQ1 290 aa13.55□□□□□ -0.24
FOXN3-204ENST00000553840 KCTD12Q96CX2 325 aaKnown RBP13.55□□□□□ -0.24
FOXN3-204ENST00000553840 HRASLSQ9HDD0 168 aa13.55□□□□□ -0.24
FOXN3-204ENST00000553840 EHFQ9NZC4 300 aa13.55□□□□□ -0.24
FOXN3-204ENST00000553840 SMIM31A0A1B0GVY4 71 aa13.54□□□□□ -0.24
FOXN3-204ENST00000553840 NPIPB5A8MRT5 1133 aa13.54□□□□□ -0.24
FOXN3-204ENST00000553840 SULT1C2O00338 296 aa13.54□□□□□ -0.24
FOXN3-204ENST00000553840 HPRT1P00492 218 aa13.54□□□□□ -0.24
FOXN3-204ENST00000553840 RPL5P46777 297 aaKnown RBP13.54□□□□□ -0.24
FOXN3-204ENST00000553840 BRWD1-AS2P59051 145 aa13.54□□□□□ -0.24
FOXN3-204ENST00000553840 TAS2R31P59538 309 aa13.54□□□□□ -0.24
FOXN3-204ENST00000553840 TAS2R46P59540 309 aa13.54□□□□□ -0.24
FOXN3-204ENST00000553840 ZNF45Q02386 682 aa13.54□□□□□ -0.24
FOXN3-204ENST00000553840 TMEM17Q86X19 198 aa13.54□□□□□ -0.24
FOXN3-204ENST00000553840 GPHA2Q96T91 129 aa13.54□□□□□ -0.24
FOXN3-204ENST00000553840 BET1LQ9NYM9 111 aa13.54□□□□□ -0.24
FOXN3-204ENST00000553840 HMX3A6NHT5 357 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 RBMXL2O75526 392 aaKnown RBP13.53□□□□□ -0.24
FOXN3-204ENST00000553840 GABARAPO95166 117 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 TRBV12-3P01733 135 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 FRMD6-AS1P0C7T7 363 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 ZNF735P0CB33 412 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 NQO2P16083 231 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 PRSS3P35030 304 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 TAS2R20P59543 309 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 C15orf32Q32M92 178 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 AADACL3Q5VUY0 350 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 OR4A47Q6IF82 309 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 ZNF818PQ6ZRF7 136 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 HAPLN4Q86UW8 402 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 CLVS1Q8IUQ0 354 aaPredicted RBP13.53□□□□□ -0.24
FOXN3-204ENST00000553840 SGPP2Q8IWX5 399 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 OR5H2Q8NGV7 314 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 SLC25A46Q96AG3 418 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 SLC2A9Q9NRM0 540 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 SIGLEC8Q9NYZ4 499 aa13.53□□□□□ -0.24
FOXN3-204ENST00000553840 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.52□□□□□ -0.25
FOXN3-204ENST00000553840 TEX22C9J3V5 150 aa13.52□□□□□ -0.25
FOXN3-204ENST00000553840 OR2J3O76001 311 aa13.52□□□□□ -0.25
FOXN3-204ENST00000553840 IL6RP08887 468 aaPredicted RBP13.52□□□□□ -0.25
FOXN3-204ENST00000553840 DEFA4P12838 97 aa13.52□□□□□ -0.25
FOXN3-204ENST00000553840 HIST1H1BP16401 226 aaKnown RBP13.52□□□□□ -0.25
FOXN3-204ENST00000553840 HLA-GP17693 338 aa13.52□□□□□ -0.25
FOXN3-204ENST00000553840 CTF1Q16619 201 aa13.52□□□□□ -0.25
FOXN3-204ENST00000553840 LCN12Q6JVE5 192 aa13.52□□□□□ -0.25
FOXN3-204ENST00000553840 DHRS11Q6UWP2 260 aa13.52□□□□□ -0.25
FOXN3-204ENST00000553840 DMBX1Q8NFW5 382 aa13.52□□□□□ -0.25
FOXN3-204ENST00000553840 CMTM3Q96MX0 182 aa13.52□□□□□ -0.25
FOXN3-204ENST00000553840 ZMAT4Q9H898 229 aa13.52□□□□□ -0.25
FOXN3-204ENST00000553840 PSMB6P28072 239 aa13.51□□□□□ -0.25
FOXN3-204ENST00000553840 RFX2P48378 723 aa13.51□□□□□ -0.25
FOXN3-204ENST00000553840 GTSCR1Q86UQ5 136 aa13.51□□□□□ -0.25
FOXN3-204ENST00000553840 SBSPONQ8IVN8 264 aa13.51□□□□□ -0.25
FOXN3-204ENST00000553840 CMTM1Q8IZ96 169 aa13.51□□□□□ -0.25
FOXN3-204ENST00000553840 Q8N402 240 aa13.51□□□□□ -0.25
FOXN3-204ENST00000553840 OR51H1Q8NH63 302 aa13.51□□□□□ -0.25
FOXN3-204ENST00000553840 ZNF2Q9BSG1 426 aaPredicted RBP13.51□□□□□ -0.25
FOXN3-204ENST00000553840 COMMD5Q9GZQ3 224 aa13.51□□□□□ -0.25
FOXN3-204ENST00000553840 PLEKHA2Q9HB19 425 aa13.51□□□□□ -0.25
FOXN3-204ENST00000553840 COMMD3Q9UBI1 195 aa13.51□□□□□ -0.25
FOXN3-204ENST00000553840 FBXL7Q9UJT9 491 aa13.51□□□□□ -0.25
FOXN3-204ENST00000553840 BMPR1BO00238 502 aa13.5□□□□□ -0.25
FOXN3-204ENST00000553840 APOA1P02647 267 aa13.5□□□□□ -0.25
FOXN3-204ENST00000553840 PMP2P02689 132 aa13.5□□□□□ -0.25
FOXN3-204ENST00000553840 CRYGCP07315 174 aa13.5□□□□□ -0.25
FOXN3-204ENST00000553840 CSN3P07498 182 aa13.5□□□□□ -0.25
FOXN3-204ENST00000553840 NAT1P18440 290 aa13.5□□□□□ -0.25
FOXN3-204ENST00000553840 ERVK-16P61578 105 aa13.5□□□□□ -0.25
FOXN3-204ENST00000553840 POU2AF1Q16633 256 aa13.5□□□□□ -0.25
FOXN3-204ENST00000553840 IL34Q6ZMJ4 242 aa13.5□□□□□ -0.25
FOXN3-204ENST00000553840 OR6F1Q8NGZ6 308 aa13.5□□□□□ -0.25
FOXN3-204ENST00000553840 MOB3AQ96BX8 217 aa13.5□□□□□ -0.25
FOXN3-204ENST00000553840 ADAM30Q9UKF2 790 aa13.5□□□□□ -0.25
FOXN3-204ENST00000553840 ANAPC10Q9UM13 185 aa13.5□□□□□ -0.25
FOXN3-204ENST00000553840 E7EUB6 86 aa13.49□□□□□ -0.25
FOXN3-204ENST00000553840 GGCTO75223 188 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms