RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 ZNF431Q8TF32 576 aaPredicted RBP7.78□□□□□ -1.16
TMEM260-204ENST00000553335 RBPMSQ93062 196 aaKnown RBP7.78□□□□□ -1.16
TMEM260-204ENST00000553335 RRNAD1Q96FB5 475 aaKnown RBP7.78□□□□□ -1.16
TMEM260-204ENST00000553335 TMEM56Q96MV1 263 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 PHB2Q99623 299 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 MOB4Q9Y3A3 225 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 TMEM56-RWDD3S4R434 201 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 NAV3Q8IVL0 2385 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 CSPG4Q6UVK1 2322 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 A0A0B4J2A0 478 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 FAM181BA6NEQ2 426 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 DNAJC9-AS1A6NH13 148 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 MARCH11A6NNE9 402 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 SNRPGP15A8MWD9 76 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 CLDN34H7C241 214 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 RRHO14718 337 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 FGF16O43320 207 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 CREBL2O60519 120 aaPredicted RBP7.77□□□□□ -1.17
TMEM260-204ENST00000553335 NDUFA3O95167 84 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 KRASP01116 189 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 UBE2KP61086 200 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 PSG5Q15238 335 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 POU2AF1Q16633 256 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 SSX9Q7RTT3 188 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 H2BFWTQ7Z2G1 175 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 TMEM219Q86XT9 240 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 SELENOHQ8IZQ5 122 aaKnown RBP7.77□□□□□ -1.17
TMEM260-204ENST00000553335 C12orf45Q8N5I9 185 aaPredicted RBP7.77□□□□□ -1.17
TMEM260-204ENST00000553335 LRTM2Q8N967 370 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 TEX45Q8NA69 505 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 OR52B4Q8NGK2 314 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 RITA1Q96K30 269 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 CLUHP3Q96NS8 147 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 RASL11BQ9BPW5 248 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 SEC22CQ9BRL7 303 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 METTL1Q9UBP6 276 aaKnown RBP7.77□□□□□ -1.17
TMEM260-204ENST00000553335 SHPKQ9UHJ6 478 aa7.77□□□□□ -1.17
TMEM260-204ENST00000553335 SRRM4A7MD48 611 aaKnown RBP7.76□□□□□ -1.17
TMEM260-204ENST00000553335 TRIM77I1YAP6 450 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 SLC25A17O43808 307 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 OR2A4O95047 310 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 IGKV1-39P01597 117 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 IGLV2-23P01705 113 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 IGKV1D-39P04432 117 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 VDAC1P21796 283 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 CNTFRP26992 372 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 G6PCP35575 357 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 F2RL1P55085 397 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 TATDN3Q17R31 274 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 ANKRD55Q3KP44 614 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 OR4A47Q6IF82 309 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 FAM219AQ8IW50 185 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 CADM3Q8N126 398 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 SLC35G3Q8N808 338 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 OR4A5Q8NH83 315 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 MITD1Q8WV92 249 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 LSM10Q969L4 123 aaKnown RBP7.76□□□□□ -1.17
TMEM260-204ENST00000553335 RBMXL1Q96E39 390 aaKnown RBP7.76□□□□□ -1.17
TMEM260-204ENST00000553335 SEC22AQ96IW7 307 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 OR2A7Q96R45 310 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 CHIAQ9BZP6 476 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 FBXL15Q9H469 300 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 PLSCR3Q9NRY6 295 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 TMEM140Q9NV12 185 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 BET1LQ9NYM9 111 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 TMED3Q9Y3Q3 217 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 NF1P21359 2839 aa7.76□□□□□ -1.17
TMEM260-204ENST00000553335 C7orf66A4D0T2 115 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 GPR137BO60478 399 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 SNAPC5O75971 98 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 KBTBD11O94819 623 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 IFNA21P01568 189 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 CRYBA1P05813 215 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 CRYGBP07316 175 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 RNASE1P07998 156 aaKnown RBP7.75□□□□□ -1.17
TMEM260-204ENST00000553335 SAA1P0DJI8 122 aaPredicted RBP7.75□□□□□ -1.17
TMEM260-204ENST00000553335 RPL15P61313 204 aaKnown RBP7.75□□□□□ -1.17
TMEM260-204ENST00000553335 UBA52P62987 128 aaKnown RBP7.75□□□□□ -1.17
TMEM260-204ENST00000553335 C5orf64Q2M2E5 130 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 FBLN7Q53RD9 439 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 LIN54Q6MZP7 749 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 LYZL2Q7Z4W2 148 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 PPP1R27Q86WC6 154 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 MMD2Q8IY49 270 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 VKORC1L1Q8N0U8 176 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 PUSL1Q8N0Z8 303 aaKnown RBP7.75□□□□□ -1.17
TMEM260-204ENST00000553335 FAM71E2Q8N5Q1 922 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 C5orf56Q8N8D9 126 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 Q8N9W7 124 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 UXS1Q8NBZ7 420 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 LHFPL5Q8TAF8 219 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 TMEM167AQ8TBQ9 72 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 DUX5Q96PT3 197 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 RANBP3Q9H6Z4 567 aaPredicted RBP7.75□□□□□ -1.17
TMEM260-204ENST00000553335 ESM1Q9NQ30 184 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 SIGLEC9Q9Y336 463 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 MMP24Q9Y5R2 645 aa7.75□□□□□ -1.17
TMEM260-204ENST00000553335 NIPBLQ6KC79 2804 aaeCLIP7.74□□□□□ -1.17
TMEM260-204ENST00000553335 TLN2Q9Y4G6 2542 aa7.74□□□□□ -1.17
TMEM260-204ENST00000553335 UPK2O00526 184 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms