RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 SYS1Q8N2H4 156 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 SMIM20Q8N5G0 67 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 TCTEX1D1Q8N7M0 179 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 OR4K2Q8NGD2 314 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 OR52E4Q8NGH9 312 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 OR5D13Q8NGL4 314 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 OR1S2Q8NGQ3 325 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 OR2A1Q8NGT9 310 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 FAM110BQ8TC76 370 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 GPR119Q8TDV5 335 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 C15orf40Q8WUR7 153 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 SPRYD4Q8WW59 207 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-218ENST00000553309 EMG1Q92979 244 aaKnown RBP3.81□□□□□ -1.8
ATXN3-218ENST00000553309 GALMQ96C23 342 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 CNRIP1Q96F85 164 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-218ENST00000553309 IMP4Q96G21 291 aaKnown RBP3.81□□□□□ -1.8
ATXN3-218ENST00000553309 DIRAS2Q96HU8 199 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 FAM218AQ96MZ4 157 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 ZFP3Q96NJ6 502 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 YPEL4Q96NS1 127 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 ADAT1Q9BUB4 502 aaKnown RBP3.81□□□□□ -1.8
ATXN3-218ENST00000553309 C20orf24Q9BUV8 137 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 ST6GALNAC5Q9BVH7 336 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 MAP1LC3CQ9BXW4 147 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 LINC00470Q9BZP3 86 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 ARL6Q9H0F7 186 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 RBKSQ9H477 322 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 EGLN3Q9H6Z9 239 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 WDR76Q9H967 626 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 PATZ1Q9HBE1 687 aaKnown RBP3.81□□□□□ -1.8
ATXN3-218ENST00000553309 BET1LQ9NYM9 111 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 CLCF1Q9UBD9 225 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 SS18L2Q9UHA2 77 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 VPREB3Q9UKI3 123 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 EMCNQ9ULC0 261 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 FOXJ3Q9UPW0 622 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 WIPI2Q9Y4P8 454 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 CSDC2Q9Y534 153 aaKnown RBP3.81□□□□□ -1.8
ATXN3-218ENST00000553309 DNAH1Q9P2D7 4330 aa3.81□□□□□ -1.8
ATXN3-218ENST00000553309 COL7A1Q02388 2944 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 TRBV4-1A0A0J9YWV2 114 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 C7orf77A4D0Y5 90 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 HIST1H2BKO60814 126 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 ETHE1O95571 254 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 CDS2O95674 445 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 IFNA1P01562 189 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 C1QAP02745 245 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 OPN1SWP03999 348 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 RLN1P04808 185 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 TYMSP04818 313 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 ISG15P05161 165 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 HIST1H2BJP06899 126 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 CD14P08571 375 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 LAMP1P11279 417 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 PGAM2P15259 253 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 CELP19835 753 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 ACHEP22303 614 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 HIST1H2BOP23527 126 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 AGTR1P30556 359 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 HIST1H2BBP33778 126 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 TGFBR1P36897 503 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 CFHR2P36980 270 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 MDH2P40926 338 aaKnown RBP3.8□□□□□ -1.8
ATXN3-218ENST00000553309 RPS10P46783 165 aaKnown RBP3.8□□□□□ -1.8
ATXN3-218ENST00000553309 POLR2HP52434 150 aaKnown RBP3.8□□□□□ -1.8
ATXN3-218ENST00000553309 HIST1H2BDP58876 126 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 TAS2R30P59541 319 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 S100A10P60903 97 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 HIST1H2BCP62807 126 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 GNG3P63215 75 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 BSPH1Q075Z2 132 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 ST3GAL3Q11203 375 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 ST3GAL4Q11206 333 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 MLLT11Q13015 90 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-218ENST00000553309 PSG5Q15238 335 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 HIST2H2BEQ16778 126 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 GSG1Q2KHT4 349 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-218ENST00000553309 NCBP2-AS2Q69YL0 99 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 OR2T2Q6IF00 324 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 LEG1Q6P5S2 330 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 SBSNQ6UWP8 590 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 TMEM182Q6ZP80 229 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-218ENST00000553309 VN1R4Q7Z5H5 301 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 C20orf196Q8IYI0 205 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 DND1Q8IYX4 353 aaKnown RBP3.8□□□□□ -1.8
ATXN3-218ENST00000553309 CDRT4Q8N9R6 151 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 CHST4Q8NCG5 386 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 OR4D11Q8NGI4 311 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 OR9G4Q8NGQ1 327 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 OR56B4Q8NH76 319 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 ZPLD1Q8TCW7 415 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 HIST1H2BHQ93079 126 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 TMEM106AQ96A25 262 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 TM4SF19Q96DZ7 209 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 VSTM2LQ96N03 204 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 GPR82Q96P67 336 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 MBOAT4Q96T53 435 aa3.8□□□□□ -1.8
ATXN3-218ENST00000553309 TBX5Q99593 518 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms