RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 PRSS8Q16651 343 aa9.03□□□□□ -0.96
SRP54-203ENST00000553544 POC5Q8NA72 575 aa9.03□□□□□ -0.96
SRP54-203ENST00000553544 MS4A10Q96PG2 267 aa9.03□□□□□ -0.96
SRP54-203ENST00000553544 TUBA4BQ9H853 241 aa9.03□□□□□ -0.96
SRP54-203ENST00000553544 MRPS7Q9Y2R9 242 aaKnown RBP9.03□□□□□ -0.96
SRP54-203ENST00000553544 ZNF701M0R085 212 aaPredicted RBP9.02□□□□□ -0.97
SRP54-203ENST00000553544 IGLV1-51P01701 117 aa9.02□□□□□ -0.97
SRP54-203ENST00000553544 IGHV3-11P01762 117 aa9.02□□□□□ -0.97
SRP54-203ENST00000553544 TRGV3P03979 118 aa9.02□□□□□ -0.97
SRP54-203ENST00000553544 PTHLHP12272 177 aa9.02□□□□□ -0.97
SRP54-203ENST00000553544 TPPP2P59282 170 aa9.02□□□□□ -0.97
SRP54-203ENST00000553544 MSMO1Q15800 293 aa9.02□□□□□ -0.97
SRP54-203ENST00000553544 VMA21Q3ZAQ7 101 aa9.02□□□□□ -0.97
SRP54-203ENST00000553544 KCTD9Q7L273 389 aa9.02□□□□□ -0.97
SRP54-203ENST00000553544 OR5T1Q8NG75 326 aa9.02□□□□□ -0.97
SRP54-203ENST00000553544 OR5AP2Q8NGF4 316 aa9.02□□□□□ -0.97
SRP54-203ENST00000553544 SNAPC3Q92966 411 aa9.02□□□□□ -0.97
SRP54-203ENST00000553544 HSD17B10Q99714 261 aaKnown RBP9.02□□□□□ -0.97
SRP54-203ENST00000553544 EXTL2Q9UBQ6 330 aa9.02□□□□□ -0.97
SRP54-203ENST00000553544 PRELID3BQ9Y3B1 194 aa9.02□□□□□ -0.97
SRP54-203ENST00000553544 H3BMQ9 156 aa9.01□□□□□ -0.97
SRP54-203ENST00000553544 CREBL2O60519 120 aaPredicted RBP9.01□□□□□ -0.97
SRP54-203ENST00000553544 HPGDSO60760 199 aa9.01□□□□□ -0.97
SRP54-203ENST00000553544 FCGR3BO75015 233 aa9.01□□□□□ -0.97
SRP54-203ENST00000553544 EIF4EP06730 217 aaKnown RBP9.01□□□□□ -0.97
SRP54-203ENST00000553544 SAA1P0DJI8 122 aaPredicted RBP9.01□□□□□ -0.97
SRP54-203ENST00000553544 AADACP22760 399 aa9.01□□□□□ -0.97
SRP54-203ENST00000553544 S100GP29377 79 aa9.01□□□□□ -0.97
SRP54-203ENST00000553544 FCGR2CP31995 323 aa9.01□□□□□ -0.97
SRP54-203ENST00000553544 RCVRNP35243 200 aa9.01□□□□□ -0.97
SRP54-203ENST00000553544 HERV-K104P61576 105 aa9.01□□□□□ -0.97
SRP54-203ENST00000553544 SSBP1Q04837 148 aaKnown RBP9.01□□□□□ -0.97
SRP54-203ENST00000553544 CDK10Q15131 360 aa9.01□□□□□ -0.97
SRP54-203ENST00000553544 ZNF66Q6ZN08 573 aa9.01□□□□□ -0.97
SRP54-203ENST00000553544 IDO2Q6ZQW0 420 aa9.01□□□□□ -0.97
SRP54-203ENST00000553544 MFSD4AQ8N468 514 aa9.01□□□□□ -0.97
SRP54-203ENST00000553544 ZBTB34Q8NCN2 500 aa9.01□□□□□ -0.97
SRP54-203ENST00000553544 OR5H2Q8NGV7 314 aa9.01□□□□□ -0.97
SRP54-203ENST00000553544 SRSF12Q8WXF0 261 aaKnown RBP9.01□□□□□ -0.97
SRP54-203ENST00000553544 RSRP1Q9BUV0 290 aa9.01□□□□□ -0.97
SRP54-203ENST00000553544 TINAGL1Q9GZM7 467 aaPredicted RBP9.01□□□□□ -0.97
SRP54-203ENST00000553544 NDUFA13Q9P0J0 144 aa9.01□□□□□ -0.97
SRP54-203ENST00000553544 RSL24D1Q9UHA3 163 aaKnown RBP9.01□□□□□ -0.97
SRP54-203ENST00000553544 ANAPC10Q9UM13 185 aa9.01□□□□□ -0.97
SRP54-203ENST00000553544 A0A0G2JLM5 398 aa9□□□□□ -0.97
SRP54-203ENST00000553544 MSGN1A6NI15 193 aa9□□□□□ -0.97
SRP54-203ENST00000553544 H0Y980 276 aa9□□□□□ -0.97
SRP54-203ENST00000553544 PPYP01298 95 aa9□□□□□ -0.97
SRP54-203ENST00000553544 ELK1P19419 428 aa9□□□□□ -0.97
SRP54-203ENST00000553544 TBPP20226 339 aa9□□□□□ -0.97
SRP54-203ENST00000553544 KIR2DS2P43631 304 aa9□□□□□ -0.97
SRP54-203ENST00000553544 CATR1Q13166 79 aa9□□□□□ -0.97
SRP54-203ENST00000553544 SPCS2Q15005 226 aa9□□□□□ -0.97
SRP54-203ENST00000553544 TNXAQ16473 311 aa9□□□□□ -0.97
SRP54-203ENST00000553544 HAPLN4Q86UW8 402 aa9□□□□□ -0.97
SRP54-203ENST00000553544 TMEM17Q86X19 198 aa9□□□□□ -0.97
SRP54-203ENST00000553544 MMD2Q8IY49 270 aa9□□□□□ -0.97
SRP54-203ENST00000553544 ADAD2Q8NCV1 583 aaKnown RBP9□□□□□ -0.97
SRP54-203ENST00000553544 OR4S2Q8NH73 311 aa9□□□□□ -0.97
SRP54-203ENST00000553544 DYNC2LI1Q8TCX1 351 aa9□□□□□ -0.97
SRP54-203ENST00000553544 GIMAP1Q8WWP7 306 aa9□□□□□ -0.97
SRP54-203ENST00000553544 AIFM2Q9BRQ8 373 aa9□□□□□ -0.97
SRP54-203ENST00000553544 C6orf62Q9GZU0 229 aaPredicted RBP9□□□□□ -0.97
SRP54-203ENST00000553544 ZNF430Q9H8G1 570 aaPredicted RBP9□□□□□ -0.97
SRP54-203ENST00000553544 CCL28Q9NRJ3 127 aa9□□□□□ -0.97
SRP54-203ENST00000553544 ZNF355PQ9NSJ1 428 aa9□□□□□ -0.97
SRP54-203ENST00000553544 EHFQ9NZC4 300 aa9□□□□□ -0.97
SRP54-203ENST00000553544 RBMY1BA6NDE4 496 aaKnown RBP8.99□□□□□ -0.97
SRP54-203ENST00000553544 RBMY1EA6NEQ0 496 aaKnown RBP8.99□□□□□ -0.97
SRP54-203ENST00000553544 RBMXL2O75526 392 aaKnown RBP8.99□□□□□ -0.97
SRP54-203ENST00000553544 RBMY1DP0C7P1 496 aaKnown RBP8.99□□□□□ -0.97
SRP54-203ENST00000553544 NAT1P18440 290 aa8.99□□□□□ -0.97
SRP54-203ENST00000553544 S100A5P33763 92 aa8.99□□□□□ -0.97
SRP54-203ENST00000553544 DYRK1AQ13627 763 aa8.99□□□□□ -0.97
SRP54-203ENST00000553544 OR2B11Q5JQS5 317 aa8.99□□□□□ -0.97
SRP54-203ENST00000553544 GTSCR1Q86UQ5 136 aa8.99□□□□□ -0.97
SRP54-203ENST00000553544 SNX29P2Q8IUI4 249 aa8.99□□□□□ -0.97
SRP54-203ENST00000553544 PUSL1Q8N0Z8 303 aaKnown RBP8.99□□□□□ -0.97
SRP54-203ENST00000553544 GPX8Q8TED1 209 aa8.99□□□□□ -0.97
SRP54-203ENST00000553544 SECTM1Q8WVN6 248 aa8.99□□□□□ -0.97
SRP54-203ENST00000553544 TCTEX1D2Q8WW35 142 aa8.99□□□□□ -0.97
SRP54-203ENST00000553544 DIRAS2Q96HU8 199 aa8.99□□□□□ -0.97
SRP54-203ENST00000553544 USMG5Q96IX5 58 aa8.99□□□□□ -0.97
SRP54-203ENST00000553544 GPHA2Q96T91 129 aa8.99□□□□□ -0.97
SRP54-203ENST00000553544 DCUN1D5Q9BTE7 237 aa8.99□□□□□ -0.97
SRP54-203ENST00000553544 RANGRFQ9HD47 186 aaPredicted RBP8.99□□□□□ -0.97
SRP54-203ENST00000553544 TAS2R8Q9NYW2 309 aa8.99□□□□□ -0.97
SRP54-203ENST00000553544 TRBV9A0A0B4J1U6 114 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 C13orf42A0A1B0GVH6 325 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 MEIS3P1A6NDR6 274 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 OR2A4O95047 310 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 FCER2P06734 321 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 OR9G9P0C7N8 305 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 APELAP0DMC3 54 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 TSPAN5P62079 268 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 LPCAT3Q6P1A2 487 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 ZNF343Q6P1L6 599 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 DHRS11Q6UWP2 260 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 CMTM1Q8IZ96 169 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 VKORC1L1Q8N0U8 176 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms