RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 HBE1P02100 147 aa12.57□□□□□ -0.4
ABCD4-218ENST00000553486 SPCS3P61009 180 aa12.57□□□□□ -0.4
ABCD4-218ENST00000553486 SERF2P84101 59 aa12.57□□□□□ -0.4
ABCD4-218ENST00000553486 GUCA2BQ16661 112 aa12.57□□□□□ -0.4
ABCD4-218ENST00000553486 C1orf229Q6ZS94 237 aaPredicted RBP12.57□□□□□ -0.4
ABCD4-218ENST00000553486 SSX9Q7RTT3 188 aa12.57□□□□□ -0.4
ABCD4-218ENST00000553486 PUSL1Q8N0Z8 303 aaKnown RBP12.57□□□□□ -0.4
ABCD4-218ENST00000553486 OR10P1Q8NGE3 313 aa12.57□□□□□ -0.4
ABCD4-218ENST00000553486 OR52E5Q8NH55 327 aa12.57□□□□□ -0.4
ABCD4-218ENST00000553486 ZDHHC16Q969W1 377 aa12.57□□□□□ -0.4
ABCD4-218ENST00000553486 PINX1Q96BK5 328 aaKnown RBP12.57□□□□□ -0.4
ABCD4-218ENST00000553486 RAB39BQ96DA2 213 aa12.57□□□□□ -0.4
ABCD4-218ENST00000553486 ZNF714Q96N38 554 aa12.57□□□□□ -0.4
ABCD4-218ENST00000553486 ZNF251Q9BRH9 671 aa12.57□□□□□ -0.4
ABCD4-218ENST00000553486 WDR61Q9GZS3 305 aaKnown RBP12.57□□□□□ -0.4
ABCD4-218ENST00000553486 KAAG1Q9UBP8 84 aa12.57□□□□□ -0.4
ABCD4-218ENST00000553486 PRRC2AP48634 2157 aaKnown RBP12.56□□□□□ -0.4
ABCD4-218ENST00000553486 ACANP16112 2415 aa12.56□□□□□ -0.4
ABCD4-218ENST00000553486 MMP23AO75900 390 aa12.56□□□□□ -0.4
ABCD4-218ENST00000553486 RPP30P78346 268 aaKnown RBP12.56□□□□□ -0.4
ABCD4-218ENST00000553486 ZNF273Q14593 569 aa12.56□□□□□ -0.4
ABCD4-218ENST00000553486 HEPN1Q6WQI6 88 aa12.56□□□□□ -0.4
ABCD4-218ENST00000553486 TMUB1Q9BVT8 246 aa12.56□□□□□ -0.4
ABCD4-218ENST00000553486 SCRT1Q9BWW7 348 aa12.56□□□□□ -0.4
ABCD4-218ENST00000553486 HIPK2Q9H2X6 1198 aa12.56□□□□□ -0.4
ABCD4-218ENST00000553486 SMDT1Q9H4I9 107 aa12.56□□□□□ -0.4
ABCD4-218ENST00000553486 KPTNQ9Y664 436 aa12.56□□□□□ -0.4
ABCD4-218ENST00000553486 A6NNC1 897 aa12.55□□□□□ -0.4
ABCD4-218ENST00000553486 FAM157AC9JC47 383 aa12.55□□□□□ -0.4
ABCD4-218ENST00000553486 CD99P14209 185 aa12.55□□□□□ -0.4
ABCD4-218ENST00000553486 HFEQ30201 348 aa12.55□□□□□ -0.4
ABCD4-218ENST00000553486 TMEM200BQ69YZ2 307 aa12.55□□□□□ -0.4
ABCD4-218ENST00000553486 LYPD2Q6UXB3 125 aa12.55□□□□□ -0.4
ABCD4-218ENST00000553486 MUC15Q8N387 334 aa12.55□□□□□ -0.4
ABCD4-218ENST00000553486 H1FXQ92522 213 aaKnown RBP12.55□□□□□ -0.4
ABCD4-218ENST00000553486 RSG1Q9BU20 258 aa12.55□□□□□ -0.4
ABCD4-218ENST00000553486 TMEM147Q9BVK8 224 aa12.55□□□□□ -0.4
ABCD4-218ENST00000553486 TMEM140Q9NV12 185 aa12.55□□□□□ -0.4
ABCD4-218ENST00000553486 C9JQL5 133 aa12.55□□□□□ -0.4
ABCD4-218ENST00000553486 DNASE2O00115 360 aaPredicted RBP12.55□□□□□ -0.4
ABCD4-218ENST00000553486 OR2B8PP59922 312 aa12.55□□□□□ -0.4
ABCD4-218ENST00000553486 GNB2P62879 340 aa12.55□□□□□ -0.4
ABCD4-218ENST00000553486 RELBQ01201 579 aa12.55□□□□□ -0.4
ABCD4-218ENST00000553486 ZNF672Q499Z4 452 aaPredicted RBP12.55□□□□□ -0.4
ABCD4-218ENST00000553486 SPSB3Q6PJ21 355 aa12.55□□□□□ -0.4
ABCD4-218ENST00000553486 ZNF383Q8NA42 475 aa12.55□□□□□ -0.4
ABCD4-218ENST00000553486 TAF15Q92804 592 aaKnown RBP eCLIP12.55□□□□□ -0.4
ABCD4-218ENST00000553486 TIMM9Q9Y5J7 89 aa12.55□□□□□ -0.4
ABCD4-218ENST00000553486 UBE2L5PA0A1B0GUS4 154 aa12.54□□□□□ -0.4
ABCD4-218ENST00000553486 A0A1B0GV50 99 aa12.54□□□□□ -0.4
ABCD4-218ENST00000553486 PMS2P5A8MQ11 134 aa12.54□□□□□ -0.4
ABCD4-218ENST00000553486 DVL1O14640 695 aa12.54□□□□□ -0.4
ABCD4-218ENST00000553486 TSPAN4O14817 238 aa12.54□□□□□ -0.4
ABCD4-218ENST00000553486 GPR37O15354 613 aa12.54□□□□□ -0.4
ABCD4-218ENST00000553486 HRASP01112 189 aa12.54□□□□□ -0.4
ABCD4-218ENST00000553486 PPT1P50897 306 aa12.54□□□□□ -0.4
ABCD4-218ENST00000553486 KRTAP21-3Q3LHN1 58 aa12.54□□□□□ -0.4
ABCD4-218ENST00000553486 PDLIM3Q53GG5 364 aaPredicted RBP12.54□□□□□ -0.4
ABCD4-218ENST00000553486 SPINK9Q5DT21 86 aa12.54□□□□□ -0.4
ABCD4-218ENST00000553486 SFT2D1Q8WV19 159 aa12.54□□□□□ -0.4
ABCD4-218ENST00000553486 RBMXL1Q96E39 390 aaKnown RBP12.54□□□□□ -0.4
ABCD4-218ENST00000553486 KIAA1456Q9P272 454 aa12.54□□□□□ -0.4
ABCD4-218ENST00000553486 FLNAP21333 2647 aaKnown RBP12.54□□□□□ -0.4
ABCD4-218ENST00000553486 CCL3L1P16619 93 aa12.53□□□□□ -0.4
ABCD4-218ENST00000553486 RTL8BQ17RB0 113 aa12.53□□□□□ -0.4
ABCD4-218ENST00000553486 DHRS7BQ6IAN0 325 aaPredicted RBP12.53□□□□□ -0.4
ABCD4-218ENST00000553486 ZNF429Q86V71 674 aa12.53□□□□□ -0.4
ABCD4-218ENST00000553486 VKORC1L1Q8N0U8 176 aa12.53□□□□□ -0.4
ABCD4-218ENST00000553486 RHOVQ96L33 236 aa12.53□□□□□ -0.4
ABCD4-218ENST00000553486 TRAV1-1A0A0B4J248 108 aa12.53□□□□□ -0.4
ABCD4-218ENST00000553486 RBFOX3A6NFN3 312 aa12.53□□□□□ -0.4
ABCD4-218ENST00000553486 SIAH2O43255 324 aa12.53□□□□□ -0.4
ABCD4-218ENST00000553486 FCN3O75636 299 aa12.53□□□□□ -0.4
ABCD4-218ENST00000553486 TAGLNQ01995 201 aaKnown RBP12.53□□□□□ -0.4
ABCD4-218ENST00000553486 POU2AF1Q16633 256 aa12.53□□□□□ -0.4
ABCD4-218ENST00000553486 CENPVQ7Z7K6 275 aaPredicted RBP12.53□□□□□ -0.4
ABCD4-218ENST00000553486 AIFM2Q9BRQ8 373 aa12.53□□□□□ -0.4
ABCD4-218ENST00000553486 SLC35B3Q9H1N7 401 aa12.53□□□□□ -0.4
ABCD4-218ENST00000553486 CTSZQ9UBR2 303 aa12.53□□□□□ -0.4
ABCD4-218ENST00000553486 TET2Q6N021 2002 aaPredicted RBP12.52□□□□□ -0.4
ABCD4-218ENST00000553486 C15orf62A8K5M9 175 aa12.52□□□□□ -0.41
ABCD4-218ENST00000553486 NUPL2O15504 423 aaKnown RBP12.52□□□□□ -0.41
ABCD4-218ENST00000553486 CT45A6P0DMU7 189 aa12.52□□□□□ -0.41
ABCD4-218ENST00000553486 CT45A5P0DMU8 189 aa12.52□□□□□ -0.41
ABCD4-218ENST00000553486 CT45A7P0DMV0 189 aa12.52□□□□□ -0.41
ABCD4-218ENST00000553486 CCL20P78556 96 aa12.52□□□□□ -0.41
ABCD4-218ENST00000553486 TMEM41BQ5BJD5 291 aa12.52□□□□□ -0.41
ABCD4-218ENST00000553486 ZNF833PQ6ZTB9 187 aa12.52□□□□□ -0.41
ABCD4-218ENST00000553486 TMEM204Q9BSN7 226 aa12.52□□□□□ -0.41
ABCD4-218ENST00000553486 HEYLQ9NQ87 328 aaPredicted RBP12.52□□□□□ -0.41
ABCD4-218ENST00000553486 RPRMQ9NS64 109 aa12.52□□□□□ -0.41
ABCD4-218ENST00000553486 SLC35D1Q9NTN3 355 aa12.52□□□□□ -0.41
ABCD4-218ENST00000553486 TRAV3A0A0B4J244 114 aa12.51□□□□□ -0.41
ABCD4-218ENST00000553486 FAM74A7A6NL05 159 aa12.51□□□□□ -0.41
ABCD4-218ENST00000553486 C15orf61A6NNL5 157 aa12.51□□□□□ -0.41
ABCD4-218ENST00000553486 FSTL3O95633 263 aa12.51□□□□□ -0.41
ABCD4-218ENST00000553486 F12P00748 615 aaPredicted RBP12.51□□□□□ -0.41
ABCD4-218ENST00000553486 ARG1P05089 322 aa12.51□□□□□ -0.41
ABCD4-218ENST00000553486 LOXP28300 417 aaPredicted RBP12.51□□□□□ -0.41
ABCD4-218ENST00000553486 PPOXP50336 477 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms