RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 KAAG1Q9UBP8 84 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 LINC00312Q9Y6C7 94 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 NOTCH1P46531 2555 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 CMYA5Q8N3K9 4069 aa12.95□□□□□ -0.34
ACTN1-209ENST00000553659 RBFOX2O43251 390 aaKnown RBP eCLIP12.94□□□□□ -0.34
ACTN1-209ENST00000553659 TFF1P04155 84 aa12.94□□□□□ -0.34
ACTN1-209ENST00000553659 LPAR6P43657 344 aa12.94□□□□□ -0.34
ACTN1-209ENST00000553659 TAS2R30P59541 319 aa12.94□□□□□ -0.34
ACTN1-209ENST00000553659 ZNF585BQ52M93 769 aa12.94□□□□□ -0.34
ACTN1-209ENST00000553659 RFESDQ8TAC1 157 aa12.94□□□□□ -0.34
ACTN1-209ENST00000553659 CCL13Q99616 98 aa12.94□□□□□ -0.34
ACTN1-209ENST00000553659 SDHAF2Q9NX18 166 aa12.94□□□□□ -0.34
ACTN1-209ENST00000553659 IDI2-AS1Q9NZ38 188 aa12.94□□□□□ -0.34
ACTN1-209ENST00000553659 PSG11Q9UQ72 335 aa12.94□□□□□ -0.34
ACTN1-209ENST00000553659 KPTNQ9Y664 436 aa12.94□□□□□ -0.34
ACTN1-209ENST00000553659 TET2Q6N021 2002 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-209ENST00000553659 FAM90A9PA6NNJ1 464 aa12.93□□□□□ -0.34
ACTN1-209ENST00000553659 TOR1AO14656 332 aa12.93□□□□□ -0.34
ACTN1-209ENST00000553659 FGF16O43320 207 aa12.93□□□□□ -0.34
ACTN1-209ENST00000553659 SCAF4O95104 1147 aaKnown RBP12.93□□□□□ -0.34
ACTN1-209ENST00000553659 LOXL3P58215 753 aa12.93□□□□□ -0.34
ACTN1-209ENST00000553659 POLR2GP62487 172 aaKnown RBP eCLIP12.93□□□□□ -0.34
ACTN1-209ENST00000553659 EWSR1Q01844 656 aaKnown RBP eCLIP12.93□□□□□ -0.34
ACTN1-209ENST00000553659 LRRC10Q5BKY1 277 aa12.93□□□□□ -0.34
ACTN1-209ENST00000553659 Q6ZSV7 163 aa12.93□□□□□ -0.34
ACTN1-209ENST00000553659 SPAG16Q8N0X2 631 aa12.93□□□□□ -0.34
ACTN1-209ENST00000553659 FGFRL1Q8N441 504 aa12.93□□□□□ -0.34
ACTN1-209ENST00000553659 PIP4P2Q8N4L2 257 aa12.93□□□□□ -0.34
ACTN1-209ENST00000553659 SAT2Q96F10 170 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-209ENST00000553659 ADTRPQ96IZ2 230 aa12.93□□□□□ -0.34
ACTN1-209ENST00000553659 AGMATQ9BSE5 352 aa12.93□□□□□ -0.34
ACTN1-209ENST00000553659 C16orf95Q9H693 158 aa12.93□□□□□ -0.34
ACTN1-209ENST00000553659 SLC25A10Q9UBX3 287 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-209ENST00000553659 RPUSD1Q9UJJ7 312 aaKnown RBP12.93□□□□□ -0.34
ACTN1-209ENST00000553659 PRELID3BQ9Y3B1 194 aa12.93□□□□□ -0.34
ACTN1-209ENST00000553659 FAM96BQ9Y3D0 163 aa12.93□□□□□ -0.34
ACTN1-209ENST00000553659 WSB1Q9Y6I7 421 aa12.93□□□□□ -0.34
ACTN1-209ENST00000553659 RAB29O14966 203 aa12.92□□□□□ -0.34
ACTN1-209ENST00000553659 NDUFB3O43676 98 aa12.92□□□□□ -0.34
ACTN1-209ENST00000553659 SSSCA1O60232 199 aa12.92□□□□□ -0.34
ACTN1-209ENST00000553659 IGKV1-39P01597 117 aa12.92□□□□□ -0.34
ACTN1-209ENST00000553659 IGKV1D-39P04432 117 aa12.92□□□□□ -0.34
ACTN1-209ENST00000553659 SEC11BP0C7V7 166 aa12.92□□□□□ -0.34
ACTN1-209ENST00000553659 CAV2P51636 162 aa12.92□□□□□ -0.34
ACTN1-209ENST00000553659 AANATQ16613 207 aa12.92□□□□□ -0.34
ACTN1-209ENST00000553659 C17orf58Q2M2W7 97 aa12.92□□□□□ -0.34
ACTN1-209ENST00000553659 RPL7L1Q6DKI1 246 aaKnown RBP12.92□□□□□ -0.34
ACTN1-209ENST00000553659 VMO1Q7Z5L0 202 aa12.92□□□□□ -0.34
ACTN1-209ENST00000553659 STX12Q86Y82 276 aa12.92□□□□□ -0.34
ACTN1-209ENST00000553659 GPHA2Q96T91 129 aa12.92□□□□□ -0.34
ACTN1-209ENST00000553659 ABHD14AQ9BUJ0 271 aa12.92□□□□□ -0.34
ACTN1-209ENST00000553659 ARV1Q9H2C2 271 aa12.92□□□□□ -0.34
ACTN1-209ENST00000553659 CACNG5Q9UF02 275 aa12.92□□□□□ -0.34
ACTN1-209ENST00000553659 RNF150Q9ULK6 438 aa12.92□□□□□ -0.34
ACTN1-209ENST00000553659 IGHV3-43A0A0B4J1X8 118 aa12.91□□□□□ -0.34
ACTN1-209ENST00000553659 MFSD2BA6NFX1 497 aa12.91□□□□□ -0.34
ACTN1-209ENST00000553659 ST8SIA5O15466 376 aa12.91□□□□□ -0.34
ACTN1-209ENST00000553659 DFFBO76075 338 aa12.91□□□□□ -0.34
ACTN1-209ENST00000553659 TSPAN15O95858 294 aa12.91□□□□□ -0.34
ACTN1-209ENST00000553659 HPRT1P00492 218 aa12.91□□□□□ -0.34
ACTN1-209ENST00000553659 IGKV1-5P01602 117 aa12.91□□□□□ -0.34
ACTN1-209ENST00000553659 IGHV3-43DP0DP04 118 aa12.91□□□□□ -0.34
ACTN1-209ENST00000553659 RAB5CP51148 216 aa12.91□□□□□ -0.34
ACTN1-209ENST00000553659 BLOC1S1P78537 153 aa12.91□□□□□ -0.34
ACTN1-209ENST00000553659 CXorf66Q5JRM2 361 aaPredicted RBP12.91□□□□□ -0.34
ACTN1-209ENST00000553659 TMEM252Q8N6L7 170 aa12.91□□□□□ -0.34
ACTN1-209ENST00000553659 FAM216BQ8N7L0 139 aa12.91□□□□□ -0.34
ACTN1-209ENST00000553659 LY6G5BQ8NDX9 201 aa12.91□□□□□ -0.34
ACTN1-209ENST00000553659 DCTN5Q9BTE1 182 aa12.91□□□□□ -0.34
ACTN1-209ENST00000553659 KRBOX1C9JBD0 128 aa12.9□□□□□ -0.34
ACTN1-209ENST00000553659 SYNGR2O43760 224 aa12.9□□□□□ -0.34
ACTN1-209ENST00000553659 CHST1O43916 411 aa12.9□□□□□ -0.34
ACTN1-209ENST00000553659 TSPAN9O75954 239 aa12.9□□□□□ -0.34
ACTN1-209ENST00000553659 FBP1P09467 338 aa12.9□□□□□ -0.34
ACTN1-209ENST00000553659 NDUFB7P17568 137 aa12.9□□□□□ -0.34
ACTN1-209ENST00000553659 DUTP33316 252 aaKnown RBP12.9□□□□□ -0.34
ACTN1-209ENST00000553659 THBS3P49746 956 aa12.9□□□□□ -0.34
ACTN1-209ENST00000553659 DHRS7BQ6IAN0 325 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-209ENST00000553659 UQCC3Q6UW78 93 aa12.9□□□□□ -0.34
ACTN1-209ENST00000553659 C1QL4Q86Z23 238 aa12.9□□□□□ -0.34
ACTN1-209ENST00000553659 SMIM8Q96KF7 97 aa12.9□□□□□ -0.34
ACTN1-209ENST00000553659 CXorf58Q96LI9 332 aa12.9□□□□□ -0.34
ACTN1-209ENST00000553659 GINS3Q9BRX5 216 aa12.9□□□□□ -0.34
ACTN1-209ENST00000553659 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-209ENST00000553659 ZNRD1Q9P1U0 126 aa12.9□□□□□ -0.34
ACTN1-209ENST00000553659 TRBV23-1A0A0A0MS06 115 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 A0A0G2JRQ6 117 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 RAB19A4D1S5 217 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 BTBD17A6NE02 478 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 I3L521 148 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 GPR37O15354 613 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 P0C879 139 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 SULT1A2P50226 295 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 ERVK-16P61578 105 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 RPL30P62888 115 aaKnown RBP12.89□□□□□ -0.35
ACTN1-209ENST00000553659 LTC4SQ16873 150 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 TOR2AQ5JU69 321 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 DUX4L9Q6RFH8 374 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-209ENST00000553659 FAM110DQ8TAY7 271 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-209ENST00000553659 PCNPQ8WW12 178 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms