RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 G3V318 75 aa14.66□□□□□ -0.06
DDX54-209ENST00000551912 ACTL6BO94805 426 aa14.66□□□□□ -0.06
DDX54-209ENST00000551912 SERPINE2P07093 398 aa14.66□□□□□ -0.06
DDX54-209ENST00000551912 CRIP2P52943 208 aaPredicted RBP14.66□□□□□ -0.06
DDX54-209ENST00000551912 SSBP2P81877 361 aaPredicted RBP14.66□□□□□ -0.06
DDX54-209ENST00000551912 TMEM267Q0VDI3 215 aaPredicted RBP14.66□□□□□ -0.06
DDX54-209ENST00000551912 TNXAQ16473 311 aa14.66□□□□□ -0.06
DDX54-209ENST00000551912 ECSCRQ19T08 205 aa14.66□□□□□ -0.06
DDX54-209ENST00000551912 OR4A47Q6IF82 309 aa14.66□□□□□ -0.06
DDX54-209ENST00000551912 TEX38Q6PEX7 206 aa14.66□□□□□ -0.06
DDX54-209ENST00000551912 OR4A5Q8NH83 315 aa14.66□□□□□ -0.06
DDX54-209ENST00000551912 FAM103A1Q9BTL3 118 aaKnown RBP14.66□□□□□ -0.06
DDX54-209ENST00000551912 WDR12Q9GZL7 423 aaKnown RBP14.66□□□□□ -0.06
DDX54-209ENST00000551912 BET1LQ9NYM9 111 aa14.66□□□□□ -0.06
DDX54-209ENST00000551912 VSIG4Q9Y279 399 aa14.66□□□□□ -0.06
DDX54-209ENST00000551912 TNCP24821 2201 aa14.65□□□□□ -0.06
DDX54-209ENST00000551912 TEX13DA0A0J9YY54 714 aaPredicted RBP14.65□□□□□ -0.06
DDX54-209ENST00000551912 MARCH11A6NNE9 402 aa14.65□□□□□ -0.06
DDX54-209ENST00000551912 B3GALNT1O75752 331 aa14.65□□□□□ -0.06
DDX54-209ENST00000551912 EGR2P11161 476 aaPredicted RBP14.65□□□□□ -0.06
DDX54-209ENST00000551912 CD40LGP29965 261 aa14.65□□□□□ -0.06
DDX54-209ENST00000551912 CD83Q01151 205 aa14.65□□□□□ -0.06
DDX54-209ENST00000551912 CFHR3Q02985 330 aa14.65□□□□□ -0.06
DDX54-209ENST00000551912 ZNF846Q147U1 533 aa14.65□□□□□ -0.06
DDX54-209ENST00000551912 TCTEX1D4Q5JR98 221 aa14.65□□□□□ -0.06
DDX54-209ENST00000551912 HIST2H2BDQ6DRA6 164 aa14.65□□□□□ -0.06
DDX54-209ENST00000551912 TP53RKQ96S44 253 aa14.65□□□□□ -0.06
DDX54-209ENST00000551912 CITED2Q99967 270 aaPredicted RBP14.65□□□□□ -0.06
DDX54-209ENST00000551912 SLC25A21Q9BQT8 299 aaPredicted RBP14.65□□□□□ -0.06
DDX54-209ENST00000551912 C7orf50Q9BRJ6 194 aaKnown RBP14.65□□□□□ -0.06
DDX54-209ENST00000551912 TMEM140Q9NV12 185 aa14.65□□□□□ -0.06
DDX54-209ENST00000551912 NUBP2Q9Y5Y2 271 aa14.65□□□□□ -0.06
DDX54-209ENST00000551912 TCRBV4S1A1TA0A5B7 111 aa14.64□□□□□ -0.07
DDX54-209ENST00000551912 KRASP01116 189 aa14.64□□□□□ -0.07
DDX54-209ENST00000551912 OPN1MWP04001 364 aa14.64□□□□□ -0.07
DDX54-209ENST00000551912 OPN1MW2P0DN77 364 aa14.64□□□□□ -0.07
DDX54-209ENST00000551912 OPN1MW3P0DN78 364 aa14.64□□□□□ -0.07
DDX54-209ENST00000551912 RPA2P15927 270 aa14.64□□□□□ -0.07
DDX54-209ENST00000551912 G6PCP35575 357 aa14.64□□□□□ -0.07
DDX54-209ENST00000551912 AKIRIN2Q53H80 203 aa14.64□□□□□ -0.07
DDX54-209ENST00000551912 UNQ5815/PRO19632Q6UWF5 114 aa14.64□□□□□ -0.07
DDX54-209ENST00000551912 LFNGQ8NES3 379 aa14.64□□□□□ -0.07
DDX54-209ENST00000551912 NAA60Q9H7X0 242 aa14.64□□□□□ -0.07
DDX54-209ENST00000551912 TET2Q6N021 2002 aaPredicted RBP14.63□□□□□ -0.07
DDX54-209ENST00000551912 CRYM-AS1A6NIL9 109 aa14.63□□□□□ -0.07
DDX54-209ENST00000551912 IGHG4P01861 327 aa14.63□□□□□ -0.07
DDX54-209ENST00000551912 ELANEP08246 267 aa14.63□□□□□ -0.07
DDX54-209ENST00000551912 PPIFP30405 207 aaKnown RBP14.63□□□□□ -0.07
DDX54-209ENST00000551912 MAS1LP35410 378 aa14.63□□□□□ -0.07
DDX54-209ENST00000551912 RPL8P62917 257 aaKnown RBP14.63□□□□□ -0.07
DDX54-209ENST00000551912 FOXE3Q13461 319 aa14.63□□□□□ -0.07
DDX54-209ENST00000551912 RBMS2Q15434 407 aaKnown RBP14.63□□□□□ -0.07
DDX54-209ENST00000551912 SP6Q3SY56 376 aa14.63□□□□□ -0.07
DDX54-209ENST00000551912 C19orf54Q5BKX5 351 aa14.63□□□□□ -0.07
DDX54-209ENST00000551912 MINDY2Q8NBR6 621 aa14.63□□□□□ -0.07
DDX54-209ENST00000551912 SRSF12Q8WXF0 261 aaKnown RBP14.63□□□□□ -0.07
DDX54-209ENST00000551912 PHB2Q99623 299 aa14.63□□□□□ -0.07
DDX54-209ENST00000551912 FOXA2Q9Y261 457 aaPredicted RBP14.63□□□□□ -0.07
DDX54-209ENST00000551912 A0A1W2PN81 502 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 M0QZ24 198 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 UPK2O00526 184 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 IGKV1-39P01597 117 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 IGKV1D-39P04432 117 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 IL6RP08887 468 aaPredicted RBP14.62□□□□□ -0.07
DDX54-209ENST00000551912 OR5AC1P0C628 307 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 UCP1P25874 307 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 CHRNA7P36544 502 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 CCR6P51684 374 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 TRIM16LQ309B1 348 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 CXorf66Q5JRM2 361 aaPredicted RBP14.62□□□□□ -0.07
DDX54-209ENST00000551912 KHDC1LQ5JSQ8 128 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 NDUFA11Q86Y39 141 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 SGPP2Q8IWX5 399 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 CADM3Q8N126 398 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 ADAD2Q8NCV1 583 aaKnown RBP14.62□□□□□ -0.07
DDX54-209ENST00000551912 TMEM230Q96A57 120 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 TMEM68Q96MH6 324 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 SPIN2AQ99865 258 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 SPIN2BQ9BPZ2 258 aa14.62□□□□□ -0.07
DDX54-209ENST00000551912 TSSC4Q9Y5U2 329 aaPredicted RBP14.62□□□□□ -0.07
DDX54-209ENST00000551912 TRAV3A0A0B4J244 114 aa14.61□□□□□ -0.07
DDX54-209ENST00000551912 MSGN1A6NI15 193 aa14.61□□□□□ -0.07
DDX54-209ENST00000551912 FGF2P09038 288 aa14.61□□□□□ -0.07
DDX54-209ENST00000551912 AKR1C4P17516 323 aa14.61□□□□□ -0.07
DDX54-209ENST00000551912 HLA-GP17693 338 aa14.61□□□□□ -0.07
DDX54-209ENST00000551912 C2orf68Q2NKX9 166 aa14.61□□□□□ -0.07
DDX54-209ENST00000551912 NSUN5P1Q3KNT7 163 aa14.61□□□□□ -0.07
DDX54-209ENST00000551912 C10orf55Q5SWW7 151 aa14.61□□□□□ -0.07
DDX54-209ENST00000551912 TMED4Q7Z7H5 227 aa14.61□□□□□ -0.07
DDX54-209ENST00000551912 SEC22AQ96IW7 307 aa14.61□□□□□ -0.07
DDX54-209ENST00000551912 TMEM222Q9H0R3 208 aa14.61□□□□□ -0.07
DDX54-209ENST00000551912 KCNIP3Q9Y2W7 256 aa14.61□□□□□ -0.07
DDX54-209ENST00000551912 PLA2G10O15496 165 aa14.6□□□□□ -0.07
DDX54-209ENST00000551912 ATG12O94817 140 aa14.6□□□□□ -0.07
DDX54-209ENST00000551912 IGLV1-40P01703 118 aa14.6□□□□□ -0.07
DDX54-209ENST00000551912 PSMB8P28062 276 aa14.6□□□□□ -0.07
DDX54-209ENST00000551912 RPL27AP46776 148 aaKnown RBP14.6□□□□□ -0.07
DDX54-209ENST00000551912 DHODHQ02127 395 aa14.6□□□□□ -0.07
DDX54-209ENST00000551912 TMEM65Q6PI78 240 aa14.6□□□□□ -0.07
DDX54-209ENST00000551912 H2BFWTQ7Z2G1 175 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms