RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 SERPINB10P48595 397 aa3.3□□□□□ -1.88
SCFD1-208ENST00000553278 RAB13P51153 203 aa3.3□□□□□ -1.88
SCFD1-208ENST00000553278 TAS2R20P59543 309 aa3.3□□□□□ -1.88
SCFD1-208ENST00000553278 HTR4Q13639 388 aa3.3□□□□□ -1.88
SCFD1-208ENST00000553278 CST6Q15828 149 aa3.3□□□□□ -1.88
SCFD1-208ENST00000553278 ZNF141Q15928 474 aa3.3□□□□□ -1.88
SCFD1-208ENST00000553278 KRTAP25-1Q3LHN0 102 aa3.3□□□□□ -1.88
SCFD1-208ENST00000553278 Q6ZS49 121 aa3.3□□□□□ -1.88
SCFD1-208ENST00000553278 SPATA12Q7Z6I5 190 aa3.3□□□□□ -1.88
SCFD1-208ENST00000553278 OR52L1Q8NGH7 329 aa3.3□□□□□ -1.88
SCFD1-208ENST00000553278 OR13C8Q8NGS7 320 aa3.3□□□□□ -1.88
SCFD1-208ENST00000553278 ACOT12Q8WYK0 555 aa3.3□□□□□ -1.88
SCFD1-208ENST00000553278 TSPAN32Q96QS1 320 aa3.3□□□□□ -1.88
SCFD1-208ENST00000553278 RSPO3Q9BXY4 272 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-208ENST00000553278 ATG2BQ96BY7 2078 aa3.3□□□□□ -1.88
SCFD1-208ENST00000553278 ADAMTSL1Q8N6G6 1762 aa3.3□□□□□ -1.88
SCFD1-208ENST00000553278 PRR14LQ5THK1 2151 aa3.29□□□□□ -1.88
SCFD1-208ENST00000553278 A0A0J9YY10 115 aa3.29□□□□□ -1.88
SCFD1-208ENST00000553278 LOC102725191A0A1B0GVB3 256 aa3.29□□□□□ -1.88
SCFD1-208ENST00000553278 A0A1B0GX78 115 aa3.29□□□□□ -1.88
SCFD1-208ENST00000553278 PIRO00625 290 aa3.29□□□□□ -1.88
SCFD1-208ENST00000553278 UBFD1O14562 309 aaKnown RBP3.29□□□□□ -1.88
SCFD1-208ENST00000553278 TP53I11O14683 189 aa3.29□□□□□ -1.88
SCFD1-208ENST00000553278 PSCAO43653 123 aa3.29□□□□□ -1.88
SCFD1-208ENST00000553278 IGHV1-69P01742 117 aa3.29□□□□□ -1.88
SCFD1-208ENST00000553278 SRP19P09132 144 aaKnown RBP3.29□□□□□ -1.88
SCFD1-208ENST00000553278 RAB14P61106 215 aa3.29□□□□□ -1.88
SCFD1-208ENST00000553278 ARHGAP11BQ3KRB8 267 aa3.29□□□□□ -1.88
SCFD1-208ENST00000553278 LYPD6Q86Y78 171 aa3.29□□□□□ -1.88
SCFD1-208ENST00000553278 PACRGLQ8N7B6 248 aa3.29□□□□□ -1.88
SCFD1-208ENST00000553278 GDPD1Q8N9F7 314 aa3.29□□□□□ -1.88
SCFD1-208ENST00000553278 GPR119Q8TDV5 335 aa3.29□□□□□ -1.88
SCFD1-208ENST00000553278 WDR61Q9GZS3 305 aaKnown RBP3.29□□□□□ -1.88
SCFD1-208ENST00000553278 RNASE7Q9H1E1 156 aaKnown RBP3.29□□□□□ -1.88
SCFD1-208ENST00000553278 UQCC1Q9NVA1 299 aa3.29□□□□□ -1.88
SCFD1-208ENST00000553278 R4GN34 69 aa3.29□□□□□ -1.88
SCFD1-208ENST00000553278 TMEM56-RWDD3S4R434 201 aa3.29□□□□□ -1.88
SCFD1-208ENST00000553278 KIF26AQ9ULI4 1882 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-208ENST00000553278 ROCK1Q13464 1354 aa3.28□□□□□ -1.88
SCFD1-208ENST00000553278 DSCAMO60469 2012 aa3.28□□□□□ -1.88
SCFD1-208ENST00000553278 C19orf71A6NCJ1 209 aa3.28□□□□□ -1.88
SCFD1-208ENST00000553278 C2orf74A8MZ97 194 aa3.28□□□□□ -1.88
SCFD1-208ENST00000553278 SERPINE1P05121 402 aa3.28□□□□□ -1.88
SCFD1-208ENST00000553278 TAS2R30P59541 319 aa3.28□□□□□ -1.88
SCFD1-208ENST00000553278 RPS20P60866 119 aaKnown RBP3.28□□□□□ -1.88
SCFD1-208ENST00000553278 RPL30P62888 115 aaKnown RBP3.28□□□□□ -1.88
SCFD1-208ENST00000553278 ZNF117Q03924 483 aa3.28□□□□□ -1.88
SCFD1-208ENST00000553278 LY6EQ16553 131 aa3.28□□□□□ -1.88
SCFD1-208ENST00000553278 TRIQKQ629K1 86 aa3.28□□□□□ -1.88
SCFD1-208ENST00000553278 CNEP1R1Q8N9A8 125 aa3.28□□□□□ -1.88
SCFD1-208ENST00000553278 MRPL30Q8TCC3 161 aaKnown RBP3.28□□□□□ -1.88
SCFD1-208ENST00000553278 GNPDA2Q8TDQ7 276 aa3.28□□□□□ -1.88
SCFD1-208ENST00000553278 OR8B2Q96RD0 313 aa3.28□□□□□ -1.88
SCFD1-208ENST00000553278 HOPXQ9BPY8 73 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-208ENST00000553278 HIGD2AQ9BW72 106 aa3.28□□□□□ -1.88
SCFD1-208ENST00000553278 TRABDQ9H4I3 376 aa3.28□□□□□ -1.88
SCFD1-208ENST00000553278 PAQR5Q9NXK6 330 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-208ENST00000553278 MARCOQ9UEW3 520 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-208ENST00000553278 MCTS1Q9ULC4 181 aaKnown RBP3.28□□□□□ -1.88
SCFD1-208ENST00000553278 HEY1Q9Y5J3 304 aa3.28□□□□□ -1.88
SCFD1-208ENST00000553278 ADGRL1O94910 1474 aa3.28□□□□□ -1.88
SCFD1-208ENST00000553278 RTL1A6NKG5 1358 aa3.27□□□□□ -1.89
SCFD1-208ENST00000553278 I3L521 148 aa3.27□□□□□ -1.89
SCFD1-208ENST00000553278 ATG12O94817 140 aa3.27□□□□□ -1.89
SCFD1-208ENST00000553278 CPSF4O95639 269 aaKnown RBP3.27□□□□□ -1.89
SCFD1-208ENST00000553278 IFNA1P01562 189 aa3.27□□□□□ -1.89
SCFD1-208ENST00000553278 CYBAP13498 195 aa3.27□□□□□ -1.89
SCFD1-208ENST00000553278 ZNF14P17017 642 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-208ENST00000553278 ZNF22P17026 224 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-208ENST00000553278 BLVRBP30043 206 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-208ENST00000553278 CD200P41217 278 aa3.27□□□□□ -1.89
SCFD1-208ENST00000553278 RBM11P57052 281 aaKnown RBP3.27□□□□□ -1.89
SCFD1-208ENST00000553278 DEFA1P59665 94 aa3.27□□□□□ -1.89
SCFD1-208ENST00000553278 KRTAP10-3P60369 221 aa3.27□□□□□ -1.89
SCFD1-208ENST00000553278 SSX8Q7RTT4 187 aa3.27□□□□□ -1.89
SCFD1-208ENST00000553278 ERMAPQ96PL5 475 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-208ENST00000553278 CCDC90BQ9GZT6 254 aa3.27□□□□□ -1.89
SCFD1-208ENST00000553278 FBXL12Q9NXK8 326 aa3.27□□□□□ -1.89
SCFD1-208ENST00000553278 COL18A1P39060 1754 aa3.27□□□□□ -1.89
SCFD1-208ENST00000553278 ABCC12Q96J65 1359 aa3.26□□□□□ -1.89
SCFD1-208ENST00000553278 TMEM269A0A1B0GVZ9 245 aa3.26□□□□□ -1.89
SCFD1-208ENST00000553278 A0A1W2PQ67 120 aa3.26□□□□□ -1.89
SCFD1-208ENST00000553278 OR5K4A6NMS3 321 aa3.26□□□□□ -1.89
SCFD1-208ENST00000553278 SOD1P00441 154 aa3.26□□□□□ -1.89
SCFD1-208ENST00000553278 S100A7P31151 101 aa3.26□□□□□ -1.89
SCFD1-208ENST00000553278 FXYD7P58549 80 aa3.26□□□□□ -1.89
SCFD1-208ENST00000553278 C12orf74Q32Q52 190 aa3.26□□□□□ -1.89
SCFD1-208ENST00000553278 C9orf64Q5T6V5 341 aa3.26□□□□□ -1.89
SCFD1-208ENST00000553278 WDR59Q6PJI9 974 aa3.26□□□□□ -1.89
SCFD1-208ENST00000553278 ZNF283Q8N7M2 679 aa3.26□□□□□ -1.89
SCFD1-208ENST00000553278 MRPL40Q9NQ50 206 aaKnown RBP3.26□□□□□ -1.89
SCFD1-208ENST00000553278 GPR179Q6PRD1 2367 aa3.26□□□□□ -1.89
SCFD1-208ENST00000553278 DOCK5Q9H7D0 1870 aa3.26□□□□□ -1.89
SCFD1-208ENST00000553278 LTBP4Q8N2S1 1624 aa3.26□□□□□ -1.89
SCFD1-208ENST00000553278 hCG_1818297A0A087WSY0 165 aa3.25□□□□□ -1.89
SCFD1-208ENST00000553278 EXOC1LA0A1B0GW35 172 aa3.25□□□□□ -1.89
SCFD1-208ENST00000553278 A8MT66 165 aa3.25□□□□□ -1.89
SCFD1-208ENST00000553278 C17orf98A8MV24 154 aa3.25□□□□□ -1.89
SCFD1-208ENST00000553278 NPYP01303 97 aa3.25□□□□□ -1.89
SCFD1-208ENST00000553278 RBP1P09455 135 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms