RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	KBTBD11	O94819	623 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	IGLV2-23	P01705	113 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	FGF2	P09038	288 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	LGALS7	P47929	136 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	KRTAP10-9	P60411	292 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	RAB14	P61106	215 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	TMEM267	Q0VDI3	215 aa	Predicted RBP	10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	VMA21	Q3ZAQ7	101 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	CLLU1	Q5K131	121 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	MINOS1	Q5TGZ0	78 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	TMEM14EP	Q6UXP3	125 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	LRRC75A-AS1	Q8N1F1	130 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	STPG2	Q8N412	459 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	UBAC2	Q8NBM4	344 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	OR1S2	Q8NGQ3	325 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	ZDHHC16	Q969W1	377 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	PSMG3-AS1	Q96PY0	264 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	CLCC1	Q96S66	551 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	ARV1	Q9H2C2	271 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	TCF19	Q9Y242	345 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	ZNF257	Q9Y2Q1	563 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	STRAP	Q9Y3F4	350 aa	Known RBP	10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	OR51B2	Q9Y5P1	312 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	MINOS1-NBL1	R4GNA1	71 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	USF3	Q68DE3	2245 aa		10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	FASN	P49327	2511 aa	Known RBP	10.25	□□□□□ -0.77
CACNB3-223	ENST00000552480	LRBA	P50851	2863 aa		10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	IGHV3-72	A0A0B4J1Y9	119 aa		10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	CST7	O76096	145 aa		10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	SCAF4	O95104	1147 aa	Known RBP	10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	USF1	P22415	310 aa	Predicted RBP	10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	DYNLT3	P51808	116 aa		10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	UBE2E1	P51965	193 aa		10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	HSPE1	P61604	102 aa	Known RBP	10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	PAX8	Q06710	450 aa		10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	DEFB113	Q30KQ7	82 aa		10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	SPINK9	Q5DT21	86 aa		10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	SPANXN5	Q5MJ07	72 aa		10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	LDLRAD2	Q5SZI1	272 aa		10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	OR5C1	Q8NGR4	320 aa		10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	TMEM167A	Q8TBQ9	72 aa		10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	RBMXL1	Q96E39	390 aa	Known RBP	10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	OR4C12	Q96R67	309 aa		10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	LPAR2	Q9HBW0	351 aa		10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	FKBP11	Q9NYL4	201 aa		10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	TBL2	Q9Y4P3	447 aa	Known RBP	10.24	□□□□□ -0.77
CACNB3-223	ENST00000552480	TIMM23	O14925	209 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	DFFB	O76075	338 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	METTL15P1	P0C7V9	234 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	CD1B	P29016	333 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	VDAC2	P45880	294 aa	Predicted RBP	10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	HOXA1	P49639	335 aa	Predicted RBP	10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	LGALS4	P56470	323 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	HBG1	P69891	147 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	HBG2	P69892	147 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	RPP30	P78346	268 aa	Known RBP	10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	HABP2	Q14520	560 aa	Predicted RBP	10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	ZNF266	Q14584	549 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	CLINT1	Q14677	625 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	EIF5AL1	Q6IS14	154 aa	Known RBP	10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	CCDC144NL	Q6NUI1	221 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	LHFPL4	Q7Z7J7	247 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	PDZD9	Q8IXQ8	264 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	TEX45	Q8NA69	505 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	OR5B3	Q8NH48	314 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	C1orf159	Q96HA4	380 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	TSNAX	Q99598	290 aa	Known RBP	10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	ATP5S	Q99766	215 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	RNF5	Q99942	180 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	GINS3	Q9BRX5	216 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	SLC25A32	Q9H2D1	315 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	HIPK2	Q9H2X6	1198 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	FLNC	Q14315	2725 aa		10.23	□□□□□ -0.77
CACNB3-223	ENST00000552480	TEX50	A0A1B0GTY4	177 aa		10.22	□□□□□ -0.77
CACNB3-223	ENST00000552480		A0A1W2PRD5	423 aa		10.22	□□□□□ -0.77
CACNB3-223	ENST00000552480		A0A1W2PRF3	423 aa		10.22	□□□□□ -0.77
CACNB3-223	ENST00000552480		A0A1W2PRM7	423 aa		10.22	□□□□□ -0.77
CACNB3-223	ENST00000552480	VENTX	O95231	258 aa		10.22	□□□□□ -0.77
CACNB3-223	ENST00000552480	RPL8	P62917	257 aa	Known RBP	10.22	□□□□□ -0.77
CACNB3-223	ENST00000552480	PRCD	Q00LT1	54 aa		10.22	□□□□□ -0.77
CACNB3-223	ENST00000552480	HAPLN4	Q86UW8	402 aa		10.22	□□□□□ -0.77
CACNB3-223	ENST00000552480	TMEM217	Q8N7C4	229 aa		10.22	□□□□□ -0.77
CACNB3-223	ENST00000552480	CFHR4	Q92496	578 aa		10.22	□□□□□ -0.77
CACNB3-223	ENST00000552480	RITA1	Q96K30	269 aa		10.22	□□□□□ -0.77
CACNB3-223	ENST00000552480	ENY2	Q9NPA8	101 aa		10.22	□□□□□ -0.77
CACNB3-223	ENST00000552480	HEYL	Q9NQ87	328 aa	Predicted RBP	10.22	□□□□□ -0.77
CACNB3-223	ENST00000552480	HILPDA	Q9Y5L2	63 aa		10.22	□□□□□ -0.77
CACNB3-223	ENST00000552480		A0A096LNT2	108 aa		10.21	□□□□□ -0.77
CACNB3-223	ENST00000552480	LINC00862	A6NCI5	91 aa		10.21	□□□□□ -0.77
CACNB3-223	ENST00000552480	C15orf62	A8K5M9	175 aa		10.21	□□□□□ -0.77
CACNB3-223	ENST00000552480	SLC25A17	O43808	307 aa		10.21	□□□□□ -0.77
CACNB3-223	ENST00000552480	ATP6V1G1	O75348	118 aa		10.21	□□□□□ -0.77
CACNB3-223	ENST00000552480	CRYGB	P07316	175 aa		10.21	□□□□□ -0.77
CACNB3-223	ENST00000552480	MSMB	P08118	114 aa		10.21	□□□□□ -0.77
CACNB3-223	ENST00000552480	NMB	P08949	121 aa		10.21	□□□□□ -0.77
CACNB3-223	ENST00000552480	SLC38A11	Q08AI6	406 aa		10.21	□□□□□ -0.77
CACNB3-223	ENST00000552480	ARL16	Q0P5N6	197 aa		10.21	□□□□□ -0.77
CACNB3-223	ENST00000552480	PSG5	Q15238	335 aa		10.21	□□□□□ -0.77
CACNB3-223	ENST00000552480	FAM74A1	Q5RGS3	127 aa		10.21	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms